RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 HGFP14210 728 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 VIPR1P32241 457 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 NPTX2P47972 431 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 MAN2A2P49641 1150 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 ZNF134P52741 427 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 EPHB3P54753 998 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 NRG3P56975 720 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 ATP2C1P98194 919 aaPredicted RBP1.87□□□□□ -2.11
BRCA1-202ENST00000354071 NFATC3Q12968 1075 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 ERV3-1Q14264 604 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 TMEM200BQ69YZ2 307 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 SLC30A10Q6XR72 485 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 H1FNTQ75WM6 255 aaPredicted RBP1.87□□□□□ -2.11
BRCA1-202ENST00000354071 CLEC14AQ86T13 490 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 ZFPM1Q8IX07 1006 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 LINS1Q8NG48 757 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 TMEM171Q8WVE6 324 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 TSPAN17Q96FV3 270 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 RSRC1Q96IZ7 334 aaKnown RBP1.87□□□□□ -2.11
BRCA1-202ENST00000354071 UIMC1Q96RL1 719 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 TWNKQ96RR1 684 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 MRI1Q9BV20 369 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 VPS16Q9H269 839 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 RNPEPQ9H4A4 650 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 CHODLQ9H9P2 273 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 CNNM1Q9NRU3 951 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 IRAK4Q9NWZ3 460 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 Q9UFV3 132 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 VAV3Q9UKW4 847 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 DNAJC16Q9Y2G8 782 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 TAF5LO75529 589 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 KNG1P01042 644 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 HMGCRP04035 888 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 PIM1P11309 404 aaPredicted RBP1.87□□□□□ -2.11
BRCA1-202ENST00000354071 CPA1P15085 419 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 FGFR4P22455 802 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 CST5P28325 142 aaPredicted RBP1.87□□□□□ -2.11
BRCA1-202ENST00000354071 SESN2P58004 480 aaPredicted RBP1.87□□□□□ -2.11
BRCA1-202ENST00000354071 FAM3BP58499 235 aaPredicted RBP1.87□□□□□ -2.11
BRCA1-202ENST00000354071 ERVFRD-1P60508 538 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 UBE3AQ05086 875 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 MAPK7Q13164 816 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 KIF22Q14807 665 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 NPY5RQ15761 445 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 EMC10Q5UCC4 262 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 LMBRD2Q68DH5 695 aaPredicted RBP1.87□□□□□ -2.11
BRCA1-202ENST00000354071 ZC3H14Q6PJT7 736 aaKnown RBP1.87□□□□□ -2.11
BRCA1-202ENST00000354071 BEND5Q7L4P6 421 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 FRMD5Q7Z6J6 570 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 PDPRQ8NCN5 879 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 TDRD7Q8NHU6 1098 aaKnown RBP1.87□□□□□ -2.11
BRCA1-202ENST00000354071 GOLGA1Q92805 767 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 PHACTR3Q96KR7 559 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 KLHL32Q96NJ5 620 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 MED15Q96RN5 788 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 NDC1Q9BTX1 674 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 AP1M1Q9BXS5 423 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 ZNF518BQ9C0D4 1074 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 GSTO2Q9H4Y5 243 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 MANSC1Q9H8J5 431 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 ZCCHC17Q9NP64 241 aaKnown RBP1.87□□□□□ -2.11
BRCA1-202ENST00000354071 SAE1Q9UBE0 346 aaPredicted RBP1.87□□□□□ -2.11
BRCA1-202ENST00000354071 NUDT5Q9UKK9 219 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 CAMK2AQ9UQM7 478 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 TARBP1Q13395 1621 aaKnown RBP1.87□□□□□ -2.11
BRCA1-202ENST00000354071 ADCY10Q96PN6 1610 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 TOR1BO14657 336 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 TGFB1I1O43294 461 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 RRP9O43818 475 aaKnown RBP1.87□□□□□ -2.11
BRCA1-202ENST00000354071 AGFG2O95081 481 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 ITGA2BP08514 1039 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 PDHA1P08559 390 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 ACSL1P33121 698 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 HOXD12P35452 270 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 ARL4AP40617 200 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 HADHAP40939 763 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 KCNC1P48547 511 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 MRE11P49959 708 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 CCR9P51686 369 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 SETQ01105 290 aaPredicted RBP1.87□□□□□ -2.11
BRCA1-202ENST00000354071 MC2RQ01718 297 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 SCAPQ12770 1279 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 PLCL1Q15111 1095 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 PCOLCEQ15113 449 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 TBCEQ15813 527 aaPredicted RBP1.87□□□□□ -2.11
BRCA1-202ENST00000354071 ANKRD45Q5TZF3 282 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 PLAG1Q6DJT9 500 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 B4GALNT4Q76KP1 1039 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 ZNF572Q7Z3I7 529 aaPredicted RBP1.87□□□□□ -2.11
BRCA1-202ENST00000354071 USP37Q86T82 979 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 CREBRFQ8IUR6 639 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 LSMEM1Q8N8F7 131 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 SPPL3Q8TCT6 385 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 SMCR8Q8TEV9 937 aaPredicted RBP1.87□□□□□ -2.11
BRCA1-202ENST00000354071 RSAD2Q8WXG1 361 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 SPSB4Q96A44 273 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 PERPQ96FX8 193 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 TRAPPC9Q96Q05 1148 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 GPHA2Q96T91 129 aa1.87□□□□□ -2.11
BRCA1-202ENST00000354071 MPHOSPH8Q99549 860 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms