RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 MAP7D1Q3KQU3 841 aa13.29□□□□□ -0.28
VAMP1-201ENST00000361716 CMPK2Q5EBM0 449 aa13.29□□□□□ -0.28
VAMP1-201ENST00000361716 DCUN1D2Q6PH85 259 aa13.29□□□□□ -0.28
VAMP1-201ENST00000361716 ZCCHC23Q6ZST2 131 aa13.29□□□□□ -0.28
VAMP1-201ENST00000361716 TREML1Q86YW5 311 aa13.29□□□□□ -0.28
VAMP1-201ENST00000361716 XXYLT1Q8NBI6 393 aa13.29□□□□□ -0.28
VAMP1-201ENST00000361716 NT5C1BQ96P26 610 aa13.29□□□□□ -0.28
VAMP1-201ENST00000361716 CSRNP1Q96S65 589 aa13.29□□□□□ -0.28
VAMP1-201ENST00000361716 IFT122Q9HBG6 1241 aa13.29□□□□□ -0.28
VAMP1-201ENST00000361716 HSPBP1Q9NZL4 362 aa13.29□□□□□ -0.28
VAMP1-201ENST00000361716 LGALS13Q9UHV8 139 aa13.29□□□□□ -0.28
VAMP1-201ENST00000361716 AGTPBP1Q9UPW5 1226 aa13.29□□□□□ -0.28
VAMP1-201ENST00000361716 MTO1Q9Y2Z2 717 aaKnown RBP13.29□□□□□ -0.28
VAMP1-201ENST00000361716 C15orf38-AP3S2A0A0A6YYH1 394 aa13.29□□□□□ -0.28
VAMP1-201ENST00000361716 TFPTP0C1Z6 253 aa13.29□□□□□ -0.28
VAMP1-201ENST00000361716 CHRNA5P30532 468 aa13.29□□□□□ -0.28
VAMP1-201ENST00000361716 AQP5P55064 265 aa13.29□□□□□ -0.28
VAMP1-201ENST00000361716 CAV1Q03135 178 aa13.29□□□□□ -0.28
VAMP1-201ENST00000361716 GAD2Q05329 585 aa13.29□□□□□ -0.28
VAMP1-201ENST00000361716 ALCAMQ13740 583 aa13.29□□□□□ -0.28
VAMP1-201ENST00000361716 CTC1Q2NKJ3 1217 aa13.29□□□□□ -0.28
VAMP1-201ENST00000361716 MROH7Q68CQ1 1323 aa13.29□□□□□ -0.28
VAMP1-201ENST00000361716 BCORQ6W2J9 1755 aa13.29□□□□□ -0.28
VAMP1-201ENST00000361716 ARPINQ7Z6K5 226 aa13.29□□□□□ -0.28
VAMP1-201ENST00000361716 RSPH3Q86UC2 560 aa13.29□□□□□ -0.28
VAMP1-201ENST00000361716 ZNF510Q9Y2H8 683 aa13.29□□□□□ -0.28
VAMP1-201ENST00000361716 DCAF8L1A6NGE4 600 aa13.29□□□□□ -0.28
VAMP1-201ENST00000361716 PRR5-ARHGAP8B1AHC4 643 aa13.29□□□□□ -0.28
VAMP1-201ENST00000361716 IPO5O00410 1097 aaKnown RBP13.29□□□□□ -0.28
VAMP1-201ENST00000361716 TP73O15350 636 aa13.29□□□□□ -0.28
VAMP1-201ENST00000361716 FOXD2O60548 495 aaPredicted RBP13.29□□□□□ -0.28
VAMP1-201ENST00000361716 NCF2P19878 526 aaPredicted RBP13.29□□□□□ -0.28
VAMP1-201ENST00000361716 MFAP3P55082 362 aa13.29□□□□□ -0.28
VAMP1-201ENST00000361716 ARHGAP8P85298 464 aa13.29□□□□□ -0.28
VAMP1-201ENST00000361716 PTK6Q13882 451 aa13.29□□□□□ -0.28
VAMP1-201ENST00000361716 CNGA3Q16281 694 aa13.29□□□□□ -0.28
VAMP1-201ENST00000361716 KBTBD12Q3ZCT8 623 aa13.29□□□□□ -0.28
VAMP1-201ENST00000361716 SEZ6Q53EL9 994 aa13.29□□□□□ -0.28
VAMP1-201ENST00000361716 RALGPS1Q5JS13 557 aa13.29□□□□□ -0.28
VAMP1-201ENST00000361716 SPOPLQ6IQ16 392 aa13.29□□□□□ -0.28
VAMP1-201ENST00000361716 CENPUQ71F23 418 aa13.29□□□□□ -0.28
VAMP1-201ENST00000361716 ZNF554Q86TJ5 538 aa13.29□□□□□ -0.28
VAMP1-201ENST00000361716 TMPRSS6Q8IU80 811 aa13.29□□□□□ -0.28
VAMP1-201ENST00000361716 PTCD3Q96EY7 689 aaKnown RBP13.29□□□□□ -0.28
VAMP1-201ENST00000361716 PAFAH2Q99487 392 aa13.29□□□□□ -0.28
VAMP1-201ENST00000361716 APOL6Q9BWW8 343 aa13.29□□□□□ -0.28
VAMP1-201ENST00000361716 SAE1Q9UBE0 346 aaPredicted RBP13.29□□□□□ -0.28
VAMP1-201ENST00000361716 SLC16A3O15427 465 aaKnown RBP13.28□□□□□ -0.28
VAMP1-201ENST00000361716 TOM1L1O75674 476 aa13.28□□□□□ -0.28
VAMP1-201ENST00000361716 RARBP10826 455 aa13.28□□□□□ -0.28
VAMP1-201ENST00000361716 PSMD6Q15008 389 aa13.28□□□□□ -0.28
VAMP1-201ENST00000361716 SLC10A5Q5PT55 438 aa13.28□□□□□ -0.28
VAMP1-201ENST00000361716 DUS1LQ6P1R4 473 aaKnown RBP13.28□□□□□ -0.28
VAMP1-201ENST00000361716 KLHDC10Q6PID8 442 aa13.28□□□□□ -0.28
VAMP1-201ENST00000361716 HAUS6Q7Z4H7 955 aa13.28□□□□□ -0.28
VAMP1-201ENST00000361716 CERS5Q8N5B7 392 aa13.28□□□□□ -0.28
VAMP1-201ENST00000361716 TAS1R2Q8TE23 839 aa13.28□□□□□ -0.28
VAMP1-201ENST00000361716 DGCR14Q96DF8 476 aaKnown RBP13.28□□□□□ -0.28
VAMP1-201ENST00000361716 FAM20AQ96MK3 541 aa13.28□□□□□ -0.28
VAMP1-201ENST00000361716 FAM213AQ9BRX8 229 aa13.28□□□□□ -0.28
VAMP1-201ENST00000361716 TMEM121Q9BTD3 319 aa13.28□□□□□ -0.28
VAMP1-201ENST00000361716 DCUN1D5Q9BTE7 237 aa13.28□□□□□ -0.28
VAMP1-201ENST00000361716 THSD7AQ9UPZ6 1657 aa13.28□□□□□ -0.28
VAMP1-201ENST00000361716 RBM47A0AV96 593 aaKnown RBP13.28□□□□□ -0.28
VAMP1-201ENST00000361716 RAG1P15918 1043 aa13.28□□□□□ -0.28
VAMP1-201ENST00000361716 IVDP26440 423 aa13.28□□□□□ -0.28
VAMP1-201ENST00000361716 MLH1P40692 756 aa13.28□□□□□ -0.28
VAMP1-201ENST00000361716 RGS2P41220 211 aa13.28□□□□□ -0.28
VAMP1-201ENST00000361716 CHN2P52757 468 aa13.28□□□□□ -0.28
VAMP1-201ENST00000361716 FOLH1Q04609 750 aa13.28□□□□□ -0.28
VAMP1-201ENST00000361716 TRMT5Q32P41 509 aaKnown RBP13.28□□□□□ -0.28
VAMP1-201ENST00000361716 NADK2Q4G0N4 442 aa13.28□□□□□ -0.28
VAMP1-201ENST00000361716 PPP6R3Q5H9R7 873 aaPredicted RBP13.28□□□□□ -0.28
VAMP1-201ENST00000361716 RHBDF2Q6PJF5 856 aa13.28□□□□□ -0.28
VAMP1-201ENST00000361716 TRIML2Q8N7C3 387 aa13.28□□□□□ -0.28
VAMP1-201ENST00000361716 ETNPPLQ8TBG4 499 aa13.28□□□□□ -0.28
VAMP1-201ENST00000361716 ACER1Q8TDN7 264 aa13.28□□□□□ -0.28
VAMP1-201ENST00000361716 DENND1AQ8TEH3 1009 aa13.28□□□□□ -0.28
VAMP1-201ENST00000361716 ZNF668Q96K58 619 aaPredicted RBP13.28□□□□□ -0.28
VAMP1-201ENST00000361716 TEKT3Q9BXF9 490 aa13.28□□□□□ -0.28
VAMP1-201ENST00000361716 GLT8D2Q9H1C3 349 aa13.28□□□□□ -0.28
VAMP1-201ENST00000361716 DNPEPQ9ULA0 475 aa13.28□□□□□ -0.28
VAMP1-201ENST00000361716 LAMB2P55268 1798 aa13.28□□□□□ -0.28
VAMP1-201ENST00000361716 TRIM43BA6NCK2 446 aa13.27□□□□□ -0.28
VAMP1-201ENST00000361716 A8MXQ7 604 aa13.27□□□□□ -0.28
VAMP1-201ENST00000361716 F5H423 210 aaPredicted RBP13.27□□□□□ -0.28
VAMP1-201ENST00000361716 PIK3CDO00329 1044 aa13.27□□□□□ -0.28
VAMP1-201ENST00000361716 TRAFD1O14545 582 aaPredicted RBP13.27□□□□□ -0.28
VAMP1-201ENST00000361716 XPOTO43592 962 aaKnown RBP13.27□□□□□ -0.28
VAMP1-201ENST00000361716 C6orf222P0C671 652 aaPredicted RBP13.27□□□□□ -0.28
VAMP1-201ENST00000361716 CRKP46108 304 aa13.27□□□□□ -0.28
VAMP1-201ENST00000361716 DCTN2Q13561 401 aaKnown RBP13.27□□□□□ -0.28
VAMP1-201ENST00000361716 TMCO4Q5TGY1 634 aa13.27□□□□□ -0.28
VAMP1-201ENST00000361716 ARMCX6Q7L4S7 300 aa13.27□□□□□ -0.28
VAMP1-201ENST00000361716 DHDDSQ86SQ9 333 aa13.27□□□□□ -0.28
VAMP1-201ENST00000361716 BBOF1Q8ND07 529 aa13.27□□□□□ -0.28
VAMP1-201ENST00000361716 UNC45AQ9H3U1 944 aa13.27□□□□□ -0.28
VAMP1-201ENST00000361716 IL1RAPL1Q9NZN1 696 aa13.27□□□□□ -0.28
VAMP1-201ENST00000361716 WRAP73Q9P2S5 460 aaPredicted RBP13.27□□□□□ -0.28
VAMP1-201ENST00000361716 HSFX1Q9UBD0 423 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms