RNA–Protein interactions for RNA: ENST00000358170.6

CD46-205, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,371 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-205ENST00000358170 PIH1D1Q9NWS0 290 aaKnown RBP8.69□□□□□ -1.02
CD46-205ENST00000358170 COX16Q9P0S2 106 aa8.69□□□□□ -1.02
CD46-205ENST00000358170 CYTH4Q9UIA0 394 aa8.69□□□□□ -1.02
CD46-205ENST00000358170 PHTF1Q9UMS5 762 aa8.69□□□□□ -1.02
CD46-205ENST00000358170 NR2E3Q9Y5X4 410 aa8.69□□□□□ -1.02
CD46-205ENST00000358170 ATAD5Q96QE3 1844 aa8.69□□□□□ -1.02
CD46-205ENST00000358170 MYH9P35579 1960 aaKnown RBP8.69□□□□□ -1.02
CD46-205ENST00000358170 SRRM3A6NNA2 597 aaPredicted RBP8.69□□□□□ -1.02
CD46-205ENST00000358170 C19orf81C9J6K1 198 aa8.69□□□□□ -1.02
CD46-205ENST00000358170 ADM5C9JUS6 153 aa8.69□□□□□ -1.02
CD46-205ENST00000358170 IRF6O14896 467 aa8.69□□□□□ -1.02
CD46-205ENST00000358170 OGTO15294 1046 aa8.69□□□□□ -1.02
CD46-205ENST00000358170 CBX6O95503 412 aa8.69□□□□□ -1.02
CD46-205ENST00000358170 ADRA1DP25100 572 aa8.69□□□□□ -1.02
CD46-205ENST00000358170 KLRC2P26717 231 aa8.69□□□□□ -1.02
CD46-205ENST00000358170 VCPP55072 806 aaKnown RBP8.69□□□□□ -1.02
CD46-205ENST00000358170 EIF3EP60228 445 aaKnown RBP8.69□□□□□ -1.02
CD46-205ENST00000358170 NCALDP61601 193 aa8.69□□□□□ -1.02
CD46-205ENST00000358170 ITIH4Q14624 930 aa8.69□□□□□ -1.02
CD46-205ENST00000358170 HADHQ16836 314 aaKnown RBP8.69□□□□□ -1.02
CD46-205ENST00000358170 RFX8Q6ZV50 586 aa8.69□□□□□ -1.02
CD46-205ENST00000358170 SYDE1Q6ZW31 735 aaPredicted RBP8.69□□□□□ -1.02
CD46-205ENST00000358170 ECHDC2Q86YB7 292 aa8.69□□□□□ -1.02
CD46-205ENST00000358170 TEX2Q8IWB9 1127 aa8.69□□□□□ -1.02
CD46-205ENST00000358170 ZCCHC9Q8N567 271 aaKnown RBP8.69□□□□□ -1.02
CD46-205ENST00000358170 FBXO36Q8NEA4 188 aa8.69□□□□□ -1.02
CD46-205ENST00000358170 SPATA18Q8TC71 538 aa8.69□□□□□ -1.02
CD46-205ENST00000358170 FBF1Q8TES7 1133 aa8.69□□□□□ -1.02
CD46-205ENST00000358170 TTC17Q96AE7 1141 aa8.69□□□□□ -1.02
CD46-205ENST00000358170 GGA2Q9UJY4 613 aa8.69□□□□□ -1.02
CD46-205ENST00000358170 CSADQ9Y600 493 aa8.69□□□□□ -1.02
CD46-205ENST00000358170 hCG_1818297A0A087WSY0 165 aa8.68□□□□□ -1.02
CD46-205ENST00000358170 C2orf71A6NGG8 1288 aa8.68□□□□□ -1.02
CD46-205ENST00000358170 MSCO60682 206 aa8.68□□□□□ -1.02
CD46-205ENST00000358170 TXNP10599 105 aaKnown RBP8.68□□□□□ -1.02
CD46-205ENST00000358170 COPS2P61201 443 aa8.68□□□□□ -1.02
CD46-205ENST00000358170 LMNB2Q03252 620 aa8.68□□□□□ -1.02
CD46-205ENST00000358170 ZBTB16Q05516 673 aa8.68□□□□□ -1.02
CD46-205ENST00000358170 SPARCL1Q14515 664 aa8.68□□□□□ -1.02
CD46-205ENST00000358170 EAPPQ56P03 285 aaPredicted RBP8.68□□□□□ -1.02
CD46-205ENST00000358170 PPP1R21Q6ZMI0 780 aa8.68□□□□□ -1.02
CD46-205ENST00000358170 ALLCQ8N6M5 410 aa8.68□□□□□ -1.02
CD46-205ENST00000358170 ACO2Q99798 780 aaKnown RBP8.68□□□□□ -1.02
CD46-205ENST00000358170 LPIN3Q9BQK8 851 aa8.68□□□□□ -1.02
CD46-205ENST00000358170 ADPGKQ9BRR6 497 aa8.68□□□□□ -1.02
CD46-205ENST00000358170 TRIM56Q9BRZ2 755 aaKnown RBP8.68□□□□□ -1.02
CD46-205ENST00000358170 TMEM109Q9BVC6 243 aa8.68□□□□□ -1.02
CD46-205ENST00000358170 XPO7Q9UIA9 1087 aaKnown RBP8.68□□□□□ -1.02
CD46-205ENST00000358170 MAGED2Q9UNF1 606 aaPredicted RBP8.68□□□□□ -1.02
CD46-205ENST00000358170 LRCH4O75427 683 aa8.68□□□□□ -1.02
CD46-205ENST00000358170 NQO1P15559 274 aaKnown RBP8.68□□□□□ -1.02
CD46-205ENST00000358170 MIPP30301 263 aa8.68□□□□□ -1.02
CD46-205ENST00000358170 RPL22P35268 128 aaKnown RBP8.68□□□□□ -1.02
CD46-205ENST00000358170 CDKN2BP42772 138 aa8.68□□□□□ -1.02
CD46-205ENST00000358170 MSH2P43246 934 aa8.68□□□□□ -1.02
CD46-205ENST00000358170 SESN3P58005 492 aa8.68□□□□□ -1.02
CD46-205ENST00000358170 ZNF280AP59817 542 aaPredicted RBP8.68□□□□□ -1.02
CD46-205ENST00000358170 MGAT5Q09328 741 aa8.68□□□□□ -1.02
CD46-205ENST00000358170 XRCC4Q13426 336 aa8.68□□□□□ -1.02
CD46-205ENST00000358170 NEDD9Q14511 834 aa8.68□□□□□ -1.02
CD46-205ENST00000358170 LACTB2Q53H82 288 aaPredicted RBP8.68□□□□□ -1.02
CD46-205ENST00000358170 SESTD1Q86VW0 696 aa8.68□□□□□ -1.02
CD46-205ENST00000358170 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.68□□□□□ -1.02
CD46-205ENST00000358170 AGAP11Q8TF27 550 aa8.68□□□□□ -1.02
CD46-205ENST00000358170 SPATC1LQ9H0A9 340 aa8.68□□□□□ -1.02
CD46-205ENST00000358170 UBN1Q9NPG3 1134 aa8.68□□□□□ -1.02
CD46-205ENST00000358170 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.68□□□□□ -1.02
CD46-205ENST00000358170 MAD1L1Q9Y6D9 718 aa8.68□□□□□ -1.02
CD46-205ENST00000358170 A0A087WZ62 844 aa8.67□□□□□ -1.02
CD46-205ENST00000358170 DIAPH2O60879 1101 aa8.67□□□□□ -1.02
CD46-205ENST00000358170 FAM155BO75949 473 aa8.67□□□□□ -1.02
CD46-205ENST00000358170 DDNO94850 711 aaPredicted RBP8.67□□□□□ -1.02
CD46-205ENST00000358170 POLR2BP30876 1174 aaKnown RBP8.67□□□□□ -1.02
CD46-205ENST00000358170 CLNS1AP54105 237 aaKnown RBP8.67□□□□□ -1.02
CD46-205ENST00000358170 RTP1P59025 263 aa8.67□□□□□ -1.02
CD46-205ENST00000358170 PIGHQ14442 188 aaPredicted RBP8.67□□□□□ -1.02
CD46-205ENST00000358170 KRT81Q14533 505 aa8.67□□□□□ -1.02
CD46-205ENST00000358170 PLCB4Q15147 1175 aa8.67□□□□□ -1.02
CD46-205ENST00000358170 GLRA4Q5JXX5 417 aa8.67□□□□□ -1.02
CD46-205ENST00000358170 TRABD2AQ86V40 505 aa8.67□□□□□ -1.02
CD46-205ENST00000358170 WDR49Q8IV35 697 aa8.67□□□□□ -1.02
CD46-205ENST00000358170 SULF1Q8IWU6 871 aa8.67□□□□□ -1.02
CD46-205ENST00000358170 PIWIL1Q96J94 861 aaKnown RBP8.67□□□□□ -1.02
CD46-205ENST00000358170 LRRC37BQ96QE4 947 aa8.67□□□□□ -1.02
CD46-205ENST00000358170 FDXACB1Q9BRP7 624 aaPredicted RBP8.67□□□□□ -1.02
CD46-205ENST00000358170 SLC13A1Q9BZW2 595 aa8.67□□□□□ -1.02
CD46-205ENST00000358170 MYLK2Q9H1R3 596 aa8.67□□□□□ -1.02
CD46-205ENST00000358170 RNPEPQ9H4A4 650 aa8.67□□□□□ -1.02
CD46-205ENST00000358170 ZNF408Q9H9D4 720 aa8.67□□□□□ -1.02
CD46-205ENST00000358170 GRID1Q9ULK0 1009 aa8.67□□□□□ -1.02
CD46-205ENST00000358170 NFASCO94856 1347 aa8.67□□□□□ -1.02
CD46-205ENST00000358170 COL2A1P02458 1487 aaPredicted RBP8.67□□□□□ -1.02
CD46-205ENST00000358170 CCDC195A0A1B0GUA6 201 aa8.67□□□□□ -1.02
CD46-205ENST00000358170 LACTBL1A8MY62 500 aa8.67□□□□□ -1.02
CD46-205ENST00000358170 GPR25O00155 361 aa8.67□□□□□ -1.02
CD46-205ENST00000358170 ITGBL1O95965 494 aaPredicted RBP8.67□□□□□ -1.02
CD46-205ENST00000358170 ERBB2P04626 1255 aa8.67□□□□□ -1.02
CD46-205ENST00000358170 PDGFRAP16234 1089 aa8.67□□□□□ -1.02
CD46-205ENST00000358170 Q3C1V9 767 aa8.67□□□□□ -1.02
CD46-205ENST00000358170 TRIM68Q6AZZ1 485 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms