RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 MMEP08473 750 aa26.95■■□□□ 1.91
SSBP3-202ENST00000357475 PRKCIP41743 596 aa26.95■■□□□ 1.91
SSBP3-202ENST00000357475 PDE6CP51160 858 aa26.95■■□□□ 1.91
SSBP3-202ENST00000357475 GPR17Q13304 367 aa26.95■■□□□ 1.91
SSBP3-202ENST00000357475 MEA1Q16626 185 aa26.95■■□□□ 1.91
SSBP3-202ENST00000357475 ZNF571Q7Z3V5 609 aaPredicted RBP26.95■■□□□ 1.91
SSBP3-202ENST00000357475 ATAD1Q8NBU5 361 aa26.95■■□□□ 1.91
SSBP3-202ENST00000357475 FAM161BQ96MY7 647 aa26.95■■□□□ 1.91
SSBP3-202ENST00000357475 SYT11Q9BT88 431 aa26.95■■□□□ 1.91
SSBP3-202ENST00000357475 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP26.95■■□□□ 1.91
SSBP3-202ENST00000357475 TMEM30AQ9NV96 361 aa26.95■■□□□ 1.91
SSBP3-202ENST00000357475 SSX2IPQ9Y2D8 614 aa26.95■■□□□ 1.91
SSBP3-202ENST00000357475 PER2O15055 1255 aa26.95■■□□□ 1.9
SSBP3-202ENST00000357475 NDUFV1P49821 464 aa26.95■■□□□ 1.9
SSBP3-202ENST00000357475 KLHL30Q0D2K2 578 aa26.95■■□□□ 1.9
SSBP3-202ENST00000357475 GOLGA7BQ2TAP0 167 aa26.95■■□□□ 1.9
SSBP3-202ENST00000357475 PASD1Q8IV76 773 aa26.95■■□□□ 1.9
SSBP3-202ENST00000357475 DCP1BQ8IZD4 617 aaKnown RBP26.95■■□□□ 1.9
SSBP3-202ENST00000357475 OXCT2Q9BYC2 517 aaPredicted RBP26.95■■□□□ 1.9
SSBP3-202ENST00000357475 LMAN2LQ9H0V9 348 aa26.95■■□□□ 1.9
SSBP3-202ENST00000357475 ABI2Q9NYB9 513 aaPredicted RBP26.95■■□□□ 1.9
SSBP3-202ENST00000357475 TSPAN16Q9UKR8 245 aa26.95■■□□□ 1.9
SSBP3-202ENST00000357475 WDR3Q9UNX4 943 aaKnown RBP eCLIP26.95■■□□□ 1.9
SSBP3-202ENST00000357475 MTMR11A4FU01 709 aa26.94■■□□□ 1.9
SSBP3-202ENST00000357475 MICAL2O94851 1124 aa26.94■■□□□ 1.9
SSBP3-202ENST00000357475 SPATA31D3P0C874 917 aa26.94■■□□□ 1.9
SSBP3-202ENST00000357475 BPIFB4P59827 614 aa26.94■■□□□ 1.9
SSBP3-202ENST00000357475 RAB33AQ14088 237 aa26.94■■□□□ 1.9
SSBP3-202ENST00000357475 ARHGAP17Q68EM7 881 aa26.94■■□□□ 1.9
SSBP3-202ENST00000357475 DENND1BQ6P3S1 775 aa26.94■■□□□ 1.9
SSBP3-202ENST00000357475 SPATA31D4Q6ZUB0 917 aa26.94■■□□□ 1.9
SSBP3-202ENST00000357475 TTC30AQ86WT1 665 aa26.94■■□□□ 1.9
SSBP3-202ENST00000357475 UBA3Q8TBC4 463 aa26.94■■□□□ 1.9
SSBP3-202ENST00000357475 PANX2Q96RD6 677 aa26.94■■□□□ 1.9
SSBP3-202ENST00000357475 MED10Q9BTT4 135 aa26.94■■□□□ 1.9
SSBP3-202ENST00000357475 SERPING1P05155 500 aa26.93■■□□□ 1.9
SSBP3-202ENST00000357475 BDNFP23560 247 aa26.93■■□□□ 1.9
SSBP3-202ENST00000357475 FMO1Q01740 532 aa26.93■■□□□ 1.9
SSBP3-202ENST00000357475 TDRD12Q587J7 1177 aaKnown RBP26.93■■□□□ 1.9
SSBP3-202ENST00000357475 RBM23Q86U06 439 aaKnown RBP26.93■■□□□ 1.9
SSBP3-202ENST00000357475 FAM35AQ86V20 835 aa26.93■■□□□ 1.9
SSBP3-202ENST00000357475 MRPL38Q96DV4 380 aaKnown RBP26.93■■□□□ 1.9
SSBP3-202ENST00000357475 PCDHB18PQ96TA0 734 aa26.93■■□□□ 1.9
SSBP3-202ENST00000357475 HNRNPABQ99729 332 aaKnown RBP26.93■■□□□ 1.9
SSBP3-202ENST00000357475 AGPAT1Q99943 283 aa26.93■■□□□ 1.9
SSBP3-202ENST00000357475 KIAA1257Q9ULG3 409 aa26.93■■□□□ 1.9
SSBP3-202ENST00000357475 SLC27A5Q9Y2P5 690 aa26.93■■□□□ 1.9
SSBP3-202ENST00000357475 BEST1O76090 585 aa26.92■■□□□ 1.9
SSBP3-202ENST00000357475 ABLIM3O94929 683 aa26.92■■□□□ 1.9
SSBP3-202ENST00000357475 CYP2F1P24903 491 aa26.92■■□□□ 1.9
SSBP3-202ENST00000357475 CDR2Q01850 454 aa26.92■■□□□ 1.9
SSBP3-202ENST00000357475 CREMQ03060 361 aa26.92■■□□□ 1.9
SSBP3-202ENST00000357475 ADCY1Q08828 1119 aa26.92■■□□□ 1.9
SSBP3-202ENST00000357475 CNGA2Q16280 664 aa26.92■■□□□ 1.9
SSBP3-202ENST00000357475 SMYD5Q6GMV2 418 aa26.92■■□□□ 1.9
SSBP3-202ENST00000357475 LCLAT1Q6UWP7 414 aa26.92■■□□□ 1.9
SSBP3-202ENST00000357475 SPATA2LQ8IUW3 424 aaPredicted RBP26.92■■□□□ 1.9
SSBP3-202ENST00000357475 TMEM139Q8IV31 216 aa26.92■■□□□ 1.9
SSBP3-202ENST00000357475 PPP1R9BQ96SB3 815 aa26.92■■□□□ 1.9
SSBP3-202ENST00000357475 EMILIN2Q9BXX0 1053 aa26.92■■□□□ 1.9
SSBP3-202ENST00000357475 TMEM265A0A087WTH1 108 aa26.91■■□□□ 1.9
SSBP3-202ENST00000357475 TGM5O43548 720 aa26.91■■□□□ 1.9
SSBP3-202ENST00000357475 SOAT2O75908 522 aa26.91■■□□□ 1.9
SSBP3-202ENST00000357475 SEC24AO95486 1093 aa26.91■■□□□ 1.9
SSBP3-202ENST00000357475 KLRC2P26717 231 aa26.91■■□□□ 1.9
SSBP3-202ENST00000357475 CCDC173Q0VFZ6 552 aa26.91■■□□□ 1.9
SSBP3-202ENST00000357475 BMS1Q14692 1282 aaKnown RBP26.91■■□□□ 1.9
SSBP3-202ENST00000357475 ZNF461Q8TAF7 563 aa26.91■■□□□ 1.9
SSBP3-202ENST00000357475 KRT82Q9NSB4 513 aa26.91■■□□□ 1.9
SSBP3-202ENST00000357475 PCDHB5Q9Y5E4 795 aa26.91■■□□□ 1.9
SSBP3-202ENST00000357475 MTCL1Q9Y4B5 1905 aaKnown RBP26.91■■□□□ 1.9
SSBP3-202ENST00000357475 GOLGA6L6A8MZA4 724 aa26.9■■□□□ 1.9
SSBP3-202ENST00000357475 M0QYV0 167 aa26.9■■□□□ 1.9
SSBP3-202ENST00000357475 TULP2O00295 520 aa26.9■■□□□ 1.9
SSBP3-202ENST00000357475 CLASP2O75122 1294 aaKnown RBP26.9■■□□□ 1.9
SSBP3-202ENST00000357475 ADH1AP07327 375 aa26.9■■□□□ 1.9
SSBP3-202ENST00000357475 CCDC172P0C7W6 258 aa26.9■■□□□ 1.9
SSBP3-202ENST00000357475 FECHP22830 423 aa26.9■■□□□ 1.9
SSBP3-202ENST00000357475 GTF2F1P35269 517 aaKnown RBP eCLIP26.9■■□□□ 1.91e-6■■■■□ 23.4
SSBP3-202ENST00000357475 EIF4A3P38919 411 aaKnown RBP26.9■■□□□ 1.9
SSBP3-202ENST00000357475 GPR15P49685 360 aa26.9■■□□□ 1.9
SSBP3-202ENST00000357475 GSDMDP57764 484 aa26.9■■□□□ 1.9
SSBP3-202ENST00000357475 RBM10P98175 930 aaKnown RBP26.9■■□□□ 1.9
SSBP3-202ENST00000357475 DUSP4Q13115 394 aa26.9■■□□□ 1.9
SSBP3-202ENST00000357475 ADGRE1Q14246 886 aa26.9■■□□□ 1.9
SSBP3-202ENST00000357475 MAPRE1Q15691 268 aaKnown RBP26.9■■□□□ 1.9
SSBP3-202ENST00000357475 NFE2Q16621 373 aaPredicted RBP26.9■■□□□ 1.9
SSBP3-202ENST00000357475 TSR1Q2NL82 804 aaKnown RBP26.9■■□□□ 1.9
SSBP3-202ENST00000357475 PKDCCQ504Y2 493 aa26.9■■□□□ 1.9
SSBP3-202ENST00000357475 ZNF697Q5TEC3 545 aa26.9■■□□□ 1.9
SSBP3-202ENST00000357475 PDE12Q6L8Q7 609 aaKnown RBP26.9■■□□□ 1.9
SSBP3-202ENST00000357475 ZNHIT6Q9NWK9 470 aaKnown RBP26.9■■□□□ 1.9
SSBP3-202ENST00000357475 CLCN4P51793 760 aa26.9■■□□□ 1.9
SSBP3-202ENST00000357475 LILRA6Q6PI73 481 aa26.9■■□□□ 1.9
SSBP3-202ENST00000357475 FMNL3Q8IVF7 1028 aa26.9■■□□□ 1.9
SSBP3-202ENST00000357475 WDTC1Q8N5D0 677 aa26.9■■□□□ 1.9
SSBP3-202ENST00000357475 STKLD1Q8NE28 680 aa26.9■■□□□ 1.9
SSBP3-202ENST00000357475 ZMIZ2Q8NF64 920 aa26.9■■□□□ 1.9
SSBP3-202ENST00000357475 KCNK16Q96T55 309 aa26.9■■□□□ 1.9
SSBP3-202ENST00000357475 SMOQ99835 787 aa26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms