RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 TBC1D22BQ9NU19 505 aa7.62□□□□□ -1.19
VPS13A-201ENST00000355766 MAN1B1Q9UKM7 699 aa7.62□□□□□ -1.19
VPS13A-201ENST00000355766 PADI3Q9ULW8 664 aa7.62□□□□□ -1.19
VPS13A-201ENST00000355766 DUSP12Q9UNI6 340 aa7.62□□□□□ -1.19
VPS13A-201ENST00000355766 TELO2Q9Y4R8 837 aa7.62□□□□□ -1.19
VPS13A-201ENST00000355766 TRPV2Q9Y5S1 764 aa7.62□□□□□ -1.19
VPS13A-201ENST00000355766 HCFC2Q9Y5Z7 792 aa7.62□□□□□ -1.19
VPS13A-201ENST00000355766 UBIAD1Q9Y5Z9 338 aa7.62□□□□□ -1.19
VPS13A-201ENST00000355766 WDR87Q6ZQQ6 2873 aa7.62□□□□□ -1.19
VPS13A-201ENST00000355766 TTC3P53804 2025 aa7.62□□□□□ -1.19
VPS13A-201ENST00000355766 BICDL2A1A5D9 508 aa7.61□□□□□ -1.19
VPS13A-201ENST00000355766 TBKBP1A7MCY6 615 aa7.61□□□□□ -1.19
VPS13A-201ENST00000355766 PSMA7O14818 248 aa7.61□□□□□ -1.19
VPS13A-201ENST00000355766 CBFA2T2O43439 604 aa7.61□□□□□ -1.19
VPS13A-201ENST00000355766 PSMD10O75832 226 aa7.61□□□□□ -1.19
VPS13A-201ENST00000355766 KIF20AO95235 890 aa7.61□□□□□ -1.19
VPS13A-201ENST00000355766 LYPLA2O95372 231 aa7.61□□□□□ -1.19
VPS13A-201ENST00000355766 RPN1P04843 607 aaKnown RBP7.61□□□□□ -1.19
VPS13A-201ENST00000355766 ZNF18P17022 549 aa7.61□□□□□ -1.19
VPS13A-201ENST00000355766 SFNP31947 248 aa7.61□□□□□ -1.19
VPS13A-201ENST00000355766 JAK3P52333 1124 aa7.61□□□□□ -1.19
VPS13A-201ENST00000355766 SP4Q02446 784 aa7.61□□□□□ -1.19
VPS13A-201ENST00000355766 MARCH8Q5T0T0 291 aa7.61□□□□□ -1.19
VPS13A-201ENST00000355766 LCE1DQ5T752 114 aa7.61□□□□□ -1.19
VPS13A-201ENST00000355766 LRFN4Q6PJG9 635 aa7.61□□□□□ -1.19
VPS13A-201ENST00000355766 UNC13DQ70J99 1090 aa7.61□□□□□ -1.19
VPS13A-201ENST00000355766 LUZP1Q86V48 1076 aa7.61□□□□□ -1.19
VPS13A-201ENST00000355766 PLA2G4DQ86XP0 818 aa7.61□□□□□ -1.19
VPS13A-201ENST00000355766 KCT2Q8NC54 265 aa7.61□□□□□ -1.19
VPS13A-201ENST00000355766 ZNF507Q8TCN5 953 aa7.61□□□□□ -1.19
VPS13A-201ENST00000355766 ELMO3Q96BJ8 720 aa7.61□□□□□ -1.19
VPS13A-201ENST00000355766 TMX1Q9H3N1 280 aa7.61□□□□□ -1.19
VPS13A-201ENST00000355766 C12orf49Q9H741 205 aa7.61□□□□□ -1.19
VPS13A-201ENST00000355766 ERVK-5Q9HDB9 667 aa7.61□□□□□ -1.19
VPS13A-201ENST00000355766 NGRNQ9NPE2 291 aaKnown RBP7.61□□□□□ -1.19
VPS13A-201ENST00000355766 JADE2Q9NQC1 790 aa7.61□□□□□ -1.19
VPS13A-201ENST00000355766 BLOC1S4Q9NUP1 217 aa7.61□□□□□ -1.19
VPS13A-201ENST00000355766 TCEAL9Q9UHQ7 104 aa7.61□□□□□ -1.19
VPS13A-201ENST00000355766 RWDD2AQ9UIY3 292 aa7.61□□□□□ -1.19
VPS13A-201ENST00000355766 EP300Q09472 2414 aaPredicted RBP7.61□□□□□ -1.19
VPS13A-201ENST00000355766 FRYLO94915 3013 aa7.61□□□□□ -1.19
VPS13A-201ENST00000355766 CHD6Q8TD26 2715 aa7.6□□□□□ -1.19
VPS13A-201ENST00000355766 CEP250Q9BV73 2442 aa7.6□□□□□ -1.19
VPS13A-201ENST00000355766 NFASCO94856 1347 aa7.6□□□□□ -1.19
VPS13A-201ENST00000355766 USP24Q9UPU5 2620 aa7.6□□□□□ -1.19
VPS13A-201ENST00000355766 CFAP47Q6ZTR5 3102 aa7.6□□□□□ -1.19
VPS13A-201ENST00000355766 FRMD3A2A2Y4 597 aa7.6□□□□□ -1.19
VPS13A-201ENST00000355766 M0QZ92 97 aa7.6□□□□□ -1.19
VPS13A-201ENST00000355766 IPO5O00410 1097 aaKnown RBP7.6□□□□□ -1.19
VPS13A-201ENST00000355766 DKC1O60832 514 aaKnown RBP eCLIP7.6□□□□□ -1.19
VPS13A-201ENST00000355766 GAS7O60861 476 aa7.6□□□□□ -1.19
VPS13A-201ENST00000355766 LRIG2O94898 1065 aa7.6□□□□□ -1.19
VPS13A-201ENST00000355766 SLITRK5O94991 958 aa7.6□□□□□ -1.19
VPS13A-201ENST00000355766 ADCY5O95622 1261 aa7.6□□□□□ -1.19
VPS13A-201ENST00000355766 WEE2P0C1S8 567 aa7.6□□□□□ -1.19
VPS13A-201ENST00000355766 USP17L7P0C7H9 530 aa7.6□□□□□ -1.19
VPS13A-201ENST00000355766 IBSPP21815 317 aaPredicted RBP7.6□□□□□ -1.19
VPS13A-201ENST00000355766 SCP2P22307 547 aa7.6□□□□□ -1.19
VPS13A-201ENST00000355766 MARK3P27448 753 aa7.6□□□□□ -1.19
VPS13A-201ENST00000355766 PPM1AP35813 382 aa7.6□□□□□ -1.19
VPS13A-201ENST00000355766 TCF7P36402 384 aaPredicted RBP7.6□□□□□ -1.19
VPS13A-201ENST00000355766 CCT6AP40227 531 aaKnown RBP7.6□□□□□ -1.19
VPS13A-201ENST00000355766 MRPS9P82933 396 aaKnown RBP7.6□□□□□ -1.19
VPS13A-201ENST00000355766 PAK1Q13153 545 aa7.6□□□□□ -1.19
VPS13A-201ENST00000355766 TDGQ13569 410 aa7.6□□□□□ -1.19
VPS13A-201ENST00000355766 MTMR1Q13613 665 aa7.6□□□□□ -1.19
VPS13A-201ENST00000355766 CUL4BQ13620 913 aa7.6□□□□□ -1.19
VPS13A-201ENST00000355766 NCAPHQ15003 741 aa7.6□□□□□ -1.19
VPS13A-201ENST00000355766 LRCH2Q5VUJ6 765 aa7.6□□□□□ -1.19
VPS13A-201ENST00000355766 SPATA1Q5VX52 437 aa7.6□□□□□ -1.19
VPS13A-201ENST00000355766 NLRX1Q86UT6 975 aa7.6□□□□□ -1.19
VPS13A-201ENST00000355766 SMAP1Q8IYB5 467 aaPredicted RBP7.6□□□□□ -1.19
VPS13A-201ENST00000355766 DCLK2Q8N568 766 aa7.6□□□□□ -1.19
VPS13A-201ENST00000355766 AOPEPQ8N6M6 819 aa7.6□□□□□ -1.19
VPS13A-201ENST00000355766 RIN2Q8WYP3 895 aaPredicted RBP7.6□□□□□ -1.19
VPS13A-201ENST00000355766 DHTKD1Q96HY7 919 aaPredicted RBP7.6□□□□□ -1.19
VPS13A-201ENST00000355766 HSD17B14Q9BPX1 270 aa7.6□□□□□ -1.19
VPS13A-201ENST00000355766 SENP7Q9BQF6 1050 aa7.6□□□□□ -1.19
VPS13A-201ENST00000355766 ZNF577Q9BSK1 485 aa7.6□□□□□ -1.19
VPS13A-201ENST00000355766 TIPINQ9BVW5 301 aa7.6□□□□□ -1.19
VPS13A-201ENST00000355766 TEKT3Q9BXF9 490 aa7.6□□□□□ -1.19
VPS13A-201ENST00000355766 FAM49AQ9H0Q0 323 aaPredicted RBP7.6□□□□□ -1.19
VPS13A-201ENST00000355766 CWH43Q9H720 699 aa7.6□□□□□ -1.19
VPS13A-201ENST00000355766 FBRSQ9HAH7 460 aa7.6□□□□□ -1.19
VPS13A-201ENST00000355766 CYP26B1Q9NR63 512 aa7.6□□□□□ -1.19
VPS13A-201ENST00000355766 TYW1Q9NV66 732 aaKnown RBP7.6□□□□□ -1.19
VPS13A-201ENST00000355766 EXOC1Q9NV70 894 aa7.6□□□□□ -1.19
VPS13A-201ENST00000355766 IMPACTQ9P2X3 320 aa7.6□□□□□ -1.19
VPS13A-201ENST00000355766 PUF60Q9UHX1 559 aaKnown RBP7.6□□□□□ -1.19
VPS13A-201ENST00000355766 DBR1Q9UK59 544 aaKnown RBP7.6□□□□□ -1.19
VPS13A-201ENST00000355766 FBXL21Q9UKT6 434 aa7.6□□□□□ -1.19
VPS13A-201ENST00000355766 PCDHB7Q9Y5E2 793 aa7.6□□□□□ -1.19
VPS13A-201ENST00000355766 UBE4BO95155 1302 aa7.59□□□□□ -1.19
VPS13A-201ENST00000355766 PRAMEF27A3QJZ7 478 aa7.59□□□□□ -1.19
VPS13A-201ENST00000355766 C2orf71A6NGG8 1288 aa7.59□□□□□ -1.19
VPS13A-201ENST00000355766 PP2D1A8MPX8 630 aa7.59□□□□□ -1.19
VPS13A-201ENST00000355766 KLRC4O43908 158 aa7.59□□□□□ -1.19
VPS13A-201ENST00000355766 MGEA5O60502 916 aa7.59□□□□□ -1.19
VPS13A-201ENST00000355766 GAP43P17677 238 aa7.59□□□□□ -1.19
VPS13A-201ENST00000355766 SDHBP21912 280 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms