RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 ACO1P21399 889 aaKnown RBP10.63□□□□□ -0.71
PTPRA-203ENST00000356147 GTF2H1P32780 548 aa10.63□□□□□ -0.71
PTPRA-203ENST00000356147 YWHAGP61981 247 aaKnown RBP eCLIP10.63□□□□□ -0.71
PTPRA-203ENST00000356147 GCNT1Q02742 428 aa10.63□□□□□ -0.71
PTPRA-203ENST00000356147 BMPR2Q13873 1038 aa10.63□□□□□ -0.71
PTPRA-203ENST00000356147 MORF4L2Q15014 288 aa10.63□□□□□ -0.71
PTPRA-203ENST00000356147 KBTBD12Q3ZCT8 623 aa10.63□□□□□ -0.71
PTPRA-203ENST00000356147 DACT2Q5SW24 774 aa10.63□□□□□ -0.71
PTPRA-203ENST00000356147 CC2D2BQ6DHV5 1058 aa10.63□□□□□ -0.71
PTPRA-203ENST00000356147 IRGCQ6NXR0 463 aa10.63□□□□□ -0.71
PTPRA-203ENST00000356147 IZUMO2Q6UXV1 221 aa10.63□□□□□ -0.71
PTPRA-203ENST00000356147 ZCCHC23Q6ZST2 131 aa10.63□□□□□ -0.71
PTPRA-203ENST00000356147 ARID3BQ8IVW6 561 aaPredicted RBP10.63□□□□□ -0.71
PTPRA-203ENST00000356147 BANPQ8N9N5 519 aa10.63□□□□□ -0.71
PTPRA-203ENST00000356147 PPFIBP2Q8ND30 876 aa10.63□□□□□ -0.71
PTPRA-203ENST00000356147 FAM81BQ96LP2 452 aa10.63□□□□□ -0.71
PTPRA-203ENST00000356147 RANBP17Q9H2T7 1088 aaKnown RBP10.63□□□□□ -0.71
PTPRA-203ENST00000356147 TLE6Q9H808 572 aa10.63□□□□□ -0.71
PTPRA-203ENST00000356147 MRPL47Q9HD33 250 aaKnown RBP10.63□□□□□ -0.71
PTPRA-203ENST00000356147 WDR35Q9P2L0 1181 aa10.63□□□□□ -0.71
PTPRA-203ENST00000356147 GABBR1Q9UBS5 961 aa10.63□□□□□ -0.71
PTPRA-203ENST00000356147 LNPEPQ9UIQ6 1025 aa10.63□□□□□ -0.71
PTPRA-203ENST00000356147 hCG_1818297A0A087WSY0 165 aa10.63□□□□□ -0.71
PTPRA-203ENST00000356147 PLSCR1O15162 318 aa10.63□□□□□ -0.71
PTPRA-203ENST00000356147 MAP3K7O43318 606 aa10.63□□□□□ -0.71
PTPRA-203ENST00000356147 ZNF862O60290 1169 aa10.63□□□□□ -0.71
PTPRA-203ENST00000356147 ITGBL1O95965 494 aaPredicted RBP10.63□□□□□ -0.71
PTPRA-203ENST00000356147 RPL22P35268 128 aaKnown RBP10.63□□□□□ -0.71
PTPRA-203ENST00000356147 ALDH18A1P54886 795 aaKnown RBP10.63□□□□□ -0.71
PTPRA-203ENST00000356147 CDK16Q00536 496 aa10.63□□□□□ -0.71
PTPRA-203ENST00000356147 PTP4A2Q12974 167 aa10.63□□□□□ -0.71
PTPRA-203ENST00000356147 PTK7Q13308 1070 aa10.63□□□□□ -0.71
PTPRA-203ENST00000356147 CUL2Q13617 745 aa10.63□□□□□ -0.71
PTPRA-203ENST00000356147 OASLQ15646 514 aaKnown RBP10.63□□□□□ -0.71
PTPRA-203ENST00000356147 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.63□□□□□ -0.71
PTPRA-203ENST00000356147 TAS1R3Q7RTX0 852 aa10.63□□□□□ -0.71
PTPRA-203ENST00000356147 KCTD17Q8N5Z5 321 aa10.63□□□□□ -0.71
PTPRA-203ENST00000356147 RBM15BQ8NDT2 890 aaKnown RBP10.63□□□□□ -0.71
PTPRA-203ENST00000356147 JDP2Q8WYK2 163 aa10.63□□□□□ -0.71
PTPRA-203ENST00000356147 CFAP36Q96G28 342 aa10.63□□□□□ -0.71
PTPRA-203ENST00000356147 MASTLQ96GX5 879 aa10.63□□□□□ -0.71
PTPRA-203ENST00000356147 SMYD3Q9H7B4 428 aa10.63□□□□□ -0.71
PTPRA-203ENST00000356147 SAR1AQ9NR31 198 aa10.63□□□□□ -0.71
PTPRA-203ENST00000356147 SENP1Q9P0U3 644 aa10.63□□□□□ -0.71
PTPRA-203ENST00000356147 XPO7Q9UIA9 1087 aaKnown RBP10.63□□□□□ -0.71
PTPRA-203ENST00000356147 TMX2Q9Y320 296 aa10.63□□□□□ -0.71
PTPRA-203ENST00000356147 PIK3R2O00459 728 aa10.62□□□□□ -0.71
PTPRA-203ENST00000356147 UGT1A9O60656 530 aa10.62□□□□□ -0.71
PTPRA-203ENST00000356147 DLDP09622 509 aaKnown RBP10.62□□□□□ -0.71
PTPRA-203ENST00000356147 ELK3P41970 407 aa10.62□□□□□ -0.71
PTPRA-203ENST00000356147 LIG4P49917 911 aa10.62□□□□□ -0.71
PTPRA-203ENST00000356147 ROR2Q01974 943 aaKnown RBP10.62□□□□□ -0.71
PTPRA-203ENST00000356147 LBRQ14739 615 aaKnown RBP10.62□□□□□ -0.71
PTPRA-203ENST00000356147 AOC3Q16853 763 aa10.62□□□□□ -0.71
PTPRA-203ENST00000356147 CES4AQ5XG92 561 aa10.62□□□□□ -0.71
PTPRA-203ENST00000356147 PLEKHA7Q6IQ23 1121 aa10.62□□□□□ -0.71
PTPRA-203ENST00000356147 DNAJC24Q6P3W2 148 aa10.62□□□□□ -0.71
PTPRA-203ENST00000356147 NPNTQ6UXI9 565 aa10.62□□□□□ -0.71
PTPRA-203ENST00000356147 PRPF39Q86UA1 669 aaKnown RBP10.62□□□□□ -0.71
PTPRA-203ENST00000356147 RCOR2Q8IZ40 523 aa10.62□□□□□ -0.71
PTPRA-203ENST00000356147 GALNT15Q8N3T1 639 aa10.62□□□□□ -0.71
PTPRA-203ENST00000356147 ATP11CQ8NB49 1132 aa10.62□□□□□ -0.71
PTPRA-203ENST00000356147 CHURC1Q8WUH1 139 aa10.62□□□□□ -0.71
PTPRA-203ENST00000356147 DCAKDQ8WVC6 231 aa10.62□□□□□ -0.71
PTPRA-203ENST00000356147 ZNF606Q8WXB4 792 aa10.62□□□□□ -0.71
PTPRA-203ENST00000356147 TMEM143Q96AN5 459 aa10.62□□□□□ -0.71
PTPRA-203ENST00000356147 OXNAD1Q96HP4 312 aaPredicted RBP10.62□□□□□ -0.71
PTPRA-203ENST00000356147 TUBGCP5Q96RT8 1024 aa10.62□□□□□ -0.71
PTPRA-203ENST00000356147 SYNCQ9H7C4 482 aa10.62□□□□□ -0.71
PTPRA-203ENST00000356147 UGT1A7Q9HAW7 530 aa10.62□□□□□ -0.71
PTPRA-203ENST00000356147 UGT1A10Q9HAW8 530 aa10.62□□□□□ -0.71
PTPRA-203ENST00000356147 UGT1A8Q9HAW9 530 aa10.62□□□□□ -0.71
PTPRA-203ENST00000356147 PCMTD2Q9NV79 361 aa10.62□□□□□ -0.71
PTPRA-203ENST00000356147 BTAF1O14981 1849 aa10.62□□□□□ -0.71
PTPRA-203ENST00000356147 DCAF8L1A6NGE4 600 aa10.62□□□□□ -0.71
PTPRA-203ENST00000356147 MAPTP10636 758 aaKnown RBP10.62□□□□□ -0.71
PTPRA-203ENST00000356147 RASIP1Q5U651 963 aa10.62□□□□□ -0.71
PTPRA-203ENST00000356147 CCDC33Q8N5R6 958 aa10.62□□□□□ -0.71
PTPRA-203ENST00000356147 PPM1NQ8N819 430 aa10.62□□□□□ -0.71
PTPRA-203ENST00000356147 MZB1Q8WU39 189 aa10.62□□□□□ -0.71
PTPRA-203ENST00000356147 RSAD2Q8WXG1 361 aa10.62□□□□□ -0.71
PTPRA-203ENST00000356147 SKA1Q96BD8 255 aa10.62□□□□□ -0.71
PTPRA-203ENST00000356147 RBM41Q96IZ5 413 aaKnown RBP10.62□□□□□ -0.71
PTPRA-203ENST00000356147 GBP5Q96PP8 586 aa10.62□□□□□ -0.71
PTPRA-203ENST00000356147 IWS1Q96ST2 819 aa10.62□□□□□ -0.71
PTPRA-203ENST00000356147 HAPLN2Q9GZV7 340 aa10.62□□□□□ -0.71
PTPRA-203ENST00000356147 TMX4Q9H1E5 349 aaPredicted RBP10.62□□□□□ -0.71
PTPRA-203ENST00000356147 ARHGEF4Q9NR80 690 aa10.62□□□□□ -0.71
PTPRA-203ENST00000356147 PARVAQ9NVD7 372 aa10.62□□□□□ -0.71
PTPRA-203ENST00000356147 SEPT9Q9UHD8 586 aaPredicted RBP10.62□□□□□ -0.71
PTPRA-203ENST00000356147 SLC24A2Q9UI40 661 aa10.62□□□□□ -0.71
PTPRA-203ENST00000356147 PPM1HQ9ULR3 514 aa10.62□□□□□ -0.71
PTPRA-203ENST00000356147 MYH9P35579 1960 aaKnown RBP10.62□□□□□ -0.71
PTPRA-203ENST00000356147 KBTBD13C9JR72 458 aa10.62□□□□□ -0.71
PTPRA-203ENST00000356147 STK10O94804 968 aaKnown RBP10.62□□□□□ -0.71
PTPRA-203ENST00000356147 CST3P01034 146 aaPredicted RBP10.62□□□□□ -0.71
PTPRA-203ENST00000356147 WEE2P0C1S8 567 aa10.62□□□□□ -0.71
PTPRA-203ENST00000356147 IL1R2P27930 398 aa10.62□□□□□ -0.71
PTPRA-203ENST00000356147 LMNB2Q03252 620 aa10.62□□□□□ -0.71
PTPRA-203ENST00000356147 UBAP2LQ14157 1087 aaKnown RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms