RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 SPDL1Q96EA4 605 aa13.35□□□□□ -0.27
GGPS1-202ENST00000358966 TMEM176AQ96HP8 235 aa13.35□□□□□ -0.27
GGPS1-202ENST00000358966 RNF14Q9UBS8 474 aa13.35□□□□□ -0.27
GGPS1-202ENST00000358966 GRAP2O75791 330 aa13.35□□□□□ -0.27
GGPS1-202ENST00000358966 ERBB2P04626 1255 aa13.35□□□□□ -0.27
GGPS1-202ENST00000358966 LMO2P25791 158 aa13.35□□□□□ -0.27
GGPS1-202ENST00000358966 IRF5Q13568 498 aa13.35□□□□□ -0.27
GGPS1-202ENST00000358966 ZBTB6Q15916 424 aa13.35□□□□□ -0.27
GGPS1-202ENST00000358966 RAB6CQ53S08 254 aa13.35□□□□□ -0.27
GGPS1-202ENST00000358966 PLEKHA7Q6IQ23 1121 aa13.35□□□□□ -0.27
GGPS1-202ENST00000358966 ALKAL1Q6UXT8 129 aa13.35□□□□□ -0.27
GGPS1-202ENST00000358966 SND1Q7KZF4 910 aaKnown RBP eCLIP13.35□□□□□ -0.27
GGPS1-202ENST00000358966 ERICH1Q86X53 443 aa13.35□□□□□ -0.27
GGPS1-202ENST00000358966 UBL4BQ8N7F7 174 aa13.35□□□□□ -0.27
GGPS1-202ENST00000358966 TMEM35BQ8NCS4 154 aa13.35□□□□□ -0.27
GGPS1-202ENST00000358966 HNRNPLLQ8WVV9 542 aaKnown RBP13.35□□□□□ -0.27
GGPS1-202ENST00000358966 ATG4AQ8WYN0 398 aa13.35□□□□□ -0.27
GGPS1-202ENST00000358966 RAB6CQ9H0N0 254 aa13.35□□□□□ -0.27
GGPS1-202ENST00000358966 DPH5Q9H2P9 285 aa13.35□□□□□ -0.27
GGPS1-202ENST00000358966 RABEP2Q9H5N1 569 aa13.35□□□□□ -0.27
GGPS1-202ENST00000358966 SPC25Q9HBM1 224 aa13.35□□□□□ -0.27
GGPS1-202ENST00000358966 DDX20Q9UHI6 824 aaKnown RBP13.35□□□□□ -0.27
GGPS1-202ENST00000358966 ERLIN1O75477 346 aa13.34□□□□□ -0.27
GGPS1-202ENST00000358966 ALDH1A1P00352 501 aa13.34□□□□□ -0.27
GGPS1-202ENST00000358966 GNAT1P11488 350 aa13.34□□□□□ -0.27
GGPS1-202ENST00000358966 CD52P31358 61 aa13.34□□□□□ -0.27
GGPS1-202ENST00000358966 PTGISQ16647 500 aa13.34□□□□□ -0.27
GGPS1-202ENST00000358966 LIN9Q5TKA1 542 aa13.34□□□□□ -0.27
GGPS1-202ENST00000358966 C9orf57Q5W0N0 161 aa13.34□□□□□ -0.27
GGPS1-202ENST00000358966 CCDC70Q6NSX1 233 aa13.34□□□□□ -0.27
GGPS1-202ENST00000358966 PAAF1Q9BRP4 392 aa13.34□□□□□ -0.27
GGPS1-202ENST00000358966 NEUROG2Q9H2A3 272 aa13.34□□□□□ -0.27
GGPS1-202ENST00000358966 AVENQ9NQS1 362 aaPredicted RBP13.34□□□□□ -0.27
GGPS1-202ENST00000358966 PTPN22Q9Y2R2 807 aa13.34□□□□□ -0.27
GGPS1-202ENST00000358966 PTGESO14684 152 aa13.34□□□□□ -0.27
GGPS1-202ENST00000358966 RNF40O75150 1001 aa13.34□□□□□ -0.27
GGPS1-202ENST00000358966 FGFR1P11362 822 aa13.34□□□□□ -0.27
GGPS1-202ENST00000358966 RFC1P35251 1148 aaPredicted RBP13.34□□□□□ -0.27
GGPS1-202ENST00000358966 TCEAL1Q15170 157 aa13.34□□□□□ -0.27
GGPS1-202ENST00000358966 SOWAHAQ2M3V2 549 aa13.34□□□□□ -0.27
GGPS1-202ENST00000358966 SMTNL2Q2TAL5 461 aa13.34□□□□□ -0.27
GGPS1-202ENST00000358966 PAN2Q504Q3 1202 aaKnown RBP13.34□□□□□ -0.27
GGPS1-202ENST00000358966 ZFYVE27Q5T4F4 411 aa13.34□□□□□ -0.27
GGPS1-202ENST00000358966 PPP1R26Q5T8A7 1209 aaPredicted RBP13.34□□□□□ -0.27
GGPS1-202ENST00000358966 DNAJC24Q6P3W2 148 aa13.34□□□□□ -0.27
GGPS1-202ENST00000358966 TTC27Q6P3X3 843 aa13.34□□□□□ -0.27
GGPS1-202ENST00000358966 DCUN1D2Q6PH85 259 aa13.34□□□□□ -0.27
GGPS1-202ENST00000358966 TRIM72Q6ZMU5 477 aa13.34□□□□□ -0.27
GGPS1-202ENST00000358966 OR6B3Q8NGW1 331 aa13.34□□□□□ -0.27
GGPS1-202ENST00000358966 HHIPL1Q96JK4 782 aa13.34□□□□□ -0.27
GGPS1-202ENST00000358966 RPS6KC1Q96S38 1066 aa13.34□□□□□ -0.27
GGPS1-202ENST00000358966 GAD1Q99259 594 aa13.34□□□□□ -0.27
GGPS1-202ENST00000358966 CHCHD3Q9NX63 227 aaKnown RBP13.34□□□□□ -0.27
GGPS1-202ENST00000358966 LMCD1Q9NZU5 365 aa13.34□□□□□ -0.27
GGPS1-202ENST00000358966 CNTN3Q9P232 1028 aa13.34□□□□□ -0.27
GGPS1-202ENST00000358966 TSPAN16Q9UKR8 245 aa13.34□□□□□ -0.27
GGPS1-202ENST00000358966 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.34□□□□□ -0.27
GGPS1-202ENST00000358966 PCDHA3Q9Y5H8 950 aa13.34□□□□□ -0.27
GGPS1-202ENST00000358966 CES2O00748 559 aa13.33□□□□□ -0.27
GGPS1-202ENST00000358966 MGEA5O60502 916 aa13.33□□□□□ -0.27
GGPS1-202ENST00000358966 RABGGTBP53611 331 aa13.33□□□□□ -0.27
GGPS1-202ENST00000358966 C1QBPQ07021 282 aaKnown RBP13.33□□□□□ -0.27
GGPS1-202ENST00000358966 TAF2Q6P1X5 1199 aa13.33□□□□□ -0.27
GGPS1-202ENST00000358966 SERINC5Q86VE9 423 aa13.33□□□□□ -0.27
GGPS1-202ENST00000358966 CCDC50Q8IVM0 306 aa13.33□□□□□ -0.27
GGPS1-202ENST00000358966 PRELID2Q8N945 189 aa13.33□□□□□ -0.27
GGPS1-202ENST00000358966 C1orf54Q8WWF1 131 aa13.33□□□□□ -0.27
GGPS1-202ENST00000358966 CCDC97Q96F63 343 aaPredicted RBP13.33□□□□□ -0.27
GGPS1-202ENST00000358966 SYNCQ9H7C4 482 aa13.33□□□□□ -0.27
GGPS1-202ENST00000358966 SRRDQ9UH36 339 aa13.33□□□□□ -0.27
GGPS1-202ENST00000358966 BARX2Q9UMQ3 279 aaPredicted RBP13.33□□□□□ -0.27
GGPS1-202ENST00000358966 RALGAPA2Q2PPJ7 1873 aa13.33□□□□□ -0.28
GGPS1-202ENST00000358966 PROSCO94903 275 aa13.33□□□□□ -0.28
GGPS1-202ENST00000358966 CCDC130P13994 396 aa13.33□□□□□ -0.28
GGPS1-202ENST00000358966 VEGFBP49765 207 aa13.33□□□□□ -0.28
GGPS1-202ENST00000358966 TSEN2Q8NCE0 465 aaKnown RBP13.33□□□□□ -0.28
GGPS1-202ENST00000358966 FEZF2Q8TBJ5 459 aa13.33□□□□□ -0.28
GGPS1-202ENST00000358966 RAET1EQ8TD07 263 aa13.33□□□□□ -0.28
GGPS1-202ENST00000358966 RNF25Q96BH1 459 aaPredicted RBP13.33□□□□□ -0.28
GGPS1-202ENST00000358966 SENP6Q9GZR1 1112 aaPredicted RBP13.33□□□□□ -0.28
GGPS1-202ENST00000358966 UPF3AQ9H1J1 476 aaKnown RBP13.33□□□□□ -0.28
GGPS1-202ENST00000358966 WNT8AQ9H1J5 351 aa13.33□□□□□ -0.28
GGPS1-202ENST00000358966 CENPHQ9H3R5 247 aa13.33□□□□□ -0.28
GGPS1-202ENST00000358966 METTL5Q9NRN9 209 aaKnown RBP13.33□□□□□ -0.28
GGPS1-202ENST00000358966 KLC4Q9NSK0 619 aa13.33□□□□□ -0.28
GGPS1-202ENST00000358966 PARVAQ9NVD7 372 aa13.33□□□□□ -0.28
GGPS1-202ENST00000358966 MIOSQ9NXC5 875 aa13.33□□□□□ -0.28
GGPS1-202ENST00000358966 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.33□□□□□ -0.28
GGPS1-202ENST00000358966 TIMM13Q9Y5L4 95 aaPredicted RBP13.33□□□□□ -0.28
GGPS1-202ENST00000358966 THSD7BQ9C0I4 1608 aa13.33□□□□□ -0.28
GGPS1-202ENST00000358966 RANBP2P49792 3224 aaKnown RBP13.33□□□□□ -0.28
GGPS1-202ENST00000358966 TCRBV5S1A1TA0A578 114 aa13.33□□□□□ -0.28
GGPS1-202ENST00000358966 MIF4GDA9UHW6 222 aaKnown RBP13.33□□□□□ -0.28
GGPS1-202ENST00000358966 M0QZ92 97 aa13.33□□□□□ -0.28
GGPS1-202ENST00000358966 DAPK3O43293 454 aa13.33□□□□□ -0.28
GGPS1-202ENST00000358966 MYBL1P10243 752 aa13.33□□□□□ -0.28
GGPS1-202ENST00000358966 RARAP10276 462 aa13.33□□□□□ -0.28
GGPS1-202ENST00000358966 ACAT1P24752 427 aaKnown RBP13.33□□□□□ -0.28
GGPS1-202ENST00000358966 ATICP31939 592 aa13.33□□□□□ -0.28
GGPS1-202ENST00000358966 PSMC1P62191 440 aaKnown RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms