RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 GFRA3O60609 400 aa17.91■□□□□ 0.46
PDLIM7-201ENST00000355572 ZNF202O95125 648 aa17.91■□□□□ 0.46
PDLIM7-201ENST00000355572 NR3C1P04150 777 aa17.91■□□□□ 0.46
PDLIM7-201ENST00000355572 LHX1P48742 406 aa17.91■□□□□ 0.46
PDLIM7-201ENST00000355572 CDH8P55286 799 aa17.91■□□□□ 0.46
PDLIM7-201ENST00000355572 USP46P62068 366 aa17.91■□□□□ 0.46
PDLIM7-201ENST00000355572 SNRPFP62306 86 aaKnown RBP17.91■□□□□ 0.46
PDLIM7-201ENST00000355572 SMARCB1Q12824 385 aa17.91■□□□□ 0.46
PDLIM7-201ENST00000355572 MYO1EQ12965 1108 aa17.91■□□□□ 0.46
PDLIM7-201ENST00000355572 NFE2Q16621 373 aaPredicted RBP17.91■□□□□ 0.46
PDLIM7-201ENST00000355572 TXNDC11Q6PKC3 985 aa17.91■□□□□ 0.46
PDLIM7-201ENST00000355572 DPH6Q7L8W6 267 aa17.91■□□□□ 0.46
PDLIM7-201ENST00000355572 SMYD4Q8IYR2 804 aaPredicted RBP17.91■□□□□ 0.46
PDLIM7-201ENST00000355572 MAB21L3Q8N8X9 362 aa17.91■□□□□ 0.46
PDLIM7-201ENST00000355572 DEPDC1BQ8WUY9 529 aa17.91■□□□□ 0.46
PDLIM7-201ENST00000355572 SHDQ96IW2 340 aa17.91■□□□□ 0.46
PDLIM7-201ENST00000355572 FNBP1Q96RU3 617 aa17.91■□□□□ 0.46
PDLIM7-201ENST00000355572 TASP1Q9H6P5 420 aa17.91■□□□□ 0.46
PDLIM7-201ENST00000355572 SMYD3Q9H7B4 428 aa17.91■□□□□ 0.46
PDLIM7-201ENST00000355572 USP25Q9UHP3 1055 aa17.91■□□□□ 0.46
PDLIM7-201ENST00000355572 NDRG2Q9UN36 371 aaKnown RBP17.91■□□□□ 0.46
PDLIM7-201ENST00000355572 NOL4O94818 638 aa17.9■□□□□ 0.46
PDLIM7-201ENST00000355572 RHOBTB3O94955 611 aa17.9■□□□□ 0.46
PDLIM7-201ENST00000355572 SP9P0CG40 484 aa17.9■□□□□ 0.46
PDLIM7-201ENST00000355572 BDNFP23560 247 aa17.9■□□□□ 0.46
PDLIM7-201ENST00000355572 CLDN10P78369 228 aa17.9■□□□□ 0.46
PDLIM7-201ENST00000355572 VEPH1Q14D04 833 aa17.9■□□□□ 0.46
PDLIM7-201ENST00000355572 WDR72Q3MJ13 1102 aa17.9■□□□□ 0.46
PDLIM7-201ENST00000355572 CFAP221Q4G0U5 840 aa17.9■□□□□ 0.46
PDLIM7-201ENST00000355572 SLC9A9Q8IVB4 645 aa17.9■□□□□ 0.46
PDLIM7-201ENST00000355572 C1orf210Q8IVY1 113 aa17.9■□□□□ 0.46
PDLIM7-201ENST00000355572 SCN4BQ8IWT1 228 aa17.9■□□□□ 0.46
PDLIM7-201ENST00000355572 SPATA18Q8TC71 538 aa17.9■□□□□ 0.46
PDLIM7-201ENST00000355572 ERCC4Q92889 916 aaPredicted RBP17.9■□□□□ 0.46
PDLIM7-201ENST00000355572 USP13Q92995 863 aaPredicted RBP17.9■□□□□ 0.46
PDLIM7-201ENST00000355572 CLDN23Q96B33 292 aa17.9■□□□□ 0.46
PDLIM7-201ENST00000355572 PCED1BQ96HM7 432 aa17.9■□□□□ 0.46
PDLIM7-201ENST00000355572 MMS19Q96T76 1030 aa17.9■□□□□ 0.46
PDLIM7-201ENST00000355572 GPR88Q9GZN0 384 aa17.9■□□□□ 0.46
PDLIM7-201ENST00000355572 ABCB6Q9NP58 842 aa17.9■□□□□ 0.46
PDLIM7-201ENST00000355572 TRPV5Q9NQA5 729 aa17.9■□□□□ 0.46
PDLIM7-201ENST00000355572 GTSE1Q9NYZ3 720 aa17.9■□□□□ 0.46
PDLIM7-201ENST00000355572 PIAS3Q9Y6X2 628 aa17.9■□□□□ 0.46
PDLIM7-201ENST00000355572 MYOFQ9NZM1 2061 aa17.89■□□□□ 0.45
PDLIM7-201ENST00000355572 OTOL1A6NHN0 477 aaPredicted RBP17.89■□□□□ 0.45
PDLIM7-201ENST00000355572 CLDN5O00501 218 aa17.89■□□□□ 0.45
PDLIM7-201ENST00000355572 PDXKO00764 312 aa17.89■□□□□ 0.45
PDLIM7-201ENST00000355572 ZNF263O14978 683 aa17.89■□□□□ 0.45
PDLIM7-201ENST00000355572 CCNE1P24864 410 aa17.89■□□□□ 0.45
PDLIM7-201ENST00000355572 CDC25CP30307 473 aa17.89■□□□□ 0.45
PDLIM7-201ENST00000355572 PSMD2Q13200 908 aa17.89■□□□□ 0.45
PDLIM7-201ENST00000355572 GAS6Q14393 721 aa17.89■□□□□ 0.45
PDLIM7-201ENST00000355572 MDH1BQ5I0G3 518 aa17.89■□□□□ 0.45
PDLIM7-201ENST00000355572 TSSK4Q6SA08 328 aa17.89■□□□□ 0.45
PDLIM7-201ENST00000355572 SPATA2LQ8IUW3 424 aaPredicted RBP17.89■□□□□ 0.45
PDLIM7-201ENST00000355572 CMTM8Q8IZV2 173 aa17.89■□□□□ 0.45
PDLIM7-201ENST00000355572 IRF7Q92985 503 aa17.89■□□□□ 0.45
PDLIM7-201ENST00000355572 CYP2S1Q96SQ9 504 aa17.89■□□□□ 0.45
PDLIM7-201ENST00000355572 OSBPL6Q9BZF3 934 aa17.89■□□□□ 0.45
PDLIM7-201ENST00000355572 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.89■□□□□ 0.456e-7■■■■■ 66.3
PDLIM7-201ENST00000355572 RBM12Q9NTZ6 932 aaKnown RBP17.89■□□□□ 0.45
PDLIM7-201ENST00000355572 CGNQ9P2M7 1197 aaKnown RBP17.89■□□□□ 0.45
PDLIM7-201ENST00000355572 NXF1Q9UBU9 619 aaKnown RBP17.89■□□□□ 0.45
PDLIM7-201ENST00000355572 HMGXB4Q9UGU5 601 aa17.89■□□□□ 0.45
PDLIM7-201ENST00000355572 CDH9Q9ULB4 789 aa17.89■□□□□ 0.45
PDLIM7-201ENST00000355572 CHADO15335 359 aa17.88■□□□□ 0.45
PDLIM7-201ENST00000355572 TACC1O75410 805 aa17.88■□□□□ 0.45
PDLIM7-201ENST00000355572 STAU1O95793 577 aaKnown RBP17.88■□□□□ 0.45
PDLIM7-201ENST00000355572 PCSK1P29120 753 aa17.88■□□□□ 0.45
PDLIM7-201ENST00000355572 PNOCQ13519 176 aa17.88■□□□□ 0.45
PDLIM7-201ENST00000355572 ZCWPW2Q504Y3 356 aa17.88■□□□□ 0.45
PDLIM7-201ENST00000355572 NAIF1Q69YI7 327 aaPredicted RBP17.88■□□□□ 0.45
PDLIM7-201ENST00000355572 TRIM68Q6AZZ1 485 aa17.88■□□□□ 0.45
PDLIM7-201ENST00000355572 SPOPLQ6IQ16 392 aa17.88■□□□□ 0.45
PDLIM7-201ENST00000355572 SCARA5Q6ZMJ2 495 aa17.88■□□□□ 0.45
PDLIM7-201ENST00000355572 FMR1NBQ8N0W7 255 aaPredicted RBP17.88■□□□□ 0.45
PDLIM7-201ENST00000355572 OR6B3Q8NGW1 331 aa17.88■□□□□ 0.45
PDLIM7-201ENST00000355572 TMEM174Q8WUU8 243 aa17.88■□□□□ 0.45
PDLIM7-201ENST00000355572 ZNF518BQ9C0D4 1074 aa17.88■□□□□ 0.45
PDLIM7-201ENST00000355572 SCAND2PQ9GZW5 306 aaPredicted RBP17.88■□□□□ 0.45
PDLIM7-201ENST00000355572 HPS4Q9NQG7 708 aa17.88■□□□□ 0.45
PDLIM7-201ENST00000355572 C2orf42Q9NWW7 574 aa17.88■□□□□ 0.45
PDLIM7-201ENST00000355572 TRAF3IP3Q9Y228 551 aa17.88■□□□□ 0.45
PDLIM7-201ENST00000355572 EML5Q05BV3 1969 aa17.88■□□□□ 0.45
PDLIM7-201ENST00000355572 C2orf78A6NCI8 922 aa17.87■□□□□ 0.45
PDLIM7-201ENST00000355572 AKAP3O75969 853 aa17.87■□□□□ 0.45
PDLIM7-201ENST00000355572 TRIM49P0CI25 452 aa17.87■□□□□ 0.45
PDLIM7-201ENST00000355572 TRIM49CP0CI26 452 aa17.87■□□□□ 0.45
PDLIM7-201ENST00000355572 CSH1P0DML2 217 aa17.87■□□□□ 0.45
PDLIM7-201ENST00000355572 CSH2P0DML3 217 aa17.87■□□□□ 0.45
PDLIM7-201ENST00000355572 CHRNB1P11230 501 aa17.87■□□□□ 0.45
PDLIM7-201ENST00000355572 WEE1P30291 646 aa17.87■□□□□ 0.45
PDLIM7-201ENST00000355572 GNL1P36915 607 aaPredicted RBP17.87■□□□□ 0.45
PDLIM7-201ENST00000355572 MAGEA11P43364 429 aa17.87■□□□□ 0.45
PDLIM7-201ENST00000355572 ZXDBP98169 803 aa17.87■□□□□ 0.45
PDLIM7-201ENST00000355572 CYP27A1Q02318 531 aa17.87■□□□□ 0.45
PDLIM7-201ENST00000355572 ORC1Q13415 861 aa17.87■□□□□ 0.45
PDLIM7-201ENST00000355572 ARHGAP15Q53QZ3 475 aa17.87■□□□□ 0.45
PDLIM7-201ENST00000355572 CEP135Q66GS9 1140 aa17.87■□□□□ 0.45
PDLIM7-201ENST00000355572 ZNF852Q6ZMS4 543 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms