RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 ZNF589Q86UQ0 364 aaPredicted RBP9.64□□□□□ -0.87
VPS13A-203ENST00000360280 HS6ST3Q8IZP7 471 aa9.64□□□□□ -0.87
VPS13A-203ENST00000360280 GPR101Q96P66 508 aaPredicted RBP9.64□□□□□ -0.87
VPS13A-203ENST00000360280 LXNQ9BS40 222 aa9.64□□□□□ -0.87
VPS13A-203ENST00000360280 COMMD9Q9P000 198 aa9.64□□□□□ -0.87
VPS13A-203ENST00000360280 ITIH6Q6UXX5 1313 aa9.64□□□□□ -0.87
VPS13A-203ENST00000360280 ZBTB39O15060 712 aa9.64□□□□□ -0.87
VPS13A-203ENST00000360280 GRIK1P39086 918 aa9.64□□□□□ -0.87
VPS13A-203ENST00000360280 MACC1Q6ZN28 852 aa9.64□□□□□ -0.87
VPS13A-203ENST00000360280 C11orf74Q86VG3 221 aa9.64□□□□□ -0.87
VPS13A-203ENST00000360280 LRRC71Q8N4P6 559 aa9.64□□□□□ -0.87
VPS13A-203ENST00000360280 LCP1P13796 627 aa9.64□□□□□ -0.87
VPS13A-203ENST00000360280 DOK7Q18PE1 504 aa9.64□□□□□ -0.87
VPS13A-203ENST00000360280 RASGRP2Q7LDG7 609 aa9.64□□□□□ -0.87
VPS13A-203ENST00000360280 S100A13Q99584 98 aa9.64□□□□□ -0.87
VPS13A-203ENST00000360280 BCL2L14Q9BZR8 327 aa9.64□□□□□ -0.87
VPS13A-203ENST00000360280 CATSPERBQ9H7T0 1116 aa9.64□□□□□ -0.87
VPS13A-203ENST00000360280 KLHL1Q9NR64 748 aa9.64□□□□□ -0.87
VPS13A-203ENST00000360280 COMMD8Q9NX08 183 aa9.64□□□□□ -0.87
VPS13A-203ENST00000360280 SFI1A8K8P3 1242 aa9.64□□□□□ -0.87
VPS13A-203ENST00000360280 BMP10O95393 424 aa9.64□□□□□ -0.87
VPS13A-203ENST00000360280 ATP6AP1LQ52LC2 224 aa9.64□□□□□ -0.87
VPS13A-203ENST00000360280 NAPEPLDQ6IQ20 393 aa9.64□□□□□ -0.87
VPS13A-203ENST00000360280 TRAPPC11Q7Z392 1133 aa9.64□□□□□ -0.87
VPS13A-203ENST00000360280 VMP1Q96GC9 406 aa9.64□□□□□ -0.87
VPS13A-203ENST00000360280 ZNF624Q9P2J8 865 aaPredicted RBP9.64□□□□□ -0.87
VPS13A-203ENST00000360280 APEX2Q9UBZ4 518 aa9.64□□□□□ -0.87
VPS13A-203ENST00000360280 GLYCTKQ8IVS8 523 aa9.64□□□□□ -0.87
VPS13A-203ENST00000360280 CCDC36Q8IYA8 594 aa9.64□□□□□ -0.87
VPS13A-203ENST00000360280 ZCCHC7Q8N3Z6 543 aaKnown RBP9.64□□□□□ -0.87
VPS13A-203ENST00000360280 LRCH1Q9Y2L9 728 aa9.64□□□□□ -0.87
VPS13A-203ENST00000360280 TIMM44O43615 452 aa9.64□□□□□ -0.87
VPS13A-203ENST00000360280 CNTFP26441 200 aa9.64□□□□□ -0.87
VPS13A-203ENST00000360280 ARMC6Q6NXE6 501 aa9.64□□□□□ -0.87
VPS13A-203ENST00000360280 TPRKBQ9Y3C4 175 aa9.64□□□□□ -0.87
VPS13A-203ENST00000360280 MYL3P08590 195 aa9.64□□□□□ -0.87
VPS13A-203ENST00000360280 GSTM1P09488 218 aa9.64□□□□□ -0.87
VPS13A-203ENST00000360280 CHSY1Q86X52 802 aa9.64□□□□□ -0.87
VPS13A-203ENST00000360280 CDK20Q8IZL9 346 aa9.64□□□□□ -0.87
VPS13A-203ENST00000360280 TRMT6Q9UJA5 497 aaKnown RBP9.64□□□□□ -0.87
VPS13A-203ENST00000360280 RNF112Q9ULX5 631 aa9.64□□□□□ -0.87
VPS13A-203ENST00000360280 F8VZ95 297 aa9.64□□□□□ -0.87
VPS13A-203ENST00000360280 C21orf59P57076 290 aa9.64□□□□□ -0.87
VPS13A-203ENST00000360280 EID3Q8N140 333 aa9.64□□□□□ -0.87
VPS13A-203ENST00000360280 CDC42BPAQ5VT25 1732 aa9.64□□□□□ -0.87
VPS13A-203ENST00000360280 POTEMA6NI47 508 aa9.64□□□□□ -0.87
VPS13A-203ENST00000360280 ZFP1Q6P2D0 407 aa9.64□□□□□ -0.87
VPS13A-203ENST00000360280 FBXO42Q6P3S6 717 aa9.64□□□□□ -0.87
VPS13A-203ENST00000360280 TMEM179Q6ZVK1 233 aa9.64□□□□□ -0.87
VPS13A-203ENST00000360280 DOLKQ9UPQ8 538 aa9.64□□□□□ -0.87
VPS13A-203ENST00000360280 TRIM49D1C9J1S8 452 aa9.64□□□□□ -0.87
VPS13A-203ENST00000360280 ASNSP08243 561 aa9.64□□□□□ -0.87
VPS13A-203ENST00000360280 ZCCHC18P0CG32 403 aa9.64□□□□□ -0.87
VPS13A-203ENST00000360280 PAICSP22234 425 aaKnown RBP9.64□□□□□ -0.87
VPS13A-203ENST00000360280 SCTRP47872 440 aa9.64□□□□□ -0.87
VPS13A-203ENST00000360280 PLIN5Q00G26 463 aa9.64□□□□□ -0.87
VPS13A-203ENST00000360280 GRK3P35626 688 aa9.64□□□□□ -0.87
VPS13A-203ENST00000360280 PTGISQ16647 500 aa9.64□□□□□ -0.87
VPS13A-203ENST00000360280 RGS21Q2M5E4 152 aa9.64□□□□□ -0.87
VPS13A-203ENST00000360280 THOC7Q6I9Y2 204 aaKnown RBP9.64□□□□□ -0.87
VPS13A-203ENST00000360280 NANOGNBQ7Z5D8 188 aa9.64□□□□□ -0.87
VPS13A-203ENST00000360280 PABPC5Q96DU9 382 aaKnown RBP9.64□□□□□ -0.87
VPS13A-203ENST00000360280 STK33Q9BYT3 514 aa9.64□□□□□ -0.87
VPS13A-203ENST00000360280 NRDE2Q9H7Z3 1164 aa9.64□□□□□ -0.87
VPS13A-203ENST00000360280 RAD54BQ9Y620 910 aa9.64□□□□□ -0.87
VPS13A-203ENST00000360280 CEBPAP49715 358 aaPredicted RBP9.63□□□□□ -0.87
VPS13A-203ENST00000360280 IRAK1P51617 712 aa9.63□□□□□ -0.87
VPS13A-203ENST00000360280 APOL5Q9BWW9 433 aa9.63□□□□□ -0.87
VPS13A-203ENST00000360280 A0A1W2PRG6 482 aa9.63□□□□□ -0.87
VPS13A-203ENST00000360280 FDFT1P37268 417 aa9.63□□□□□ -0.87
VPS13A-203ENST00000360280 SNX17Q15036 470 aa9.63□□□□□ -0.87
VPS13A-203ENST00000360280 UXS1Q8NBZ7 420 aa9.63□□□□□ -0.87
VPS13A-203ENST00000360280 SLC35G2Q8TBE7 412 aa9.63□□□□□ -0.87
VPS13A-203ENST00000360280 FRMD8P1Q9BZ68 369 aaPredicted RBP9.63□□□□□ -0.87
VPS13A-203ENST00000360280 LGR6Q9HBX8 967 aa9.63□□□□□ -0.87
VPS13A-203ENST00000360280 RFX7Q2KHR2 1363 aa9.63□□□□□ -0.87
VPS13A-203ENST00000360280 HNRNPH1P31943 449 aaKnown RBP9.63□□□□□ -0.87
VPS13A-203ENST00000360280 CRKP46108 304 aa9.63□□□□□ -0.87
VPS13A-203ENST00000360280 KDM7AQ6ZMT4 941 aa9.63□□□□□ -0.87
VPS13A-203ENST00000360280 UNC45BQ8IWX7 931 aa9.63□□□□□ -0.87
VPS13A-203ENST00000360280 WWOXQ9NZC7 414 aa9.63□□□□□ -0.87
VPS13A-203ENST00000360280 HPGDP15428 266 aa9.63□□□□□ -0.87
VPS13A-203ENST00000360280 NFX1Q12986 1120 aaKnown RBP9.63□□□□□ -0.87
VPS13A-203ENST00000360280 ZNF284Q2VY69 593 aa9.63□□□□□ -0.87
VPS13A-203ENST00000360280 SEL1L3Q68CR1 1132 aa9.63□□□□□ -0.87
VPS13A-203ENST00000360280 LIN54Q6MZP7 749 aa9.63□□□□□ -0.87
VPS13A-203ENST00000360280 ZCWPW1Q9H0M4 648 aa9.63□□□□□ -0.87
VPS13A-203ENST00000360280 KLHL41O60662 606 aa9.63□□□□□ -0.87
VPS13A-203ENST00000360280 ARID5BQ14865 1188 aa9.63□□□□□ -0.87
VPS13A-203ENST00000360280 TLR7Q9NYK1 1049 aaKnown RBP9.63□□□□□ -0.87
VPS13A-203ENST00000360280 RAD51BO15315 384 aa9.63□□□□□ -0.87
VPS13A-203ENST00000360280 ZNF682O95780 498 aa9.63□□□□□ -0.87
VPS13A-203ENST00000360280 WEE2P0C1S8 567 aa9.63□□□□□ -0.87
VPS13A-203ENST00000360280 QARSP47897 775 aaKnown RBP9.63□□□□□ -0.87
VPS13A-203ENST00000360280 CDC42EP1Q00587 391 aa9.63□□□□□ -0.87
VPS13A-203ENST00000360280 LRRIQ1Q96JM4 1722 aa9.63□□□□□ -0.87
VPS13A-203ENST00000360280 SLC16A4O15374 487 aa9.63□□□□□ -0.87
VPS13A-203ENST00000360280 FASP25445 335 aa9.63□□□□□ -0.87
VPS13A-203ENST00000360280 RAB2AP61019 212 aa9.63□□□□□ -0.87
VPS13A-203ENST00000360280 PFKFB3Q16875 520 aaPredicted RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms