RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 PRKCBP05771 671 aa14.51□□□□□ -0.09
COL6A1-201ENST00000361866 HNRNPCP07910 306 aaKnown RBP eCLIP14.51□□□□□ -0.09
COL6A1-201ENST00000361866 STAT5BP51692 787 aa14.51□□□□□ -0.09
COL6A1-201ENST00000361866 PRPSAP1Q14558 356 aa14.51□□□□□ -0.09
COL6A1-201ENST00000361866 IL31Q6EBC2 164 aa14.51□□□□□ -0.09
COL6A1-201ENST00000361866 ACAD11Q709F0 780 aa14.51□□□□□ -0.09
COL6A1-201ENST00000361866 ATG4CQ96DT6 458 aa14.51□□□□□ -0.09
COL6A1-201ENST00000361866 CYP39A1Q9NYL5 469 aa14.51□□□□□ -0.09
COL6A1-201ENST00000361866 NCANO14594 1321 aa14.51□□□□□ -0.09
COL6A1-201ENST00000361866 PABPN1LA6NDY0 278 aaKnown RBP14.51□□□□□ -0.09
COL6A1-201ENST00000361866 LCP1P13796 627 aa14.51□□□□□ -0.09
COL6A1-201ENST00000361866 ABCD1P33897 745 aa14.51□□□□□ -0.09
COL6A1-201ENST00000361866 TAP1Q03518 808 aa14.51□□□□□ -0.09
COL6A1-201ENST00000361866 PTK6Q13882 451 aa14.51□□□□□ -0.09
COL6A1-201ENST00000361866 ECHDC2Q86YB7 292 aa14.51□□□□□ -0.09
COL6A1-201ENST00000361866 HSD17B14Q9BPX1 270 aa14.51□□□□□ -0.09
COL6A1-201ENST00000361866 BFARQ9NZS9 450 aa14.51□□□□□ -0.09
COL6A1-201ENST00000361866 MYH2Q9UKX2 1941 aa14.51□□□□□ -0.09
COL6A1-201ENST00000361866 SUPT3HO75486 399 aa14.51□□□□□ -0.09
COL6A1-201ENST00000361866 VCPP55072 806 aaKnown RBP14.51□□□□□ -0.09
COL6A1-201ENST00000361866 MYL6P60660 151 aa14.51□□□□□ -0.09
COL6A1-201ENST00000361866 PHEXP78562 749 aa14.51□□□□□ -0.09
COL6A1-201ENST00000361866 MRPS9P82933 396 aaKnown RBP14.51□□□□□ -0.09
COL6A1-201ENST00000361866 DSG1Q02413 1049 aa14.51□□□□□ -0.09
COL6A1-201ENST00000361866 FAAP100Q0VG06 881 aa14.51□□□□□ -0.09
COL6A1-201ENST00000361866 RWDD4Q6NW29 188 aaKnown RBP14.51□□□□□ -0.09
COL6A1-201ENST00000361866 ABRAQ8N0Z2 381 aa14.51□□□□□ -0.09
COL6A1-201ENST00000361866 SIX6OS1Q8N1H7 587 aa14.51□□□□□ -0.09
COL6A1-201ENST00000361866 ARHGAP18Q8N392 663 aa14.51□□□□□ -0.09
COL6A1-201ENST00000361866 GABPB2Q8TAK5 448 aaPredicted RBP14.51□□□□□ -0.09
COL6A1-201ENST00000361866 BTBD10Q9BSF8 475 aa14.51□□□□□ -0.09
COL6A1-201ENST00000361866 NIF3L1Q9GZT8 377 aa14.51□□□□□ -0.09
COL6A1-201ENST00000361866 M0R2N6 131 aa14.5□□□□□ -0.09
COL6A1-201ENST00000361866 RPL7AP62424 266 aaKnown RBP14.5□□□□□ -0.09
COL6A1-201ENST00000361866 RPL10AP62906 217 aaKnown RBP14.5□□□□□ -0.09
COL6A1-201ENST00000361866 SGSM1Q2NKQ1 1148 aa14.5□□□□□ -0.09
COL6A1-201ENST00000361866 RARS2Q5T160 578 aaKnown RBP14.5□□□□□ -0.09
COL6A1-201ENST00000361866 FAM182AQ5T1J6 154 aa14.5□□□□□ -0.09
COL6A1-201ENST00000361866 IYDQ6PHW0 289 aa14.5□□□□□ -0.09
COL6A1-201ENST00000361866 ZNF572Q7Z3I7 529 aaPredicted RBP14.5□□□□□ -0.09
COL6A1-201ENST00000361866 CERS5Q8N5B7 392 aa14.5□□□□□ -0.09
COL6A1-201ENST00000361866 SNRNP27Q8WVK2 155 aaKnown RBP14.5□□□□□ -0.09
COL6A1-201ENST00000361866 TLCD1Q96CP7 247 aa14.5□□□□□ -0.09
COL6A1-201ENST00000361866 GMCL1Q96IK5 515 aa14.5□□□□□ -0.09
COL6A1-201ENST00000361866 LRRC19Q9H756 370 aa14.5□□□□□ -0.09
COL6A1-201ENST00000361866 RHBDL2Q9NX52 303 aa14.5□□□□□ -0.09
COL6A1-201ENST00000361866 KPNA7A9QM74 516 aa14.5□□□□□ -0.09
COL6A1-201ENST00000361866 PDE5AO76074 875 aa14.5□□□□□ -0.09
COL6A1-201ENST00000361866 GYS1P13807 737 aa14.5□□□□□ -0.09
COL6A1-201ENST00000361866 LACTB2Q53H82 288 aaPredicted RBP14.5□□□□□ -0.09
COL6A1-201ENST00000361866 FASTKD1Q53R41 847 aaKnown RBP14.5□□□□□ -0.09
COL6A1-201ENST00000361866 TTC39BQ5VTQ0 682 aaPredicted RBP14.5□□□□□ -0.09
COL6A1-201ENST00000361866 DPY19L2Q6NUT2 758 aa14.5□□□□□ -0.09
COL6A1-201ENST00000361866 LRRC74BQ6ZQY2 392 aa14.5□□□□□ -0.09
COL6A1-201ENST00000361866 CXorf38Q8TB03 319 aa14.5□□□□□ -0.09
COL6A1-201ENST00000361866 LRRN4Q8WUT4 740 aa14.5□□□□□ -0.09
COL6A1-201ENST00000361866 SLC24A2Q9UI40 661 aa14.5□□□□□ -0.09
COL6A1-201ENST00000361866 SNX9Q9Y5X1 595 aa14.5□□□□□ -0.09
COL6A1-201ENST00000361866 RPTORQ8N122 1335 aa14.5□□□□□ -0.09
COL6A1-201ENST00000361866 KBTBD13C9JR72 458 aa14.5□□□□□ -0.09
COL6A1-201ENST00000361866 ENTPD3O75355 529 aa14.5□□□□□ -0.09
COL6A1-201ENST00000361866 PEX5P50542 639 aa14.5□□□□□ -0.09
COL6A1-201ENST00000361866 SPDYCQ5MJ68 293 aa14.5□□□□□ -0.09
COL6A1-201ENST00000361866 TRIM67Q6ZTA4 783 aa14.5□□□□□ -0.09
COL6A1-201ENST00000361866 MYLK4Q86YV6 388 aaPredicted RBP14.5□□□□□ -0.09
COL6A1-201ENST00000361866 FAM71AQ8IYT1 594 aa14.5□□□□□ -0.09
COL6A1-201ENST00000361866 RNF148Q8N7C7 305 aa14.5□□□□□ -0.09
COL6A1-201ENST00000361866 UPF3AQ9H1J1 476 aaKnown RBP14.5□□□□□ -0.09
COL6A1-201ENST00000361866 PACSIN3Q9UKS6 424 aa14.5□□□□□ -0.09
COL6A1-201ENST00000361866 LRCH1Q9Y2L9 728 aa14.5□□□□□ -0.09
COL6A1-201ENST00000361866 CAMTA1Q9Y6Y1 1673 aa14.5□□□□□ -0.09
COL6A1-201ENST00000361866 GOLGA8QA0A0J9YX86 632 aa14.49□□□□□ -0.09
COL6A1-201ENST00000361866 FAM237BA0A1B0GVD1 139 aa14.49□□□□□ -0.09
COL6A1-201ENST00000361866 GOLGA8OA6NCC3 632 aa14.49□□□□□ -0.09
COL6A1-201ENST00000361866 GOLGA8NF8WBI6 632 aa14.49□□□□□ -0.09
COL6A1-201ENST00000361866 TAS2R40P59535 323 aa14.49□□□□□ -0.09
COL6A1-201ENST00000361866 SLC34A1Q06495 639 aa14.49□□□□□ -0.09
COL6A1-201ENST00000361866 KIF19Q2TAC6 998 aa14.49□□□□□ -0.09
COL6A1-201ENST00000361866 DALRD3Q5D0E6 543 aaKnown RBP14.49□□□□□ -0.09
COL6A1-201ENST00000361866 FAM163AQ96GL9 167 aaPredicted RBP14.49□□□□□ -0.09
COL6A1-201ENST00000361866 KREMEN1Q96MU8 473 aa14.49□□□□□ -0.09
COL6A1-201ENST00000361866 TIPINQ9BVW5 301 aa14.49□□□□□ -0.09
COL6A1-201ENST00000361866 RSAD1Q9HA92 442 aa14.49□□□□□ -0.09
COL6A1-201ENST00000361866 ANKEF1Q9NU02 776 aa14.49□□□□□ -0.09
COL6A1-201ENST00000361866 PAK5Q9P286 719 aa14.49□□□□□ -0.09
COL6A1-201ENST00000361866 ZNF70Q9UC06 446 aaPredicted RBP14.49□□□□□ -0.09
COL6A1-201ENST00000361866 DNAJC16Q9Y2G8 782 aa14.49□□□□□ -0.09
COL6A1-201ENST00000361866 C2CD2Q9Y426 696 aa14.49□□□□□ -0.09
COL6A1-201ENST00000361866 NUB1Q9Y5A7 615 aa14.49□□□□□ -0.09
COL6A1-201ENST00000361866 PDE4DIPQ5VU43 2346 aa14.49□□□□□ -0.09
COL6A1-201ENST00000361866 AFDNP55196 1824 aaKnown RBP14.49□□□□□ -0.09
COL6A1-201ENST00000361866 C2orf71A6NGG8 1288 aa14.49□□□□□ -0.09
COL6A1-201ENST00000361866 ZBBXA8MT70 800 aa14.49□□□□□ -0.09
COL6A1-201ENST00000361866 XPO1O14980 1071 aaKnown RBP14.49□□□□□ -0.09
COL6A1-201ENST00000361866 MGRN1O60291 552 aa14.49□□□□□ -0.09
COL6A1-201ENST00000361866 PSMD10O75832 226 aa14.49□□□□□ -0.09
COL6A1-201ENST00000361866 ATP4AP20648 1035 aa14.49□□□□□ -0.09
COL6A1-201ENST00000361866 RAP1GAPP47736 663 aa14.49□□□□□ -0.09
COL6A1-201ENST00000361866 COPAP53621 1224 aa14.49□□□□□ -0.09
COL6A1-201ENST00000361866 LAYNQ6UX15 382 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms