RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 GARTP22102 1010 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 ELAVL2Q12926 359 aaKnown RBP5.76□□□□□ -1.49
PTPRD-202ENST00000356435 MTA1Q13330 715 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 ZNF211Q13398 564 aaPredicted RBP5.76□□□□□ -1.49
PTPRD-202ENST00000356435 PDIA5Q14554 519 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 PCYOX1LQ8NBM8 494 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 ATL2Q8NHH9 583 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 C1orf54Q8WWF1 131 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 APEX2Q9UBZ4 518 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 TRPC5OSA6NMA1 111 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 NCAM1P13591 858 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 PRIM2P49643 509 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 HIRAP54198 1017 aaPredicted RBP5.76□□□□□ -1.49
PTPRD-202ENST00000356435 VSNL1P62760 191 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 HIBCHQ6NVY1 386 aaPredicted RBP5.76□□□□□ -1.49
PTPRD-202ENST00000356435 CERKQ8TCT0 537 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 AGBL1Q96MI9 1066 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 TRABDQ9H4I3 376 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 TRPM5Q9NZQ8 1165 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 FBXO21O94952 628 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 TDP2O95551 362 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 PDGFRBP09619 1106 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 CHRM3P20309 590 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 SLC45A4Q5BKX6 768 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 C11orf74Q86VG3 221 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 FAM9CQ8IZT9 166 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 EIF1ADQ8N9N8 165 aaKnown RBP5.76□□□□□ -1.49
PTPRD-202ENST00000356435 PRRG3Q9BZD7 231 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 ANKRD26Q9UPS8 1709 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 PPLO60437 1756 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 EVPLLA8MZ36 301 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 H0Y3Z8 333 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 PRLRP16471 622 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 NUP62P37198 522 aaPredicted RBP5.76□□□□□ -1.49
PTPRD-202ENST00000356435 GEMP55040 296 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 SHROOM1Q2M3G4 852 aaPredicted RBP5.76□□□□□ -1.49
PTPRD-202ENST00000356435 LRRC23Q53EV4 343 aaPredicted RBP5.76□□□□□ -1.49
PTPRD-202ENST00000356435 EFCAB12Q6NXP0 572 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 DIS3LQ8TF46 1054 aaKnown RBP5.76□□□□□ -1.49
PTPRD-202ENST00000356435 GRAMD1AQ96CP6 724 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 NMRK2Q9NPI5 230 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 SAE1Q9UBE0 346 aaPredicted RBP5.76□□□□□ -1.49
PTPRD-202ENST00000356435 VPS51Q9UID3 782 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 KPNA6O60684 536 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 RPSAP08865 295 aaKnown RBP5.76□□□□□ -1.49
PTPRD-202ENST00000356435 CYP2C8P10632 490 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 GCLCP48506 637 aaPredicted RBP5.76□□□□□ -1.49
PTPRD-202ENST00000356435 IRAK1P51617 712 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 SLC16A1P53985 500 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 CTXN3Q4LDR2 81 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 USP39Q53GS9 565 aaKnown RBP5.76□□□□□ -1.49
PTPRD-202ENST00000356435 ZNF484Q5JVG2 852 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 TMEM139Q8IV31 216 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 OXER1Q8TDS5 423 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 FBXO32Q969P5 355 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 TMEM245Q9H330 911 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 CPVLQ9H3G5 476 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 PAK5Q9P286 719 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 PLA2G4CQ9UP65 541 aa5.76□□□□□ -1.49
PTPRD-202ENST00000356435 ARHGEF28Q8N1W1 1705 aaKnown RBP5.75□□□□□ -1.49
PTPRD-202ENST00000356435 ASS1P00966 412 aaKnown RBP5.75□□□□□ -1.49
PTPRD-202ENST00000356435 IFNA14P01570 189 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 RRM2P31350 389 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 SSTR3P32745 418 aaPredicted RBP5.75□□□□□ -1.49
PTPRD-202ENST00000356435 RFX3P48380 749 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 MAGOHP61326 146 aaKnown RBP5.75□□□□□ -1.49
PTPRD-202ENST00000356435 RPS7P62081 194 aaKnown RBP5.75□□□□□ -1.49
PTPRD-202ENST00000356435 YWHAZP63104 245 aaKnown RBP5.75□□□□□ -1.49
PTPRD-202ENST00000356435 CSTF3Q12996 717 aaKnown RBP5.75□□□□□ -1.49
PTPRD-202ENST00000356435 PRKAA1Q13131 559 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 ANGPT1Q15389 498 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 HLA-DQA1Q5Y7H0 255 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 LVRNQ6Q4G3 990 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.75□□□□□ -1.49
PTPRD-202ENST00000356435 SYTL1Q8IYJ3 562 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 XPO6Q96QU8 1125 aaKnown RBP5.75□□□□□ -1.49
PTPRD-202ENST00000356435 OSBPL9Q96SU4 736 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 SPASTQ9UBP0 616 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 TUBGCP4Q9UGJ1 667 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 LNPEPQ9UIQ6 1025 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 ZNF229Q9UJW7 825 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 RAB23Q9ULC3 237 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 ZNF839A8K0R7 811 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 TBC1D12O60347 775 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 MTA2O94776 668 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 RENBPP51606 427 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 GEMIN4P57678 1058 aaKnown RBP5.75□□□□□ -1.49
PTPRD-202ENST00000356435 CYB5R4Q7L1T6 521 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 FGD2Q7Z6J4 655 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 LUZP2Q86TE4 346 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 CSGALNACT1Q8TDX6 532 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 FAM167BQ9BTA0 163 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 XPO7Q9UIA9 1087 aaKnown RBP5.75□□□□□ -1.49
PTPRD-202ENST00000356435 VPS28Q9UK41 221 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 LOC102724159A0A0B4J2E5 919 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 NKRFO15226 690 aaKnown RBP eCLIP5.75□□□□□ -1.49
PTPRD-202ENST00000356435 AKAP10O43572 662 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 CKMP06732 381 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 YWHAQP27348 245 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 HSPA9P38646 679 aaKnown RBP5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms