RNA–Protein interactions for RNA: ENST00000357896.7

IFT20-202, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best) BASIC

Gene IFT20, Length 974 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-202ENST00000357896 CDC25AP30304 524 aa17.1■□□□□ 0.33
IFT20-202ENST00000357896 SEMA3BQ13214 749 aa17.1■□□□□ 0.33
IFT20-202ENST00000357896 BYSLQ13895 437 aaKnown RBP17.1■□□□□ 0.33
IFT20-202ENST00000357896 TMEM132DQ14C87 1099 aa17.1■□□□□ 0.33
IFT20-202ENST00000357896 ZNF77Q15935 545 aa17.1■□□□□ 0.33
IFT20-202ENST00000357896 CRY1Q16526 586 aa17.1■□□□□ 0.33
IFT20-202ENST00000357896 SLC23A3Q6PIS1 610 aa17.1■□□□□ 0.33
IFT20-202ENST00000357896 PIP4P1Q86T03 277 aa17.1■□□□□ 0.33
IFT20-202ENST00000357896 PROSER1Q86XN7 944 aa17.1■□□□□ 0.33
IFT20-202ENST00000357896 ABCA7Q8IZY2 2146 aa17.1■□□□□ 0.33
IFT20-202ENST00000357896 HDDC3Q8N4P3 179 aa17.1■□□□□ 0.33
IFT20-202ENST00000357896 TTC16Q8NEE8 873 aa17.1■□□□□ 0.33
IFT20-202ENST00000357896 MDGA1Q8NFP4 955 aa17.1■□□□□ 0.33
IFT20-202ENST00000357896 OLIG1Q8TAK6 271 aa17.1■□□□□ 0.33
IFT20-202ENST00000357896 KCNN1Q92952 543 aa17.1■□□□□ 0.33
IFT20-202ENST00000357896 PYM1Q9BRP8 204 aaKnown RBP17.1■□□□□ 0.33
IFT20-202ENST00000357896 TRPC7Q9HCX4 862 aa17.1■□□□□ 0.33
IFT20-202ENST00000357896 MMP17Q9ULZ9 603 aa17.1■□□□□ 0.33
IFT20-202ENST00000357896 WNT6Q9Y6F9 365 aa17.1■□□□□ 0.33
IFT20-202ENST00000357896 LAMA5O15230 3695 aa17.1■□□□□ 0.33
IFT20-202ENST00000357896 SPAARA0A1B0GVQ0 90 aa17.09■□□□□ 0.33
IFT20-202ENST00000357896 K7EQS6 105 aa17.09■□□□□ 0.33
IFT20-202ENST00000357896 LAD1O00515 517 aa17.09■□□□□ 0.33
IFT20-202ENST00000357896 PRPF40AO75400 957 aaKnown RBP17.09■□□□□ 0.33
IFT20-202ENST00000357896 NFATC1O95644 943 aa17.09■□□□□ 0.33
IFT20-202ENST00000357896 HOXD12P35452 270 aa17.09■□□□□ 0.33
IFT20-202ENST00000357896 TAF6P49848 677 aa17.09■□□□□ 0.33
IFT20-202ENST00000357896 ATXN3P54252 364 aaPredicted RBP17.09■□□□□ 0.33
IFT20-202ENST00000357896 NCKAP1LP55160 1127 aa17.09■□□□□ 0.33
IFT20-202ENST00000357896 RPL10AP62906 217 aaKnown RBP17.09■□□□□ 0.33
IFT20-202ENST00000357896 MRPS21P82921 87 aaKnown RBP17.09■□□□□ 0.33
IFT20-202ENST00000357896 TSPY1Q01534 308 aa17.09■□□□□ 0.33
IFT20-202ENST00000357896 WSCD1Q658N2 575 aa17.09■□□□□ 0.33
IFT20-202ENST00000357896 EFCAB13Q8IY85 973 aa17.09■□□□□ 0.33
IFT20-202ENST00000357896 SYT2Q8N9I0 419 aaPredicted RBP17.09■□□□□ 0.33
IFT20-202ENST00000357896 FSIP1Q8NA03 581 aa17.09■□□□□ 0.33
IFT20-202ENST00000357896 WHAMMQ8TF30 809 aa17.09■□□□□ 0.33
IFT20-202ENST00000357896 TRMT2BQ96GJ1 504 aaKnown RBP17.09■□□□□ 0.33
IFT20-202ENST00000357896 MYRFLQ96LU7 910 aa17.09■□□□□ 0.33
IFT20-202ENST00000357896 MSTO1Q9BUK6 570 aa17.09■□□□□ 0.33
IFT20-202ENST00000357896 CCSER1Q9C0I3 900 aa17.09■□□□□ 0.33
IFT20-202ENST00000357896 ASB7Q9H672 318 aa17.09■□□□□ 0.33
IFT20-202ENST00000357896 CPSF3Q9UKF6 684 aaKnown RBP17.09■□□□□ 0.33
IFT20-202ENST00000357896 C2CD2Q9Y426 696 aa17.09■□□□□ 0.33
IFT20-202ENST00000357896 THADAQ6YHU6 1953 aa17.09■□□□□ 0.33
IFT20-202ENST00000357896 A0A0B4J269 797 aa17.08■□□□□ 0.32
IFT20-202ENST00000357896 PP2D1A8MPX8 630 aa17.08■□□□□ 0.32
IFT20-202ENST00000357896 NFICP08651 508 aa17.08■□□□□ 0.32
IFT20-202ENST00000357896 P2RY2P41231 377 aa17.08■□□□□ 0.32
IFT20-202ENST00000357896 SEC13P55735 322 aa17.08■□□□□ 0.32
IFT20-202ENST00000357896 HNRNPDQ14103 355 aaKnown RBP17.08■□□□□ 0.32
IFT20-202ENST00000357896 ZNF423Q2M1K9 1284 aa17.08■□□□□ 0.32
IFT20-202ENST00000357896 DTHD1Q6ZMT9 781 aa17.08■□□□□ 0.32
IFT20-202ENST00000357896 KCNK18Q7Z418 384 aa17.08■□□□□ 0.32
IFT20-202ENST00000357896 TTC30AQ86WT1 665 aa17.08■□□□□ 0.32
IFT20-202ENST00000357896 CEP76Q8TAP6 659 aa17.08■□□□□ 0.32
IFT20-202ENST00000357896 CYP2S1Q96SQ9 504 aa17.08■□□□□ 0.32
IFT20-202ENST00000357896 ABCB6Q9NP58 842 aa17.08■□□□□ 0.32
IFT20-202ENST00000357896 CIZ1Q9ULV3 898 aaPredicted RBP17.08■□□□□ 0.32
IFT20-202ENST00000357896 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.07■□□□□ 0.32
IFT20-202ENST00000357896 NOL4O94818 638 aa17.07■□□□□ 0.32
IFT20-202ENST00000357896 PIGRP01833 764 aa17.07■□□□□ 0.32
IFT20-202ENST00000357896 PRPHP41219 470 aa17.07■□□□□ 0.32
IFT20-202ENST00000357896 PTGER3P43115 390 aa17.07■□□□□ 0.32
IFT20-202ENST00000357896 PDE6CP51160 858 aa17.07■□□□□ 0.32
IFT20-202ENST00000357896 GFPT1Q06210 699 aaPredicted RBP17.07■□□□□ 0.32
IFT20-202ENST00000357896 USP4Q13107 963 aa17.07■□□□□ 0.32
IFT20-202ENST00000357896 ZRSR1Q15695 479 aaKnown RBP17.07■□□□□ 0.32
IFT20-202ENST00000357896 HSF5Q4G112 596 aaPredicted RBP17.07■□□□□ 0.32
IFT20-202ENST00000357896 LYSMD4Q5XG99 296 aa17.07■□□□□ 0.32
IFT20-202ENST00000357896 TMEFF1Q8IYR6 380 aa17.07■□□□□ 0.32
IFT20-202ENST00000357896 CCDC33Q8N5R6 958 aa17.07■□□□□ 0.32
IFT20-202ENST00000357896 FBXO18Q8NFZ0 1043 aa17.07■□□□□ 0.32
IFT20-202ENST00000357896 SH3RF2Q8TEC5 729 aa17.07■□□□□ 0.32
IFT20-202ENST00000357896 FNBP1Q96RU3 617 aa17.07■□□□□ 0.32
IFT20-202ENST00000357896 PI4K2AQ9BTU6 479 aa17.07■□□□□ 0.32
IFT20-202ENST00000357896 POLMQ9NP87 494 aaPredicted RBP17.07■□□□□ 0.32
IFT20-202ENST00000357896 TMEM74BQ9NUR3 256 aa17.07■□□□□ 0.32
IFT20-202ENST00000357896 DPP3Q9NY33 737 aa17.07■□□□□ 0.32
IFT20-202ENST00000357896 GPSM3Q9Y4H4 160 aa17.07■□□□□ 0.32
IFT20-202ENST00000357896 ASCC3Q8N3C0 2202 aaKnown RBP17.06■□□□□ 0.32
IFT20-202ENST00000357896 ZNF638Q14966 1978 aaKnown RBP17.06■□□□□ 0.32
IFT20-202ENST00000357896 KPNA7A9QM74 516 aa17.06■□□□□ 0.32
IFT20-202ENST00000357896 CAPNS1P04632 268 aa17.06■□□□□ 0.32
IFT20-202ENST00000357896 TCF3P15923 654 aa17.06■□□□□ 0.32
IFT20-202ENST00000357896 NBR1Q14596 966 aa17.06■□□□□ 0.32
IFT20-202ENST00000357896 KCNB1Q14721 858 aa17.06■□□□□ 0.32
IFT20-202ENST00000357896 SV2CQ496J9 727 aa17.06■□□□□ 0.32
IFT20-202ENST00000357896 ARMCX6Q7L4S7 300 aa17.06■□□□□ 0.32
IFT20-202ENST00000357896 CHCHD4Q8N4Q1 142 aa17.06■□□□□ 0.32
IFT20-202ENST00000357896 LEO1Q8WVC0 666 aaPredicted RBP17.06■□□□□ 0.32
IFT20-202ENST00000357896 RLN3Q8WXF3 142 aa17.06■□□□□ 0.32
IFT20-202ENST00000357896 SLC22A12Q96S37 553 aa17.06■□□□□ 0.32
IFT20-202ENST00000357896 MMTAG2Q9BU76 263 aaKnown RBP17.06■□□□□ 0.32
IFT20-202ENST00000357896 LINC00597Q9H2U6 94 aa17.06■□□□□ 0.32
IFT20-202ENST00000357896 BCCIPQ9P287 314 aaKnown RBP eCLIP17.06■□□□□ 0.32
IFT20-202ENST00000357896 PILRBQ9UKJ0 227 aa17.06■□□□□ 0.32
IFT20-202ENST00000357896 SLC6A14Q9UN76 642 aa17.06■□□□□ 0.32
IFT20-202ENST00000357896 GCN1Q92616 2671 aaKnown RBP17.06■□□□□ 0.32
IFT20-202ENST00000357896 DENND4CQ5VZ89 1909 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms