RNA–Protein interactions for RNA: ENST00000356005.8

FN1-204, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-204ENST00000356005 FBXO2Q9UK22 296 aaPredicted RBP11.74□□□□□ -0.53
FN1-204ENST00000356005 SLC15A5A6NIM6 579 aa11.74□□□□□ -0.53
FN1-204ENST00000356005 UBXN8O00124 270 aa11.74□□□□□ -0.53
FN1-204ENST00000356005 ADCY6O43306 1168 aa11.74□□□□□ -0.53
FN1-204ENST00000356005 DDHD2O94830 711 aa11.74□□□□□ -0.53
FN1-204ENST00000356005 MYBP10242 640 aa11.74□□□□□ -0.53
FN1-204ENST00000356005 SLC7A5Q01650 507 aa11.74□□□□□ -0.53
FN1-204ENST00000356005 OVOS1Q6IE37 1185 aa11.74□□□□□ -0.53
FN1-204ENST00000356005 TRIM65Q6PJ69 517 aa11.74□□□□□ -0.53
FN1-204ENST00000356005 C4orf19Q8IY42 314 aa11.74□□□□□ -0.53
FN1-204ENST00000356005 CARNMT1Q8N4J0 409 aa11.74□□□□□ -0.53
FN1-204ENST00000356005 FEZF2Q8TBJ5 459 aa11.74□□□□□ -0.53
FN1-204ENST00000356005 NAF1Q96HR8 494 aaKnown RBP11.74□□□□□ -0.53
FN1-204ENST00000356005 BTBD6Q96KE9 485 aa11.74□□□□□ -0.53
FN1-204ENST00000356005 SYCE1LA8MT33 242 aa11.74□□□□□ -0.53
FN1-204ENST00000356005 ZNF500O60304 480 aaPredicted RBP11.74□□□□□ -0.53
FN1-204ENST00000356005 FGF19O95750 216 aa11.74□□□□□ -0.53
FN1-204ENST00000356005 GUCA1AP43080 201 aaPredicted RBP11.74□□□□□ -0.53
FN1-204ENST00000356005 WDR49Q8IV35 697 aa11.74□□□□□ -0.53
FN1-204ENST00000356005 TADA1Q96BN2 335 aa11.74□□□□□ -0.53
FN1-204ENST00000356005 MCCC1Q96RQ3 725 aaPredicted RBP11.74□□□□□ -0.53
FN1-204ENST00000356005 CIPCQ9C0C6 399 aa11.74□□□□□ -0.53
FN1-204ENST00000356005 CPSF2Q9P2I0 782 aaKnown RBP11.74□□□□□ -0.53
FN1-204ENST00000356005 TSR3Q9UJK0 312 aaKnown RBP11.74□□□□□ -0.53
FN1-204ENST00000356005 NR1D1P20393 614 aa11.74□□□□□ -0.53
FN1-204ENST00000356005 DNAJB2P25686 324 aa11.74□□□□□ -0.53
FN1-204ENST00000356005 FBXO47Q5MNV8 452 aa11.74□□□□□ -0.53
FN1-204ENST00000356005 RIOX2Q8IUF8 465 aa11.74□□□□□ -0.53
FN1-204ENST00000356005 ACER1Q8TDN7 264 aa11.74□□□□□ -0.53
FN1-204ENST00000356005 XPO7Q9UIA9 1087 aaKnown RBP11.74□□□□□ -0.53
FN1-204ENST00000356005 MSH4O15457 936 aa11.74□□□□□ -0.53
FN1-204ENST00000356005 CRTAMO95727 393 aa11.74□□□□□ -0.53
FN1-204ENST00000356005 EPHB2P29323 1055 aa11.74□□□□□ -0.53
FN1-204ENST00000356005 MRNIPQ6NTE8 343 aa11.74□□□□□ -0.53
FN1-204ENST00000356005 SMARCD1Q96GM5 515 aa11.74□□□□□ -0.53
FN1-204ENST00000356005 GOLPH3LQ9H4A5 285 aa11.74□□□□□ -0.53
FN1-204ENST00000356005 GAKO14976 1311 aa11.74□□□□□ -0.53
FN1-204ENST00000356005 SSU72P8A0A1W2PR75 194 aa11.73□□□□□ -0.53
FN1-204ENST00000356005 FAM47DPA6NHR8 397 aa11.73□□□□□ -0.53
FN1-204ENST00000356005 M0QYT0 321 aa11.73□□□□□ -0.53
FN1-204ENST00000356005 STX7O15400 261 aaKnown RBP11.73□□□□□ -0.53
FN1-204ENST00000356005 HNRNPRO43390 633 aaKnown RBP11.73□□□□□ -0.53
FN1-204ENST00000356005 ATP5BP06576 529 aaKnown RBP11.73□□□□□ -0.53
FN1-204ENST00000356005 FAM171A1Q5VUB5 890 aa11.73□□□□□ -0.53
FN1-204ENST00000356005 PHACTR4Q8IZ21 702 aa11.73□□□□□ -0.53
FN1-204ENST00000356005 REPS2Q8NFH8 660 aa11.73□□□□□ -0.53
FN1-204ENST00000356005 ACSF2Q96CM8 615 aaPredicted RBP11.73□□□□□ -0.53
FN1-204ENST00000356005 ELOVL4Q9GZR5 314 aa11.73□□□□□ -0.53
FN1-204ENST00000356005 SCHIP1Q9P0W5 487 aaPredicted RBP11.73□□□□□ -0.53
FN1-204ENST00000356005 ADM5C9JUS6 153 aa11.73□□□□□ -0.53
FN1-204ENST00000356005 CCDC22O60826 627 aa11.73□□□□□ -0.53
FN1-204ENST00000356005 STAT4Q14765 748 aa11.73□□□□□ -0.53
FN1-204ENST00000356005 PLCL1Q15111 1095 aa11.73□□□□□ -0.53
FN1-204ENST00000356005 PDK2Q15119 407 aa11.73□□□□□ -0.53
FN1-204ENST00000356005 IZUMO3Q5VZ72 239 aa11.73□□□□□ -0.53
FN1-204ENST00000356005 ZBED8Q8IZ13 594 aa11.73□□□□□ -0.53
FN1-204ENST00000356005 PDGFCQ9NRA1 345 aa11.73□□□□□ -0.53
FN1-204ENST00000356005 FHOD1Q9Y613 1164 aa11.73□□□□□ -0.53
FN1-204ENST00000356005 CCDC78A2IDD5 438 aa11.73□□□□□ -0.53
FN1-204ENST00000356005 PCDH8O95206 1070 aa11.73□□□□□ -0.53
FN1-204ENST00000356005 SPRP35270 261 aaPredicted RBP11.73□□□□□ -0.53
FN1-204ENST00000356005 PRMT2P55345 433 aa11.73□□□□□ -0.53
FN1-204ENST00000356005 TRMT10CQ7L0Y3 403 aaKnown RBP11.73□□□□□ -0.53
FN1-204ENST00000356005 ANKRD23Q86SG2 305 aa11.73□□□□□ -0.53
FN1-204ENST00000356005 ZDHHC17Q8IUH5 632 aa11.73□□□□□ -0.53
FN1-204ENST00000356005 C17orf53Q8N3J3 647 aaPredicted RBP11.73□□□□□ -0.53
FN1-204ENST00000356005 DNAJB3Q8WWF6 145 aa11.73□□□□□ -0.53
FN1-204ENST00000356005 VPS50Q96JG6 964 aa11.73□□□□□ -0.53
FN1-204ENST00000356005 CCDC3Q9BQI4 270 aa11.73□□□□□ -0.53
FN1-204ENST00000356005 SH2D3AQ9BRG2 576 aa11.73□□□□□ -0.53
FN1-204ENST00000356005 TAF1DQ9H5J8 278 aaPredicted RBP11.73□□□□□ -0.53
FN1-204ENST00000356005 POLD4Q9HCU8 107 aa11.73□□□□□ -0.53
FN1-204ENST00000356005 TRMT6Q9UJA5 497 aaKnown RBP11.73□□□□□ -0.53
FN1-204ENST00000356005 INTUQ9ULD6 942 aa11.73□□□□□ -0.53
FN1-204ENST00000356005 ITIH6Q6UXX5 1313 aa11.73□□□□□ -0.53
FN1-204ENST00000356005 CAPN15O75808 1086 aa11.73□□□□□ -0.53
FN1-204ENST00000356005 LIG3P49916 1009 aa11.73□□□□□ -0.53
FN1-204ENST00000356005 NFIAQ12857 509 aa11.73□□□□□ -0.53
FN1-204ENST00000356005 VGLL4Q14135 290 aa11.73□□□□□ -0.53
FN1-204ENST00000356005 SLFN11Q7Z7L1 901 aa11.73□□□□□ -0.53
FN1-204ENST00000356005 COPS7BQ9H9Q2 264 aaPredicted RBP11.73□□□□□ -0.53
FN1-204ENST00000356005 UCHL3P15374 230 aa11.73□□□□□ -0.53
FN1-204ENST00000356005 CLNS1AP54105 237 aaKnown RBP11.73□□□□□ -0.53
FN1-204ENST00000356005 PMS2P54278 862 aa11.73□□□□□ -0.53
FN1-204ENST00000356005 PRKAA1Q13131 559 aa11.73□□□□□ -0.53
FN1-204ENST00000356005 DDX42Q86XP3 938 aaKnown RBP eCLIP11.73□□□□□ -0.53
FN1-204ENST00000356005 CLMNQ96JQ2 1002 aa11.73□□□□□ -0.53
FN1-204ENST00000356005 CEP19Q96LK0 163 aa11.73□□□□□ -0.53
FN1-204ENST00000356005 RMDN2Q96LZ7 410 aa11.73□□□□□ -0.53
FN1-204ENST00000356005 ZFP42Q96MM3 310 aa11.73□□□□□ -0.53
FN1-204ENST00000356005 APBA2Q99767 749 aa11.73□□□□□ -0.53
FN1-204ENST00000356005 PDE11AQ9HCR9 933 aa11.73□□□□□ -0.53
FN1-204ENST00000356005 KDM4FA0A1W2PPD8 638 aa11.73□□□□□ -0.53
FN1-204ENST00000356005 CLCN3P51790 818 aa11.73□□□□□ -0.53
FN1-204ENST00000356005 KDELC2Q7Z4H8 507 aa11.73□□□□□ -0.53
FN1-204ENST00000356005 PPP1R16AQ96I34 528 aa11.73□□□□□ -0.53
FN1-204ENST00000356005 ELMO2Q96JJ3 720 aa11.73□□□□□ -0.53
FN1-204ENST00000356005 ZNF558Q96NG5 402 aa11.73□□□□□ -0.53
FN1-204ENST00000356005 OSMRQ99650 979 aa11.73□□□□□ -0.53
FN1-204ENST00000356005 C20orf96Q9NUD7 363 aaPredicted RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms