RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 NUCKS1Q9H1E3 243 aaKnown RBP16.19■□□□□ 0.18
TPM1-206ENST00000358278 TMLHEQ9NVH6 421 aa16.19■□□□□ 0.18
TPM1-206ENST00000358278 AFF4Q9UHB7 1163 aaKnown RBP16.19■□□□□ 0.18
TPM1-206ENST00000358278 KIAA1257Q9ULG3 409 aa16.19■□□□□ 0.18
TPM1-206ENST00000358278 PCDHB5Q9Y5E4 795 aa16.19■□□□□ 0.18
TPM1-206ENST00000358278 MTCH2Q9Y6C9 303 aa16.19■□□□□ 0.18
TPM1-206ENST00000358278 GOLGA6L6A8MZA4 724 aa16.19■□□□□ 0.18
TPM1-206ENST00000358278 TGM5O43548 720 aa16.19■□□□□ 0.18
TPM1-206ENST00000358278 CLASP2O75122 1294 aaKnown RBP16.19■□□□□ 0.18
TPM1-206ENST00000358278 CALCAP01258 141 aa16.19■□□□□ 0.18
TPM1-206ENST00000358278 CCDC172P0C7W6 258 aa16.19■□□□□ 0.18
TPM1-206ENST00000358278 ATF2P15336 505 aa16.19■□□□□ 0.18
TPM1-206ENST00000358278 FERP16591 822 aa16.19■□□□□ 0.18
TPM1-206ENST00000358278 ADORA2BP29275 332 aa16.19■□□□□ 0.18
TPM1-206ENST00000358278 ELF1P32519 619 aa16.19■□□□□ 0.18
TPM1-206ENST00000358278 KRT9P35527 623 aa16.19■□□□□ 0.18
TPM1-206ENST00000358278 CLCN4P51793 760 aa16.19■□□□□ 0.18
TPM1-206ENST00000358278 PPP1R26Q5T8A7 1209 aaPredicted RBP16.19■□□□□ 0.18
TPM1-206ENST00000358278 MICALL1Q8N3F8 863 aa16.19■□□□□ 0.18
TPM1-206ENST00000358278 SPC24Q8NBT2 197 aa16.19■□□□□ 0.18
TPM1-206ENST00000358278 SPPL2BQ8TCT7 592 aa16.19■□□□□ 0.18
TPM1-206ENST00000358278 SLC2A14Q8TDB8 520 aa16.19■□□□□ 0.18
TPM1-206ENST00000358278 ACP6Q9NPH0 428 aa16.19■□□□□ 0.18
TPM1-206ENST00000358278 CLDN5O00501 218 aa16.18■□□□□ 0.18
TPM1-206ENST00000358278 PRRG1O14668 218 aa16.18■□□□□ 0.18
TPM1-206ENST00000358278 MED7O43513 233 aa16.18■□□□□ 0.18
TPM1-206ENST00000358278 ABLIM3O94929 683 aa16.18■□□□□ 0.18
TPM1-206ENST00000358278 SPATA31D3P0C874 917 aa16.18■□□□□ 0.18
TPM1-206ENST00000358278 TBX2Q13207 712 aaPredicted RBP16.18■□□□□ 0.18
TPM1-206ENST00000358278 ASIC2Q16515 512 aa16.18■□□□□ 0.18
TPM1-206ENST00000358278 DUSP6Q16828 381 aa16.18■□□□□ 0.18
TPM1-206ENST00000358278 TCEAL5Q5H9L2 206 aa16.18■□□□□ 0.18
TPM1-206ENST00000358278 SPATA31D4Q6ZUB0 917 aa16.18■□□□□ 0.18
TPM1-206ENST00000358278 CNGA4Q8IV77 575 aa16.18■□□□□ 0.18
TPM1-206ENST00000358278 ATAD1Q8NBU5 361 aa16.18■□□□□ 0.18
TPM1-206ENST00000358278 MYLIPQ8WY64 445 aa16.18■□□□□ 0.18
TPM1-206ENST00000358278 FUBP3Q96I24 572 aaKnown RBP eCLIP16.18■□□□□ 0.18
TPM1-206ENST00000358278 CDCA3Q99618 268 aaPredicted RBP16.18■□□□□ 0.18
TPM1-206ENST00000358278 B3GNT5Q9BYG0 378 aa16.18■□□□□ 0.18
TPM1-206ENST00000358278 IGFLR1Q9H665 355 aa16.18■□□□□ 0.18
TPM1-206ENST00000358278 CYP4F11Q9HBI6 524 aa16.18■□□□□ 0.18
TPM1-206ENST00000358278 DOCK6Q96HP0 2047 aa16.18■□□□□ 0.18
TPM1-206ENST00000358278 XIRP2A4UGR9 3374 aa16.18■□□□□ 0.18
TPM1-206ENST00000358278 SPDYE4A6NLX3 237 aa16.17■□□□□ 0.18
TPM1-206ENST00000358278 MFAP3LO75121 409 aa16.17■□□□□ 0.18
TPM1-206ENST00000358278 CYP11B1P15538 503 aa16.17■□□□□ 0.18
TPM1-206ENST00000358278 POU3F3P20264 500 aaPredicted RBP16.17■□□□□ 0.18
TPM1-206ENST00000358278 BDNFP23560 247 aa16.17■□□□□ 0.18
TPM1-206ENST00000358278 HOXD11P31277 338 aaPredicted RBP16.17■□□□□ 0.18
TPM1-206ENST00000358278 DUSP4Q13115 394 aa16.17■□□□□ 0.18
TPM1-206ENST00000358278 STILQ15468 1287 aa16.17■□□□□ 0.18
TPM1-206ENST00000358278 TSR1Q2NL82 804 aaKnown RBP16.17■□□□□ 0.18
TPM1-206ENST00000358278 CFAP221Q4G0U5 840 aa16.17■□□□□ 0.18
TPM1-206ENST00000358278 LIN9Q5TKA1 542 aa16.17■□□□□ 0.18
TPM1-206ENST00000358278 LLGL2Q6P1M3 1020 aa16.17■□□□□ 0.18
TPM1-206ENST00000358278 ELMSAN1Q6PJG2 1045 aa16.17■□□□□ 0.18
TPM1-206ENST00000358278 FAM35AQ86V20 835 aa16.17■□□□□ 0.18
TPM1-206ENST00000358278 FUKQ8N0W3 1084 aa16.17■□□□□ 0.18
TPM1-206ENST00000358278 TFAP2BQ92481 460 aa16.17■□□□□ 0.18
TPM1-206ENST00000358278 SMARCD1Q96GM5 515 aa16.17■□□□□ 0.18
TPM1-206ENST00000358278 CDX2Q99626 313 aaPredicted RBP16.17■□□□□ 0.18
TPM1-206ENST00000358278 SEPT5Q99719 369 aaPredicted RBP16.17■□□□□ 0.18
TPM1-206ENST00000358278 RHOBTB2Q9BYZ6 727 aa16.17■□□□□ 0.18
TPM1-206ENST00000358278 ZNF518BQ9C0D4 1074 aa16.17■□□□□ 0.18
TPM1-206ENST00000358278 ABCB6Q9NP58 842 aa16.17■□□□□ 0.18
TPM1-206ENST00000358278 KRT82Q9NSB4 513 aa16.17■□□□□ 0.18
TPM1-206ENST00000358278 HESX1Q9UBX0 185 aa16.17■□□□□ 0.18
TPM1-206ENST00000358278 FBXW11Q9UKB1 542 aa16.17■□□□□ 0.18
TPM1-206ENST00000358278 HCFC2Q9Y5Z7 792 aa16.17■□□□□ 0.18
TPM1-206ENST00000358278 C2orf16Q68DN1 1984 aa16.17■□□□□ 0.18
TPM1-206ENST00000358278 AKR1B15C9JRZ8 316 aaPredicted RBP16.16■□□□□ 0.18
TPM1-206ENST00000358278 O00370 1275 aa16.16■□□□□ 0.18
TPM1-206ENST00000358278 EPCAMP16422 314 aa16.16■□□□□ 0.18
TPM1-206ENST00000358278 ADKP55263 362 aaKnown RBP16.16■□□□□ 0.18
TPM1-206ENST00000358278 GOLGA7BQ2TAP0 167 aa16.16■□□□□ 0.18
TPM1-206ENST00000358278 MGAT5BQ3V5L5 792 aa16.16■□□□□ 0.18
TPM1-206ENST00000358278 ARHGAP17Q68EM7 881 aa16.16■□□□□ 0.18
TPM1-206ENST00000358278 KREMEN2Q8NCW0 462 aa16.16■□□□□ 0.18
TPM1-206ENST00000358278 EPS8L1Q8TE68 723 aa16.16■□□□□ 0.18
TPM1-206ENST00000358278 ZNF606Q8WXB4 792 aa16.16■□□□□ 0.18
TPM1-206ENST00000358278 HNRNPABQ99729 332 aaKnown RBP16.16■□□□□ 0.18
TPM1-206ENST00000358278 MAN1C1Q9NR34 630 aa16.16■□□□□ 0.18
TPM1-206ENST00000358278 AIPL1Q9NZN9 384 aa16.16■□□□□ 0.18
TPM1-206ENST00000358278 DPP7Q9UHL4 492 aa16.16■□□□□ 0.18
TPM1-206ENST00000358278 TSPAN16Q9UKR8 245 aa16.16■□□□□ 0.18
TPM1-206ENST00000358278 MAFFQ9ULX9 164 aa16.16■□□□□ 0.18
TPM1-206ENST00000358278 C5orf42Q9H799 3197 aa16.16■□□□□ 0.18
TPM1-206ENST00000358278 M0QYV0 167 aa16.16■□□□□ 0.18
TPM1-206ENST00000358278 AP1G2O75843 785 aa16.16■□□□□ 0.18
TPM1-206ENST00000358278 VNN2O95498 520 aa16.16■□□□□ 0.18
TPM1-206ENST00000358278 C1RP00736 705 aa16.16■□□□□ 0.18
TPM1-206ENST00000358278 FAM200BP0CF97 657 aa16.16■□□□□ 0.18
TPM1-206ENST00000358278 FOSL2P15408 326 aa16.16■□□□□ 0.18
TPM1-206ENST00000358278 CYP2F1P24903 491 aa16.16■□□□□ 0.18
TPM1-206ENST00000358278 SSTR3P32745 418 aaPredicted RBP16.16■□□□□ 0.18
TPM1-206ENST00000358278 GTF2F1P35269 517 aaKnown RBP eCLIP16.16■□□□□ 0.18
TPM1-206ENST00000358278 SLC8A3P57103 927 aa16.16■□□□□ 0.18
TPM1-206ENST00000358278 GOLGA8FQ08AF8 430 aa16.16■□□□□ 0.18
TPM1-206ENST00000358278 GOLGA8DPQ0D2H9 430 aa16.16■□□□□ 0.18
TPM1-206ENST00000358278 HYAL1Q12794 435 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms