RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 NFRKBQ6P4R8 1299 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 TTC23LQ6PF05 361 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 NET1Q7Z628 596 aaPredicted RBP8.33□□□□□ -1.08
HTT-201ENST00000355072 MYDGFQ969H8 173 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 GINM1Q9NU53 330 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 GTSE1Q9NYZ3 720 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 LEMD3Q9Y2U8 911 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 P4HBP07237 508 aaKnown RBP8.33□□□□□ -1.08
HTT-201ENST00000355072 NR3C2P08235 984 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 PHKA2P46019 1235 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 NR1I3Q14994 352 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 ZNF667Q5HYK9 610 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 NEDD1Q8NHV4 660 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 ZBTB10Q96DT7 871 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 LMTK2Q8IWU2 1503 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 SEC24BO95487 1268 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 ALX1Q15699 326 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 MARK2Q7KZI7 788 aaKnown RBP8.33□□□□□ -1.08
HTT-201ENST00000355072 POLNQ7Z5Q5 900 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 ZNF560Q96MR9 790 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 SLC39A8Q9C0K1 460 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 LRRC74AQ0VAA2 488 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 PDK1Q15118 436 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 LPCAT2Q7L5N7 544 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 AVENQ9NQS1 362 aaPredicted RBP8.33□□□□□ -1.08
HTT-201ENST00000355072 TGDSO95455 350 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 BNIP2Q12982 314 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 MXD4Q14582 209 aaPredicted RBP8.33□□□□□ -1.08
HTT-201ENST00000355072 SCYL2Q6P3W7 929 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 PADI6Q6TGC4 694 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 PEG10Q86TG7 708 aaKnown RBP8.33□□□□□ -1.08
HTT-201ENST00000355072 FMR1NBQ8N0W7 255 aaPredicted RBP8.33□□□□□ -1.08
HTT-201ENST00000355072 TMEM161AQ9NX61 479 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 BARHL2Q9NY43 387 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 NEU2Q9Y3R4 380 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 PCDHGA3Q9Y5H0 932 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 TMEM114B3SHH9 223 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 MDM4O15151 490 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 ETFBP38117 255 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 RPL3P39023 403 aaKnown RBP8.33□□□□□ -1.08
HTT-201ENST00000355072 MCL1Q07820 350 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 TRAP1Q12931 704 aaKnown RBP8.33□□□□□ -1.08
HTT-201ENST00000355072 FAM189A2Q15884 450 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 DDI2Q5TDH0 399 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 DNAAF5Q86Y56 855 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 CCDC60Q8IWA6 550 aaPredicted RBP8.33□□□□□ -1.08
HTT-201ENST00000355072 DEPDC4Q8N2C3 294 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 SAMD3Q8N6K7 520 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 IGSF9BQ9UPX0 1349 aa8.33□□□□□ -1.08
HTT-201ENST00000355072 FAM220BPB1ANY3 271 aa8.32□□□□□ -1.08
HTT-201ENST00000355072 BTN3A3O00478 584 aa8.32□□□□□ -1.08
HTT-201ENST00000355072 TEX28O15482 410 aa8.32□□□□□ -1.08
HTT-201ENST00000355072 LONP2Q86WA8 852 aa8.32□□□□□ -1.08
HTT-201ENST00000355072 USP6P35125 1406 aa8.32□□□□□ -1.08
HTT-201ENST00000355072 MAGI3Q5TCQ9 1506 aa8.32□□□□□ -1.08
HTT-201ENST00000355072 NLRP1Q9C000 1473 aa8.32□□□□□ -1.08
HTT-201ENST00000355072 CHP2O43745 196 aa8.32□□□□□ -1.08
HTT-201ENST00000355072 LRRN2O75325 713 aa8.32□□□□□ -1.08
HTT-201ENST00000355072 MFSD14BQ5SR56 506 aa8.32□□□□□ -1.08
HTT-201ENST00000355072 BROXQ5VW32 411 aa8.32□□□□□ -1.08
HTT-201ENST00000355072 NSUN7Q8NE18 718 aaKnown RBP8.32□□□□□ -1.08
HTT-201ENST00000355072 C21orf2O43822 256 aa8.32□□□□□ -1.08
HTT-201ENST00000355072 PPP2R1BP30154 601 aa8.32□□□□□ -1.08
HTT-201ENST00000355072 EAPPQ56P03 285 aaPredicted RBP8.32□□□□□ -1.08
HTT-201ENST00000355072 ZDHHC13Q8IUH4 622 aa8.32□□□□□ -1.08
HTT-201ENST00000355072 FAM162AQ96A26 154 aa8.32□□□□□ -1.08
HTT-201ENST00000355072 MYLPFQ96A32 169 aa8.32□□□□□ -1.08
HTT-201ENST00000355072 ZNF512BQ96KM6 892 aaPredicted RBP8.32□□□□□ -1.08
HTT-201ENST00000355072 PNMA6EA0A0J9YXQ4 647 aa8.32□□□□□ -1.08
HTT-201ENST00000355072 REM1O75628 298 aa8.32□□□□□ -1.08
HTT-201ENST00000355072 ABRAXAS1Q6UWZ7 409 aa8.32□□□□□ -1.08
HTT-201ENST00000355072 TAS2R42Q7RTR8 314 aa8.32□□□□□ -1.08
HTT-201ENST00000355072 ELMOD1Q8N336 334 aa8.32□□□□□ -1.08
HTT-201ENST00000355072 SNX31Q8N9S9 440 aa8.32□□□□□ -1.08
HTT-201ENST00000355072 ZNF333Q96JL9 665 aa8.32□□□□□ -1.08
HTT-201ENST00000355072 BTBD10Q9BSF8 475 aa8.32□□□□□ -1.08
HTT-201ENST00000355072 CHST10O43529 356 aa8.32□□□□□ -1.08
HTT-201ENST00000355072 FARP2O94887 1054 aaPredicted RBP8.32□□□□□ -1.08
HTT-201ENST00000355072 EIF5AP63241 154 aaKnown RBP8.32□□□□□ -1.08
HTT-201ENST00000355072 SNAP47Q5SQN1 464 aa8.32□□□□□ -1.08
HTT-201ENST00000355072 CYP39A1Q9NYL5 469 aa8.32□□□□□ -1.08
HTT-201ENST00000355072 POLG2Q9UHN1 485 aa8.32□□□□□ -1.08
HTT-201ENST00000355072 AKAP8O43823 692 aaKnown RBP8.32□□□□□ -1.08
HTT-201ENST00000355072 EXOSC10Q01780 885 aaKnown RBP8.32□□□□□ -1.08
HTT-201ENST00000355072 TRIM25Q14258 630 aaKnown RBP8.32□□□□□ -1.08
HTT-201ENST00000355072 ATP6AP1LQ52LC2 224 aa8.32□□□□□ -1.08
HTT-201ENST00000355072 DCAF4Q8WV16 495 aa8.32□□□□□ -1.08
HTT-201ENST00000355072 KCNN2Q9H2S1 579 aa8.32□□□□□ -1.08
HTT-201ENST00000355072 CYP4F11Q9HBI6 524 aa8.32□□□□□ -1.08
HTT-201ENST00000355072 METTL5Q9NRN9 209 aaKnown RBP8.32□□□□□ -1.08
HTT-201ENST00000355072 L1RE1Q9UN81 338 aa8.32□□□□□ -1.08
HTT-201ENST00000355072 SNPHO15079 494 aa8.32□□□□□ -1.08
HTT-201ENST00000355072 TLR2O60603 784 aa8.32□□□□□ -1.08
HTT-201ENST00000355072 SOAT2O75908 522 aa8.32□□□□□ -1.08
HTT-201ENST00000355072 DNAJB5O75953 348 aa8.32□□□□□ -1.08
HTT-201ENST00000355072 UQCRBP14927 111 aa8.32□□□□□ -1.08
HTT-201ENST00000355072 TCF4P15884 667 aa8.32□□□□□ -1.08
HTT-201ENST00000355072 GRK3P35626 688 aa8.32□□□□□ -1.08
HTT-201ENST00000355072 ZCCHC7Q8N3Z6 543 aaKnown RBP8.32□□□□□ -1.08
HTT-201ENST00000355072 RNF139Q8WU17 664 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms