RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 DDR2Q16832 855 aa11.43□□□□□ -0.58
CAPN3-204ENST00000356316 TXNDC8Q6A555 127 aa11.43□□□□□ -0.58
CAPN3-204ENST00000356316 C4orf50Q6ZRC1 276 aa11.43□□□□□ -0.58
CAPN3-204ENST00000356316 PRR23BQ6ZRT6 265 aa11.43□□□□□ -0.58
CAPN3-204ENST00000356316 MON1AQ86VX9 555 aa11.43□□□□□ -0.58
CAPN3-204ENST00000356316 SCN4BQ8IWT1 228 aa11.43□□□□□ -0.58
CAPN3-204ENST00000356316 ADGRF2Q8IZF7 708 aa11.43□□□□□ -0.58
CAPN3-204ENST00000356316 TTC16Q8NEE8 873 aa11.43□□□□□ -0.58
CAPN3-204ENST00000356316 LEO1Q8WVC0 666 aaPredicted RBP11.43□□□□□ -0.58
CAPN3-204ENST00000356316 RMDN1Q96DB5 314 aa11.43□□□□□ -0.58
CAPN3-204ENST00000356316 FNBP1Q96RU3 617 aa11.43□□□□□ -0.58
CAPN3-204ENST00000356316 MMS19Q96T76 1030 aa11.43□□□□□ -0.58
CAPN3-204ENST00000356316 MTMR12Q9C0I1 747 aa11.43□□□□□ -0.58
CAPN3-204ENST00000356316 KIF9Q9HAQ2 790 aa11.43□□□□□ -0.58
CAPN3-204ENST00000356316 TMLHEQ9NVH6 421 aa11.43□□□□□ -0.58
CAPN3-204ENST00000356316 INTS13Q9NVM9 706 aa11.43□□□□□ -0.58
CAPN3-204ENST00000356316 KBTBD4Q9NVX7 518 aa11.43□□□□□ -0.58
CAPN3-204ENST00000356316 FAM13BQ9NYF5 915 aa11.43□□□□□ -0.58
CAPN3-204ENST00000356316 MAGEC2Q9UBF1 373 aaPredicted RBP11.43□□□□□ -0.58
CAPN3-204ENST00000356316 COL4A2P08572 1712 aa11.43□□□□□ -0.58
CAPN3-204ENST00000356316 KIF26AQ9ULI4 1882 aaPredicted RBP11.42□□□□□ -0.58
CAPN3-204ENST00000356316 EIF3DO15371 548 aaKnown RBP eCLIP11.42□□□□□ -0.58
CAPN3-204ENST00000356316 ATG13O75143 517 aa11.42□□□□□ -0.58
CAPN3-204ENST00000356316 YEATS4O95619 227 aa11.42□□□□□ -0.58
CAPN3-204ENST00000356316 HMGA1P17096 107 aaKnown RBP11.42□□□□□ -0.58
CAPN3-204ENST00000356316 ME1P48163 572 aa11.42□□□□□ -0.58
CAPN3-204ENST00000356316 GPR15P49685 360 aa11.42□□□□□ -0.58
CAPN3-204ENST00000356316 WNT7BP56706 349 aa11.42□□□□□ -0.58
CAPN3-204ENST00000356316 SNRPFP62306 86 aaKnown RBP11.42□□□□□ -0.58
CAPN3-204ENST00000356316 GRSF1Q12849 480 aaKnown RBP eCLIP11.42□□□□□ -0.58
CAPN3-204ENST00000356316 RUNX3Q13761 415 aa11.42□□□□□ -0.58
CAPN3-204ENST00000356316 SIM2Q14190 667 aaPredicted RBP11.42□□□□□ -0.58
CAPN3-204ENST00000356316 SOWAHAQ2M3V2 549 aa11.42□□□□□ -0.58
CAPN3-204ENST00000356316 FOXD4L5Q5VV16 416 aaPredicted RBP11.42□□□□□ -0.58
CAPN3-204ENST00000356316 HS2ST1Q7LGA3 356 aa11.42□□□□□ -0.58
CAPN3-204ENST00000356316 WDR49Q8IV35 697 aa11.42□□□□□ -0.58
CAPN3-204ENST00000356316 RDH13Q8NBN7 331 aa11.42□□□□□ -0.58
CAPN3-204ENST00000356316 ZNF507Q8TCN5 953 aa11.42□□□□□ -0.58
CAPN3-204ENST00000356316 FOXD4L4Q8WXT5 416 aaPredicted RBP11.42□□□□□ -0.58
CAPN3-204ENST00000356316 USP13Q92995 863 aaPredicted RBP11.42□□□□□ -0.58
CAPN3-204ENST00000356316 HPS3Q969F9 1004 aa11.42□□□□□ -0.58
CAPN3-204ENST00000356316 FUBP3Q96I24 572 aaKnown RBP eCLIP11.42□□□□□ -0.58
CAPN3-204ENST00000356316 FGFBP2Q9BYJ0 223 aa11.42□□□□□ -0.58
CAPN3-204ENST00000356316 TRIM9Q9C026 710 aa11.42□□□□□ -0.58
CAPN3-204ENST00000356316 TRPC7Q9HCX4 862 aa11.42□□□□□ -0.58
CAPN3-204ENST00000356316 RBM12Q9NTZ6 932 aaKnown RBP11.42□□□□□ -0.58
CAPN3-204ENST00000356316 HSPBP1Q9NZL4 362 aa11.42□□□□□ -0.58
CAPN3-204ENST00000356316 EHD2Q9NZN4 543 aa11.42□□□□□ -0.58
CAPN3-204ENST00000356316 CDH9Q9ULB4 789 aa11.42□□□□□ -0.58
CAPN3-204ENST00000356316 USP18Q9UMW8 372 aa11.42□□□□□ -0.58
CAPN3-204ENST00000356316 DENND4CQ5VZ89 1909 aa11.42□□□□□ -0.58
CAPN3-204ENST00000356316 TRAV19A0A0A6YYK7 116 aa11.41□□□□□ -0.58
CAPN3-204ENST00000356316 PRR5-ARHGAP8B1AHC4 643 aa11.41□□□□□ -0.58
CAPN3-204ENST00000356316 CHURC1-FNTBB4DL54 471 aa11.41□□□□□ -0.58
CAPN3-204ENST00000356316 GABRDO14764 452 aa11.41□□□□□ -0.58
CAPN3-204ENST00000356316 POLR2DO15514 142 aaKnown RBP11.41□□□□□ -0.58
CAPN3-204ENST00000356316 NOL4O94818 638 aa11.41□□□□□ -0.58
CAPN3-204ENST00000356316 CKMP06732 381 aa11.41□□□□□ -0.58
CAPN3-204ENST00000356316 PDGFRBP09619 1106 aa11.41□□□□□ -0.58
CAPN3-204ENST00000356316 USP17L7P0C7H9 530 aa11.41□□□□□ -0.58
CAPN3-204ENST00000356316 DLATP10515 647 aaKnown RBP11.41□□□□□ -0.58
CAPN3-204ENST00000356316 ANXA13P27216 316 aa11.41□□□□□ -0.58
CAPN3-204ENST00000356316 GRIK1P39086 918 aa11.41□□□□□ -0.58
CAPN3-204ENST00000356316 FNTBP49356 437 aa11.41□□□□□ -0.58
CAPN3-204ENST00000356316 PDE6CP51160 858 aa11.41□□□□□ -0.58
CAPN3-204ENST00000356316 ARHGAP8P85298 464 aa11.41□□□□□ -0.58
CAPN3-204ENST00000356316 CYP27A1Q02318 531 aa11.41□□□□□ -0.58
CAPN3-204ENST00000356316 LMNB2Q03252 620 aa11.41□□□□□ -0.58
CAPN3-204ENST00000356316 ZNF268Q14587 947 aaPredicted RBP11.41□□□□□ -0.58
CAPN3-204ENST00000356316 PDGFRLQ15198 375 aa11.41□□□□□ -0.58
CAPN3-204ENST00000356316 E2F4Q16254 413 aa11.41□□□□□ -0.58
CAPN3-204ENST00000356316 SNRNP35Q16560 246 aaKnown RBP11.41□□□□□ -0.58
CAPN3-204ENST00000356316 LPAL2Q16609 132 aa11.41□□□□□ -0.58
CAPN3-204ENST00000356316 RSPO4Q2I0M5 234 aaPredicted RBP11.41□□□□□ -0.58
CAPN3-204ENST00000356316 FOXD4L6Q3SYB3 417 aaPredicted RBP11.41□□□□□ -0.58
CAPN3-204ENST00000356316 CFAP221Q4G0U5 840 aa11.41□□□□□ -0.58
CAPN3-204ENST00000356316 FAM26FQ5R3K3 315 aa11.41□□□□□ -0.58
CAPN3-204ENST00000356316 SDHAF4Q5VUM1 108 aa11.41□□□□□ -0.58
CAPN3-204ENST00000356316 LMBRD2Q68DH5 695 aaPredicted RBP11.41□□□□□ -0.58
CAPN3-204ENST00000356316 HEATR6Q6AI08 1181 aaKnown RBP11.41□□□□□ -0.58
CAPN3-204ENST00000356316 LAIR1Q6GTX8 287 aa11.41□□□□□ -0.58
CAPN3-204ENST00000356316 TXNDC11Q6PKC3 985 aa11.41□□□□□ -0.58
CAPN3-204ENST00000356316 FOXD4L3Q6VB84 417 aaPredicted RBP11.41□□□□□ -0.58
CAPN3-204ENST00000356316 CEP68Q76N32 757 aa11.41□□□□□ -0.58
CAPN3-204ENST00000356316 TMEM150AQ86TG1 271 aa11.41□□□□□ -0.58
CAPN3-204ENST00000356316 LONP2Q86WA8 852 aa11.41□□□□□ -0.58
CAPN3-204ENST00000356316 CBWD2Q8IUF1 395 aa11.41□□□□□ -0.58
CAPN3-204ENST00000356316 HSCBQ8IWL3 235 aa11.41□□□□□ -0.58
CAPN3-204ENST00000356316 EFCAB3Q8N7B9 438 aa11.41□□□□□ -0.58
CAPN3-204ENST00000356316 OR5B17Q8NGF7 314 aa11.41□□□□□ -0.58
CAPN3-204ENST00000356316 TRMT2BQ96GJ1 504 aaKnown RBP11.41□□□□□ -0.58
CAPN3-204ENST00000356316 MYRFLQ96LU7 910 aa11.41□□□□□ -0.58
CAPN3-204ENST00000356316 C7orf25Q9BPX7 421 aa11.41□□□□□ -0.58
CAPN3-204ENST00000356316 FAM83CQ9BQN1 747 aa11.41□□□□□ -0.58
CAPN3-204ENST00000356316 SNX25Q9H3E2 840 aa11.41□□□□□ -0.58
CAPN3-204ENST00000356316 EBF3Q9H4W6 596 aa11.41□□□□□ -0.58
CAPN3-204ENST00000356316 MAGEF1Q9HAY2 307 aa11.41□□□□□ -0.58
CAPN3-204ENST00000356316 SIX4Q9UIU6 781 aa11.41□□□□□ -0.58
CAPN3-204ENST00000356316 CFAP45Q9UL16 551 aa11.41□□□□□ -0.58
CAPN3-204ENST00000356316 CCL26Q9Y258 94 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms