RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 AAASQ9NRG9 546 aa13.39□□□□□ -0.27
RTFDC1-202ENST00000357348 WHRNQ9P202 907 aa13.39□□□□□ -0.27
RTFDC1-202ENST00000357348 ARL2BPQ9Y2Y0 163 aa13.39□□□□□ -0.27
RTFDC1-202ENST00000357348 L3MBTL1Q9Y468 752 aa13.39□□□□□ -0.27
RTFDC1-202ENST00000357348 CDY2AQ9Y6F7 541 aa13.39□□□□□ -0.27
RTFDC1-202ENST00000357348 TRIP11Q15643 1979 aa13.39□□□□□ -0.27
RTFDC1-202ENST00000357348 SMIM23A6NLE4 172 aa13.39□□□□□ -0.27
RTFDC1-202ENST00000357348 PIGRP01833 764 aa13.39□□□□□ -0.27
RTFDC1-202ENST00000357348 CCNB1P14635 433 aa13.39□□□□□ -0.27
RTFDC1-202ENST00000357348 EIF4BP23588 611 aaKnown RBP13.39□□□□□ -0.27
RTFDC1-202ENST00000357348 IFNAR2P48551 515 aa13.39□□□□□ -0.27
RTFDC1-202ENST00000357348 SNRPFP62306 86 aaKnown RBP13.39□□□□□ -0.27
RTFDC1-202ENST00000357348 GPC5P78333 572 aa13.39□□□□□ -0.27
RTFDC1-202ENST00000357348 PPP3CAQ08209 521 aa13.39□□□□□ -0.27
RTFDC1-202ENST00000357348 CCDC15Q0P6D6 951 aa13.39□□□□□ -0.27
RTFDC1-202ENST00000357348 SNX17Q15036 470 aa13.39□□□□□ -0.27
RTFDC1-202ENST00000357348 SEL1L2Q5TEA6 688 aa13.39□□□□□ -0.27
RTFDC1-202ENST00000357348 RNF43Q68DV7 783 aa13.39□□□□□ -0.27
RTFDC1-202ENST00000357348 TAF2Q6P1X5 1199 aa13.39□□□□□ -0.27
RTFDC1-202ENST00000357348 TSHZ1Q6ZSZ6 1077 aa13.39□□□□□ -0.27
RTFDC1-202ENST00000357348 INTS8Q75QN2 995 aaKnown RBP13.39□□□□□ -0.27
RTFDC1-202ENST00000357348 SERINC5Q86VE9 423 aa13.39□□□□□ -0.27
RTFDC1-202ENST00000357348 SLC13A5Q86YT5 568 aaPredicted RBP13.39□□□□□ -0.27
RTFDC1-202ENST00000357348 TMEM174Q8WUU8 243 aa13.39□□□□□ -0.27
RTFDC1-202ENST00000357348 ZNF570Q96NI8 536 aa13.39□□□□□ -0.27
RTFDC1-202ENST00000357348 ANKRD27Q96NW4 1050 aa13.39□□□□□ -0.27
RTFDC1-202ENST00000357348 NFKBIZQ9BYH8 718 aa13.39□□□□□ -0.27
RTFDC1-202ENST00000357348 SENP6Q9GZR1 1112 aaPredicted RBP13.39□□□□□ -0.27
RTFDC1-202ENST00000357348 FOXN3O00409 490 aaPredicted RBP13.38□□□□□ -0.27
RTFDC1-202ENST00000357348 EXTL3O43909 919 aa13.38□□□□□ -0.27
RTFDC1-202ENST00000357348 B4GALT4O60513 344 aa13.38□□□□□ -0.27
RTFDC1-202ENST00000357348 DARSP14868 501 aaKnown RBP13.38□□□□□ -0.27
RTFDC1-202ENST00000357348 ATP5DP30049 168 aa13.38□□□□□ -0.27
RTFDC1-202ENST00000357348 NFX1Q12986 1120 aaKnown RBP13.38□□□□□ -0.27
RTFDC1-202ENST00000357348 GRIK3Q13003 919 aa13.38□□□□□ -0.27
RTFDC1-202ENST00000357348 NAA25Q14CX7 972 aa13.38□□□□□ -0.27
RTFDC1-202ENST00000357348 MPZL3Q6UWV2 235 aa13.38□□□□□ -0.27
RTFDC1-202ENST00000357348 BZW1Q7L1Q6 419 aaKnown RBP13.38□□□□□ -0.27
RTFDC1-202ENST00000357348 ARHGEF2Q92974 986 aaKnown RBP13.38□□□□□ -0.27
RTFDC1-202ENST00000357348 CDT1Q9H211 546 aa13.38□□□□□ -0.27
RTFDC1-202ENST00000357348 CDC42EP4Q9H3Q1 356 aaKnown RBP13.38□□□□□ -0.27
RTFDC1-202ENST00000357348 PDZD7Q9H5P4 517 aa13.38□□□□□ -0.27
RTFDC1-202ENST00000357348 FGFR1OP2Q9NVK5 253 aa13.38□□□□□ -0.27
RTFDC1-202ENST00000357348 RBAKQ9NYW8 714 aaPredicted RBP13.38□□□□□ -0.27
RTFDC1-202ENST00000357348 CTTNBP2NLQ9P2B4 639 aa13.38□□□□□ -0.27
RTFDC1-202ENST00000357348 STYXL1Q9Y6J8 313 aa13.38□□□□□ -0.27
RTFDC1-202ENST00000357348 TMEM120BA0PK00 339 aa13.37□□□□□ -0.27
RTFDC1-202ENST00000357348 TCP11X1B4DZS4 312 aa13.37□□□□□ -0.27
RTFDC1-202ENST00000357348 M0QZ92 97 aa13.37□□□□□ -0.27
RTFDC1-202ENST00000357348 ABLIM1O14639 778 aa13.37□□□□□ -0.27
RTFDC1-202ENST00000357348 PPP1R12AO14974 1030 aaPredicted RBP13.37□□□□□ -0.27
RTFDC1-202ENST00000357348 CABYRO75952 493 aa13.37□□□□□ -0.27
RTFDC1-202ENST00000357348 CHRNA1P02708 482 aa13.37□□□□□ -0.27
RTFDC1-202ENST00000357348 FTLP02792 175 aaPredicted RBP13.37□□□□□ -0.27
RTFDC1-202ENST00000357348 PYGMP11217 842 aa13.37□□□□□ -0.27
RTFDC1-202ENST00000357348 COMTP21964 271 aa13.37□□□□□ -0.27
RTFDC1-202ENST00000357348 SLCO1A2P46721 670 aa13.37□□□□□ -0.27
RTFDC1-202ENST00000357348 MRPS6P82932 125 aaKnown RBP13.37□□□□□ -0.27
RTFDC1-202ENST00000357348 POU5F1BQ06416 359 aa13.37□□□□□ -0.27
RTFDC1-202ENST00000357348 CYP24A1Q07973 514 aa13.37□□□□□ -0.27
RTFDC1-202ENST00000357348 C1orf220Q5T0J3 134 aa13.37□□□□□ -0.27
RTFDC1-202ENST00000357348 FBXO46Q6PJ61 603 aaPredicted RBP13.37□□□□□ -0.27
RTFDC1-202ENST00000357348 SPATA21Q7Z572 469 aa13.37□□□□□ -0.27
RTFDC1-202ENST00000357348 KLHL29Q96CT2 875 aa13.37□□□□□ -0.27
RTFDC1-202ENST00000357348 THOC1Q96FV9 657 aaKnown RBP13.37□□□□□ -0.27
RTFDC1-202ENST00000357348 TSEN34Q9BSV6 310 aaKnown RBP13.37□□□□□ -0.27
RTFDC1-202ENST00000357348 PTPRHQ9HD43 1115 aa13.37□□□□□ -0.27
RTFDC1-202ENST00000357348 RNF19AQ9NV58 838 aa13.37□□□□□ -0.27
RTFDC1-202ENST00000357348 PCDH10Q9P2E7 1040 aa13.37□□□□□ -0.27
RTFDC1-202ENST00000357348 MTUS1Q9ULD2 1270 aa13.37□□□□□ -0.27
RTFDC1-202ENST00000357348 PIN4Q9Y237 131 aaKnown RBP13.37□□□□□ -0.27
RTFDC1-202ENST00000357348 HES2Q9Y543 173 aa13.37□□□□□ -0.27
RTFDC1-202ENST00000357348 CNTNAP2Q9UHC6 1331 aa13.37□□□□□ -0.27
RTFDC1-202ENST00000357348 P4HA2O15460 535 aa13.37□□□□□ -0.27
RTFDC1-202ENST00000357348 KRT16P08779 473 aa13.37□□□□□ -0.27
RTFDC1-202ENST00000357348 GZMAP12544 262 aa13.37□□□□□ -0.27
RTFDC1-202ENST00000357348 TNNI1P19237 187 aa13.37□□□□□ -0.27
RTFDC1-202ENST00000357348 MSH2P43246 934 aa13.37□□□□□ -0.27
RTFDC1-202ENST00000357348 CTCFP49711 727 aaPredicted RBP13.37□□□□□ -0.27
RTFDC1-202ENST00000357348 ARHGAP44Q17R89 818 aa13.37□□□□□ -0.27
RTFDC1-202ENST00000357348 IFNLR1Q8IU57 520 aaPredicted RBP13.37□□□□□ -0.27
RTFDC1-202ENST00000357348 TMEM130Q8N3G9 435 aa13.37□□□□□ -0.27
RTFDC1-202ENST00000357348 FITM2Q8N6M3 262 aa13.37□□□□□ -0.27
RTFDC1-202ENST00000357348 UHMK1Q8TAS1 419 aaKnown RBP13.37□□□□□ -0.27
RTFDC1-202ENST00000357348 PARD3BQ8TEW8 1205 aa13.37□□□□□ -0.27
RTFDC1-202ENST00000357348 DHX38Q92620 1227 aaKnown RBP13.37□□□□□ -0.27
RTFDC1-202ENST00000357348 FBXL18Q96ME1 805 aa13.37□□□□□ -0.27
RTFDC1-202ENST00000357348 LGALS13Q9UHV8 139 aa13.37□□□□□ -0.27
RTFDC1-202ENST00000357348 TNFSF13BQ9Y275 285 aa13.37□□□□□ -0.27
RTFDC1-202ENST00000357348 LAMA2P24043 3122 aaKnown RBP13.37□□□□□ -0.27
RTFDC1-202ENST00000357348 TCRBV7S2A1N4TA0A589 114 aa13.36□□□□□ -0.27
RTFDC1-202ENST00000357348 PROZP22891 400 aa13.36□□□□□ -0.27
RTFDC1-202ENST00000357348 HOXA11P31270 313 aaPredicted RBP13.36□□□□□ -0.27
RTFDC1-202ENST00000357348 CRYBB1P53674 252 aaPredicted RBP13.36□□□□□ -0.27
RTFDC1-202ENST00000357348 MCCD1P59942 119 aaPredicted RBP13.36□□□□□ -0.27
RTFDC1-202ENST00000357348 SATB1Q01826 763 aa13.36□□□□□ -0.27
RTFDC1-202ENST00000357348 MCL1Q07820 350 aa13.36□□□□□ -0.27
RTFDC1-202ENST00000357348 ZKSCAN8Q15776 578 aaPredicted RBP13.36□□□□□ -0.27
RTFDC1-202ENST00000357348 CCDC38Q502W7 563 aa13.36□□□□□ -0.27
RTFDC1-202ENST00000357348 CGB2Q6NT52 195 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms