RNA–Protein interactions for RNA: ENST00000360668.7

MAP1LC3A-201, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3A, Length 1,574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-201ENST00000360668 COLGALT2Q8IYK4 626 aa22.18■■□□□ 1.14
MAP1LC3A-201ENST00000360668 ABI1Q8IZP0 508 aa22.18■■□□□ 1.14
MAP1LC3A-201ENST00000360668 CRIPAKQ8N1N5 446 aa22.18■■□□□ 1.14
MAP1LC3A-201ENST00000360668 FEZF2Q8TBJ5 459 aa22.18■■□□□ 1.14
MAP1LC3A-201ENST00000360668 BTBD6Q96KE9 485 aa22.18■■□□□ 1.14
MAP1LC3A-201ENST00000360668 CAPZA3Q96KX2 299 aa22.18■■□□□ 1.14
MAP1LC3A-201ENST00000360668 CPXM1Q96SM3 734 aa22.18■■□□□ 1.14
MAP1LC3A-201ENST00000360668 PSMB7Q99436 277 aa22.18■■□□□ 1.14
MAP1LC3A-201ENST00000360668 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.17■■□□□ 1.14
MAP1LC3A-201ENST00000360668 TMEM110-MUSTN1A8MSY1 372 aa22.17■■□□□ 1.14
MAP1LC3A-201ENST00000360668 DDHD2O94830 711 aa22.17■■□□□ 1.14
MAP1LC3A-201ENST00000360668 COMTP21964 271 aa22.17■■□□□ 1.14
MAP1LC3A-201ENST00000360668 CXCR5P32302 372 aa22.17■■□□□ 1.14
MAP1LC3A-201ENST00000360668 SLC1A1P43005 524 aa22.17■■□□□ 1.14
MAP1LC3A-201ENST00000360668 RNASELQ05823 741 aaKnown RBP22.17■■□□□ 1.14
MAP1LC3A-201ENST00000360668 ZNF268Q14587 947 aaPredicted RBP22.17■■□□□ 1.14
MAP1LC3A-201ENST00000360668 TTC30AQ86WT1 665 aa22.17■■□□□ 1.14
MAP1LC3A-201ENST00000360668 NPAS4Q8IUM7 802 aa22.17■■□□□ 1.14
MAP1LC3A-201ENST00000360668 ANKRD52Q8NB46 1076 aa22.17■■□□□ 1.14
MAP1LC3A-201ENST00000360668 IPO4Q8TEX9 1081 aaKnown RBP22.17■■□□□ 1.14
MAP1LC3A-201ENST00000360668 STK32AQ8WU08 396 aa22.17■■□□□ 1.14
MAP1LC3A-201ENST00000360668 FAM193BQ96PV7 902 aaPredicted RBP22.17■■□□□ 1.14
MAP1LC3A-201ENST00000360668 SYNCQ9H7C4 482 aa22.17■■□□□ 1.14
MAP1LC3A-201ENST00000360668 DDX43Q9NXZ2 648 aaKnown RBP22.17■■□□□ 1.14
MAP1LC3A-201ENST00000360668 KCNK3O14649 394 aa22.16■■□□□ 1.14
MAP1LC3A-201ENST00000360668 DDX3YO15523 660 aaKnown RBP22.16■■□□□ 1.14
MAP1LC3A-201ENST00000360668 PTPN1P18031 435 aaKnown RBP22.16■■□□□ 1.14
MAP1LC3A-201ENST00000360668 DNA2P51530 1060 aa22.16■■□□□ 1.14
MAP1LC3A-201ENST00000360668 BCAT1P54687 386 aa22.16■■□□□ 1.14
MAP1LC3A-201ENST00000360668 PTPROQ16827 1216 aa22.16■■□□□ 1.14
MAP1LC3A-201ENST00000360668 PPP1R15BQ5SWA1 713 aa22.16■■□□□ 1.14
MAP1LC3A-201ENST00000360668 CYP4A22Q5TCH4 519 aa22.16■■□□□ 1.14
MAP1LC3A-201ENST00000360668 CNKSR3Q6P9H4 555 aa22.16■■□□□ 1.14
MAP1LC3A-201ENST00000360668 ZNF572Q7Z3I7 529 aaPredicted RBP22.16■■□□□ 1.14
MAP1LC3A-201ENST00000360668 DEFB128Q7Z7B8 93 aa22.16■■□□□ 1.14
MAP1LC3A-201ENST00000360668 METTL23Q86XA0 190 aa22.16■■□□□ 1.14
MAP1LC3A-201ENST00000360668 SUSD3Q96L08 255 aa22.16■■□□□ 1.14
MAP1LC3A-201ENST00000360668 CASD1Q96PB1 797 aa22.16■■□□□ 1.14
MAP1LC3A-201ENST00000360668 TSC2P49815 1807 aa22.16■■□□□ 1.14
MAP1LC3A-201ENST00000360668 TMEM191CA6NGB0 347 aa22.16■■□□□ 1.14
MAP1LC3A-201ENST00000360668 B4GALT3O60512 393 aa22.16■■□□□ 1.14
MAP1LC3A-201ENST00000360668 PROSCO94903 275 aa22.16■■□□□ 1.14
MAP1LC3A-201ENST00000360668 ERBB2P04626 1255 aa22.16■■□□□ 1.14
MAP1LC3A-201ENST00000360668 TUBBP07437 444 aa22.16■■□□□ 1.14
MAP1LC3A-201ENST00000360668 CCDC130P13994 396 aa22.16■■□□□ 1.14
MAP1LC3A-201ENST00000360668 BRCC3P46736 316 aa22.16■■□□□ 1.14
MAP1LC3A-201ENST00000360668 PSMC1P62191 440 aaKnown RBP22.16■■□□□ 1.14
MAP1LC3A-201ENST00000360668 BST2Q10589 180 aaKnown RBP22.16■■□□□ 1.14
MAP1LC3A-201ENST00000360668 ELF2Q15723 593 aa22.16■■□□□ 1.14
MAP1LC3A-201ENST00000360668 CCDC181Q5TID7 509 aa22.16■■□□□ 1.14
MAP1LC3A-201ENST00000360668 PRPF38BQ5VTL8 546 aaKnown RBP22.16■■□□□ 1.14
MAP1LC3A-201ENST00000360668 XYLT1Q86Y38 959 aa22.16■■□□□ 1.14
MAP1LC3A-201ENST00000360668 SLC35F5Q8WV83 523 aa22.16■■□□□ 1.14
MAP1LC3A-201ENST00000360668 CD101Q93033 1021 aa22.16■■□□□ 1.14
MAP1LC3A-201ENST00000360668 HNRNPABQ99729 332 aaKnown RBP22.16■■□□□ 1.14
MAP1LC3A-201ENST00000360668 LPIN3Q9BQK8 851 aa22.16■■□□□ 1.14
MAP1LC3A-201ENST00000360668 SELENOOQ9BVL4 669 aa22.16■■□□□ 1.14
MAP1LC3A-201ENST00000360668 CDH9Q9ULB4 789 aa22.16■■□□□ 1.14
MAP1LC3A-201ENST00000360668 MICAL3Q7RTP6 2002 aa22.15■■□□□ 1.14
MAP1LC3A-201ENST00000360668 SPOPO43791 374 aa22.15■■□□□ 1.14
MAP1LC3A-201ENST00000360668 TYMPP19971 482 aa22.15■■□□□ 1.14
MAP1LC3A-201ENST00000360668 CTNNA2P26232 953 aa22.15■■□□□ 1.14
MAP1LC3A-201ENST00000360668 PCSK1P29120 753 aa22.15■■□□□ 1.14
MAP1LC3A-201ENST00000360668 MAN1A1P33908 653 aa22.15■■□□□ 1.14
MAP1LC3A-201ENST00000360668 PAFAH1B1P43034 410 aa22.15■■□□□ 1.14
MAP1LC3A-201ENST00000360668 SNX16P57768 344 aa22.15■■□□□ 1.14
MAP1LC3A-201ENST00000360668 ITIH3Q06033 890 aa22.15■■□□□ 1.14
MAP1LC3A-201ENST00000360668 CFAP221Q4G0U5 840 aa22.15■■□□□ 1.14
MAP1LC3A-201ENST00000360668 PAN2Q504Q3 1202 aaKnown RBP22.15■■□□□ 1.14
MAP1LC3A-201ENST00000360668 UBL4BQ8N7F7 174 aa22.15■■□□□ 1.14
MAP1LC3A-201ENST00000360668 MCRS1Q96EZ8 462 aa22.15■■□□□ 1.14
MAP1LC3A-201ENST00000360668 SYT15Q9BQS2 421 aa22.15■■□□□ 1.14
MAP1LC3A-201ENST00000360668 SLC4A5Q9BY07 1137 aa22.15■■□□□ 1.14
MAP1LC3A-201ENST00000360668 MRPL9Q9BYD2 267 aaKnown RBP22.15■■□□□ 1.14
MAP1LC3A-201ENST00000360668 TRIM7Q9C029 511 aa22.15■■□□□ 1.14
MAP1LC3A-201ENST00000360668 IP6K2Q9UHH9 426 aa22.15■■□□□ 1.14
MAP1LC3A-201ENST00000360668 TIMM13Q9Y5L4 95 aaPredicted RBP22.15■■□□□ 1.14
MAP1LC3A-201ENST00000360668 SIGLEC16A6NMB1 481 aa22.14■■□□□ 1.13
MAP1LC3A-201ENST00000360668 PDE2AO00408 941 aaPredicted RBP22.14■■□□□ 1.13
MAP1LC3A-201ENST00000360668 ACAT1P24752 427 aaKnown RBP22.14■■□□□ 1.13
MAP1LC3A-201ENST00000360668 ADORA2BP29275 332 aa22.14■■□□□ 1.13
MAP1LC3A-201ENST00000360668 PDE4CQ08493 712 aa22.14■■□□□ 1.13
MAP1LC3A-201ENST00000360668 IKBKEQ14164 716 aa22.14■■□□□ 1.13
MAP1LC3A-201ENST00000360668 DCUN1D2Q6PH85 259 aa22.14■■□□□ 1.13
MAP1LC3A-201ENST00000360668 SLC2A14Q8TDB8 520 aa22.14■■□□□ 1.13
MAP1LC3A-201ENST00000360668 HTATIP2Q9BUP3 242 aa22.14■■□□□ 1.13
MAP1LC3A-201ENST00000360668 CYLDQ9NQC7 956 aa22.14■■□□□ 1.13
MAP1LC3A-201ENST00000360668 TJP2Q9UDY2 1190 aa22.14■■□□□ 1.13
MAP1LC3A-201ENST00000360668 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.14■■□□□ 1.13
MAP1LC3A-201ENST00000360668 PCDHB8Q9UN66 801 aa22.14■■□□□ 1.13
MAP1LC3A-201ENST00000360668 V9GYY5 206 aaPredicted RBP22.14■■□□□ 1.13
MAP1LC3A-201ENST00000360668 CCDC66A2RUB6 948 aa22.13■■□□□ 1.13
MAP1LC3A-201ENST00000360668 I3L4J1 428 aa22.13■■□□□ 1.13
MAP1LC3A-201ENST00000360668 KIAA0355O15063 1070 aa22.13■■□□□ 1.13
MAP1LC3A-201ENST00000360668 ATP2C2O75185 946 aa22.13■■□□□ 1.13
MAP1LC3A-201ENST00000360668 TIMP1P01033 207 aa22.13■■□□□ 1.13
MAP1LC3A-201ENST00000360668 ITGB1P05556 798 aa22.13■■□□□ 1.13
MAP1LC3A-201ENST00000360668 CTNNA1P35221 906 aaKnown RBP22.13■■□□□ 1.13
MAP1LC3A-201ENST00000360668 OR1G1P47890 313 aa22.13■■□□□ 1.13
MAP1LC3A-201ENST00000360668 KIAA0319Q5VV43 1072 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms