RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 MTBPQ96DY7 904 aa6.88□□□□□ -1.31
CSDE1-203ENST00000358528 HEXIM2Q96MH2 286 aaKnown RBP6.88□□□□□ -1.31
CSDE1-203ENST00000358528 SLITRK1Q96PX8 696 aa6.88□□□□□ -1.31
CSDE1-203ENST00000358528 BTBD10Q9BSF8 475 aa6.88□□□□□ -1.31
CSDE1-203ENST00000358528 ZNF277Q9NRM2 450 aaPredicted RBP6.88□□□□□ -1.31
CSDE1-203ENST00000358528 ARAP2Q8WZ64 1704 aa6.88□□□□□ -1.31
CSDE1-203ENST00000358528 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.88□□□□□ -1.31
CSDE1-203ENST00000358528 KBTBD13C9JR72 458 aa6.88□□□□□ -1.31
CSDE1-203ENST00000358528 TRPA1O75762 1119 aa6.88□□□□□ -1.31
CSDE1-203ENST00000358528 APBA3O96018 575 aa6.88□□□□□ -1.31
CSDE1-203ENST00000358528 NOVP48745 357 aa6.88□□□□□ -1.31
CSDE1-203ENST00000358528 RGS7P49802 495 aa6.88□□□□□ -1.31
CSDE1-203ENST00000358528 HIRAP54198 1017 aaPredicted RBP6.88□□□□□ -1.31
CSDE1-203ENST00000358528 YARSP54577 528 aaKnown RBP6.88□□□□□ -1.31
CSDE1-203ENST00000358528 HADHBP55084 474 aaKnown RBP6.88□□□□□ -1.31
CSDE1-203ENST00000358528 MYL6P60660 151 aa6.88□□□□□ -1.31
CSDE1-203ENST00000358528 ROR1Q01973 937 aa6.88□□□□□ -1.31
CSDE1-203ENST00000358528 KBTBD12Q3ZCT8 623 aa6.88□□□□□ -1.31
CSDE1-203ENST00000358528 GALNTL6Q49A17 601 aa6.88□□□□□ -1.31
CSDE1-203ENST00000358528 DACT2Q5SW24 774 aa6.88□□□□□ -1.31
CSDE1-203ENST00000358528 NPNTQ6UXI9 565 aa6.88□□□□□ -1.31
CSDE1-203ENST00000358528 IZUMO2Q6UXV1 221 aa6.88□□□□□ -1.31
CSDE1-203ENST00000358528 TRIM72Q6ZMU5 477 aa6.88□□□□□ -1.31
CSDE1-203ENST00000358528 PCGF5Q86SE9 256 aa6.88□□□□□ -1.31
CSDE1-203ENST00000358528 NDUFAF2Q8N183 169 aa6.88□□□□□ -1.31
CSDE1-203ENST00000358528 MAB21L3Q8N8X9 362 aa6.88□□□□□ -1.31
CSDE1-203ENST00000358528 C12orf50Q8NA57 414 aaPredicted RBP6.88□□□□□ -1.31
CSDE1-203ENST00000358528 OR5B17Q8NGF7 314 aa6.88□□□□□ -1.31
CSDE1-203ENST00000358528 PIP4K2CQ8TBX8 421 aa6.88□□□□□ -1.31
CSDE1-203ENST00000358528 ADPGKQ9BRR6 497 aa6.88□□□□□ -1.31
CSDE1-203ENST00000358528 MOV10L1Q9BXT6 1211 aaKnown RBP6.88□□□□□ -1.31
CSDE1-203ENST00000358528 ZNF70Q9UC06 446 aaPredicted RBP6.88□□□□□ -1.31
CSDE1-203ENST00000358528 ZC3H7BQ9UGR2 993 aaKnown RBP6.88□□□□□ -1.31
CSDE1-203ENST00000358528 PACSIN3Q9UKS6 424 aa6.88□□□□□ -1.31
CSDE1-203ENST00000358528 CORO1CQ9ULV4 474 aaPredicted RBP6.88□□□□□ -1.31
CSDE1-203ENST00000358528 NUB1Q9Y5A7 615 aa6.88□□□□□ -1.31
CSDE1-203ENST00000358528 GJA3Q9Y6H8 435 aa6.88□□□□□ -1.31
CSDE1-203ENST00000358528 PAPPAQ13219 1627 aa6.88□□□□□ -1.31
CSDE1-203ENST00000358528 EXTL3O43909 919 aa6.88□□□□□ -1.31
CSDE1-203ENST00000358528 USP1O94782 785 aa6.88□□□□□ -1.31
CSDE1-203ENST00000358528 ATP6V1C1P21283 382 aa6.88□□□□□ -1.31
CSDE1-203ENST00000358528 SFNP31947 248 aa6.88□□□□□ -1.31
CSDE1-203ENST00000358528 AQP5P55064 265 aa6.88□□□□□ -1.31
CSDE1-203ENST00000358528 NOMO3P69849 1222 aa6.88□□□□□ -1.31
CSDE1-203ENST00000358528 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.88□□□□□ -1.31
CSDE1-203ENST00000358528 RABGAP1LQ5R372 815 aa6.88□□□□□ -1.31
CSDE1-203ENST00000358528 FNBP1LQ5T0N5 605 aa6.88□□□□□ -1.31
CSDE1-203ENST00000358528 NXNQ6DKJ4 435 aa6.88□□□□□ -1.31
CSDE1-203ENST00000358528 TATDN1Q6P1N9 297 aa6.88□□□□□ -1.31
CSDE1-203ENST00000358528 ANO5Q75V66 913 aa6.88□□□□□ -1.31
CSDE1-203ENST00000358528 MAP4K3Q8IVH8 894 aa6.88□□□□□ -1.31
CSDE1-203ENST00000358528 KATNAL2Q8IYT4 538 aa6.88□□□□□ -1.31
CSDE1-203ENST00000358528 TTC16Q8NEE8 873 aa6.88□□□□□ -1.31
CSDE1-203ENST00000358528 UBA3Q8TBC4 463 aa6.88□□□□□ -1.31
CSDE1-203ENST00000358528 TMC2Q8TDI7 906 aa6.88□□□□□ -1.31
CSDE1-203ENST00000358528 TUBB6Q9BUF5 446 aa6.88□□□□□ -1.31
CSDE1-203ENST00000358528 WASF2Q9Y6W5 498 aa6.88□□□□□ -1.31
CSDE1-203ENST00000358528 M0QYV0 167 aa6.87□□□□□ -1.31
CSDE1-203ENST00000358528 PRPSAP2O60256 369 aa6.87□□□□□ -1.31
CSDE1-203ENST00000358528 ENTPD3O75355 529 aa6.87□□□□□ -1.31
CSDE1-203ENST00000358528 CSDE1O75534 798 aaKnown RBP6.87□□□□□ -1.31
CSDE1-203ENST00000358528 DGAT1O75907 488 aa6.87□□□□□ -1.31
CSDE1-203ENST00000358528 CCNE2O96020 404 aa6.87□□□□□ -1.31
CSDE1-203ENST00000358528 ICAM1P05362 532 aa6.87□□□□□ -1.31
CSDE1-203ENST00000358528 TBXAS1P24557 533 aaPredicted RBP6.87□□□□□ -1.31
CSDE1-203ENST00000358528 IVDP26440 423 aa6.87□□□□□ -1.31
CSDE1-203ENST00000358528 HOXA10P31260 410 aaPredicted RBP6.87□□□□□ -1.31
CSDE1-203ENST00000358528 ABL2P42684 1182 aa6.87□□□□□ -1.31
CSDE1-203ENST00000358528 RANBP1P43487 201 aa6.87□□□□□ -1.31
CSDE1-203ENST00000358528 CDH8P55286 799 aa6.87□□□□□ -1.31
CSDE1-203ENST00000358528 MRPS9P82933 396 aaKnown RBP6.87□□□□□ -1.31
CSDE1-203ENST00000358528 GCNT1Q02742 428 aa6.87□□□□□ -1.31
CSDE1-203ENST00000358528 EMC2Q15006 297 aa6.87□□□□□ -1.31
CSDE1-203ENST00000358528 VPS72Q15906 364 aa6.87□□□□□ -1.31
CSDE1-203ENST00000358528 SLC45A4Q5BKX6 768 aa6.87□□□□□ -1.31
CSDE1-203ENST00000358528 ANO7Q6IWH7 933 aa6.87□□□□□ -1.31
CSDE1-203ENST00000358528 C7orf31Q8N865 590 aa6.87□□□□□ -1.31
CSDE1-203ENST00000358528 PPP4R1Q8TF05 950 aa6.87□□□□□ -1.31
CSDE1-203ENST00000358528 INPP5DQ92835 1189 aa6.87□□□□□ -1.31
CSDE1-203ENST00000358528 UTP4Q969X6 686 aaKnown RBP6.87□□□□□ -1.31
CSDE1-203ENST00000358528 ATG4CQ96DT6 458 aa6.87□□□□□ -1.31
CSDE1-203ENST00000358528 PRR11Q96HE9 360 aaPredicted RBP6.87□□□□□ -1.31
CSDE1-203ENST00000358528 IDI2Q9BXS1 227 aa6.87□□□□□ -1.31
CSDE1-203ENST00000358528 CADM1Q9BY67 442 aaKnown RBP6.87□□□□□ -1.31
CSDE1-203ENST00000358528 RPAP3Q9H6T3 665 aaPredicted RBP6.87□□□□□ -1.31
CSDE1-203ENST00000358528 PIDD1Q9HB75 910 aa6.87□□□□□ -1.31
CSDE1-203ENST00000358528 JPH1Q9HDC5 661 aaPredicted RBP6.87□□□□□ -1.31
CSDE1-203ENST00000358528 AVENQ9NQS1 362 aaPredicted RBP6.87□□□□□ -1.31
CSDE1-203ENST00000358528 SMYD2Q9NRG4 433 aa6.87□□□□□ -1.31
CSDE1-203ENST00000358528 MTO1Q9Y2Z2 717 aaKnown RBP6.87□□□□□ -1.31
CSDE1-203ENST00000358528 TTLL3Q9Y4R7 772 aa6.87□□□□□ -1.31
CSDE1-203ENST00000358528 NOP56O00567 594 aaKnown RBP6.87□□□□□ -1.31
CSDE1-203ENST00000358528 PDE5AO76074 875 aa6.87□□□□□ -1.31
CSDE1-203ENST00000358528 PSMG1O95456 288 aa6.87□□□□□ -1.31
CSDE1-203ENST00000358528 ETS2P15036 469 aa6.87□□□□□ -1.31
CSDE1-203ENST00000358528 RFC1P35251 1148 aaPredicted RBP6.87□□□□□ -1.31
CSDE1-203ENST00000358528 RPL22P35268 128 aaKnown RBP6.87□□□□□ -1.31
CSDE1-203ENST00000358528 CAP2P40123 477 aa6.87□□□□□ -1.31
CSDE1-203ENST00000358528 GDF10P55107 478 aa6.87□□□□□ -1.31
CSDE1-203ENST00000358528 AP2B1P63010 937 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms