RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 DAAM2Q86T65 1068 aa16.5■□□□□ 0.23
CTSA-202ENST00000354880 THEM5Q8N1Q8 247 aa16.5■□□□□ 0.23
CTSA-202ENST00000354880 ZNF689Q96CS4 500 aaPredicted RBP16.5■□□□□ 0.23
CTSA-202ENST00000354880 HNRNPABQ99729 332 aaKnown RBP16.5■□□□□ 0.23
CTSA-202ENST00000354880 RTP3Q9BQQ7 232 aa16.5■□□□□ 0.23
CTSA-202ENST00000354880 SYNCQ9H7C4 482 aa16.5■□□□□ 0.23
CTSA-202ENST00000354880 MRPL47Q9HD33 250 aaKnown RBP16.5■□□□□ 0.23
CTSA-202ENST00000354880 CRTAC1Q9NQ79 661 aa16.5■□□□□ 0.23
CTSA-202ENST00000354880 SCINQ9Y6U3 715 aa16.5■□□□□ 0.23
CTSA-202ENST00000354880 FTCDO95954 541 aa16.49■□□□□ 0.23
CTSA-202ENST00000354880 SETSIPP0DME0 302 aa16.49■□□□□ 0.23
CTSA-202ENST00000354880 BCAT1P54687 386 aa16.49■□□□□ 0.23
CTSA-202ENST00000354880 FPGSQ05932 587 aa16.49■□□□□ 0.23
CTSA-202ENST00000354880 BST2Q10589 180 aaKnown RBP16.49■□□□□ 0.23
CTSA-202ENST00000354880 CCDC142Q17RM4 750 aa16.49■□□□□ 0.23
CTSA-202ENST00000354880 MDH1BQ5I0G3 518 aa16.49■□□□□ 0.23
CTSA-202ENST00000354880 FAM117BQ6P1L5 589 aa16.49■□□□□ 0.23
CTSA-202ENST00000354880 C16orf59Q7L2K0 433 aa16.49■□□□□ 0.23
CTSA-202ENST00000354880 SLFN11Q7Z7L1 901 aa16.49■□□□□ 0.23
CTSA-202ENST00000354880 C18orf8Q96DM3 657 aa16.49■□□□□ 0.23
CTSA-202ENST00000354880 GOLPH3Q9H4A6 298 aa16.49■□□□□ 0.23
CTSA-202ENST00000354880 ST7Q9NRC1 585 aa16.49■□□□□ 0.23
CTSA-202ENST00000354880 PARVAQ9NVD7 372 aa16.49■□□□□ 0.23
CTSA-202ENST00000354880 MARCH5Q9NX47 278 aa16.49■□□□□ 0.23
CTSA-202ENST00000354880 NT5C1B-RDH14C9J2C7 533 aa16.49■□□□□ 0.23
CTSA-202ENST00000354880 SYN3O14994 580 aa16.49■□□□□ 0.23
CTSA-202ENST00000354880 FGBP02675 491 aa16.49■□□□□ 0.23
CTSA-202ENST00000354880 TKTP29401 623 aaKnown RBP16.49■□□□□ 0.23
CTSA-202ENST00000354880 PBX3P40426 434 aa16.49■□□□□ 0.23
CTSA-202ENST00000354880 GABRB2P47870 512 aa16.49■□□□□ 0.23
CTSA-202ENST00000354880 ALDH7A1P49419 539 aaKnown RBP16.49■□□□□ 0.23
CTSA-202ENST00000354880 BCAR1P56945 870 aa16.49■□□□□ 0.23
CTSA-202ENST00000354880 PDE4CQ08493 712 aa16.49■□□□□ 0.23
CTSA-202ENST00000354880 MAMLD1Q13495 774 aa16.49■□□□□ 0.23
CTSA-202ENST00000354880 CYP4A22Q5TCH4 519 aa16.49■□□□□ 0.23
CTSA-202ENST00000354880 PAPD7Q5XG87 772 aaKnown RBP16.49■□□□□ 0.23
CTSA-202ENST00000354880 TMCO2Q7Z6W1 182 aaPredicted RBP16.49■□□□□ 0.23
CTSA-202ENST00000354880 FUKQ8N0W3 1084 aa16.49■□□□□ 0.23
CTSA-202ENST00000354880 MYCBPAPQ8TBZ2 947 aa16.49■□□□□ 0.23
CTSA-202ENST00000354880 IPO4Q8TEX9 1081 aaKnown RBP16.49■□□□□ 0.23
CTSA-202ENST00000354880 SLC35F5Q8WV83 523 aa16.49■□□□□ 0.23
CTSA-202ENST00000354880 CWH43Q9H720 699 aa16.49■□□□□ 0.23
CTSA-202ENST00000354880 RC3H2Q9HBD1 1191 aaKnown RBP16.49■□□□□ 0.23
CTSA-202ENST00000354880 COL4A6Q14031 1691 aa16.49■□□□□ 0.23
CTSA-202ENST00000354880 SF3B1O75533 1304 aaKnown RBP eCLIP16.48■□□□□ 0.23
CTSA-202ENST00000354880 MYBPHLA2RUH7 354 aa16.48■□□□□ 0.23
CTSA-202ENST00000354880 ZBBXA8MT70 800 aa16.48■□□□□ 0.23
CTSA-202ENST00000354880 PLCB3Q01970 1234 aa16.48■□□□□ 0.23
CTSA-202ENST00000354880 ELAVL2Q12926 359 aaKnown RBP16.48■□□□□ 0.23
CTSA-202ENST00000354880 INTS6LQ5JSJ4 861 aaKnown RBP16.48■□□□□ 0.23
CTSA-202ENST00000354880 MEI1Q5TIA1 1274 aa16.48■□□□□ 0.23
CTSA-202ENST00000354880 C11orf63Q6NUN7 778 aa16.48■□□□□ 0.23
CTSA-202ENST00000354880 PMF1Q6P1K2 205 aa16.48■□□□□ 0.23
CTSA-202ENST00000354880 DNAJC24Q6P3W2 148 aa16.48■□□□□ 0.23
CTSA-202ENST00000354880 ZNF365Q70YC5 407 aa16.48■□□□□ 0.23
CTSA-202ENST00000354880 C3orf20Q8ND61 904 aa16.48■□□□□ 0.23
CTSA-202ENST00000354880 STK32AQ8WU08 396 aa16.48■□□□□ 0.23
CTSA-202ENST00000354880 PCED1BQ96HM7 432 aa16.48■□□□□ 0.23
CTSA-202ENST00000354880 MED10Q9BTT4 135 aa16.48■□□□□ 0.23
CTSA-202ENST00000354880 HTATIP2Q9BUP3 242 aa16.48■□□□□ 0.23
CTSA-202ENST00000354880 GPR62Q9BZJ7 368 aa16.48■□□□□ 0.23
CTSA-202ENST00000354880 MIS12Q9H081 205 aa16.48■□□□□ 0.23
CTSA-202ENST00000354880 WDR35Q9P2L0 1181 aa16.48■□□□□ 0.23
CTSA-202ENST00000354880 TJP2Q9UDY2 1190 aa16.48■□□□□ 0.23
CTSA-202ENST00000354880 ANAPC7Q9UJX3 599 aa16.48■□□□□ 0.23
CTSA-202ENST00000354880 TCRBV5S1A1TA0A578 114 aa16.47■□□□□ 0.23
CTSA-202ENST00000354880 TULP2O00295 520 aa16.47■□□□□ 0.23
CTSA-202ENST00000354880 CLDN5O00501 218 aa16.47■□□□□ 0.23
CTSA-202ENST00000354880 CAPN15O75808 1086 aa16.47■□□□□ 0.23
CTSA-202ENST00000354880 OAZ2O95190 189 aa16.47■□□□□ 0.23
CTSA-202ENST00000354880 ERBB2P04626 1255 aa16.47■□□□□ 0.23
CTSA-202ENST00000354880 GSCP56915 257 aaPredicted RBP16.47■□□□□ 0.23
CTSA-202ENST00000354880 SLC8A3P57103 927 aa16.47■□□□□ 0.23
CTSA-202ENST00000354880 AMPD2Q01433 879 aa16.47■□□□□ 0.23
CTSA-202ENST00000354880 TSPY1Q01534 308 aa16.47■□□□□ 0.23
CTSA-202ENST00000354880 ZNF268Q14587 947 aaPredicted RBP16.47■□□□□ 0.23
CTSA-202ENST00000354880 FAM171A1Q5VUB5 890 aa16.47■□□□□ 0.23
CTSA-202ENST00000354880 FUT10Q6P4F1 479 aa16.47■□□□□ 0.23
CTSA-202ENST00000354880 FAM171BQ6P995 826 aa16.47■□□□□ 0.23
CTSA-202ENST00000354880 PAQR9Q6ZVX9 377 aa16.47■□□□□ 0.23
CTSA-202ENST00000354880 PEX26Q7Z412 305 aa16.47■□□□□ 0.23
CTSA-202ENST00000354880 TMEM173Q86WV6 379 aaPredicted RBP16.47■□□□□ 0.23
CTSA-202ENST00000354880 XYLT1Q86Y38 959 aa16.47■□□□□ 0.23
CTSA-202ENST00000354880 OR10T2Q8NGX3 314 aa16.47■□□□□ 0.23
CTSA-202ENST00000354880 TLR10Q9BXR5 811 aa16.47■□□□□ 0.23
CTSA-202ENST00000354880 DUSP16Q9BY84 665 aa16.47■□□□□ 0.23
CTSA-202ENST00000354880 B3GNT5Q9BYG0 378 aa16.47■□□□□ 0.23
CTSA-202ENST00000354880 ABCB6Q9NP58 842 aa16.47■□□□□ 0.23
CTSA-202ENST00000354880 SAR1BQ9Y6B6 198 aa16.47■□□□□ 0.23
CTSA-202ENST00000354880 VWA8A3KMH1 1905 aa16.47■□□□□ 0.23
CTSA-202ENST00000354880 E5RJQ4 531 aa16.47■□□□□ 0.23
CTSA-202ENST00000354880 MYO1FO00160 1098 aa16.47■□□□□ 0.23
CTSA-202ENST00000354880 NCK2O43639 380 aa16.47■□□□□ 0.23
CTSA-202ENST00000354880 RGS7P49802 495 aa16.47■□□□□ 0.23
CTSA-202ENST00000354880 SNX16P57768 344 aa16.47■□□□□ 0.23
CTSA-202ENST00000354880 MESDQ14696 234 aa16.47■□□□□ 0.23
CTSA-202ENST00000354880 NT5DC3Q86UY8 548 aa16.47■□□□□ 0.23
CTSA-202ENST00000354880 BTBD6Q96KE9 485 aa16.47■□□□□ 0.23
CTSA-202ENST00000354880 SLC4A5Q9BY07 1137 aa16.47■□□□□ 0.23
CTSA-202ENST00000354880 L2HGDHQ9H9P8 463 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms