RNA–Protein interactions for RNA: ENST00000353479.9

COL17A1-201, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL17A1, Length 5,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-201ENST00000353479 RPL10AP62906 217 aaKnown RBP15.55■□□□□ 0.08
COL17A1-201ENST00000353479 KCNA1Q09470 495 aa15.55■□□□□ 0.08
COL17A1-201ENST00000353479 DDX42Q86XP3 938 aaKnown RBP eCLIP15.55■□□□□ 0.08
COL17A1-201ENST00000353479 EMC1Q8N766 993 aa15.55■□□□□ 0.08
COL17A1-201ENST00000353479 RUBCNQ92622 972 aa15.55■□□□□ 0.08
COL17A1-201ENST00000353479 PTPRN2Q92932 1015 aa15.55■□□□□ 0.08
COL17A1-201ENST00000353479 RMDN2Q96LZ7 410 aa15.55■□□□□ 0.08
COL17A1-201ENST00000353479 ALG13Q9NP73 1137 aaKnown RBP15.55■□□□□ 0.08
COL17A1-201ENST00000353479 KANSL3Q9P2N6 904 aa15.55■□□□□ 0.08
COL17A1-201ENST00000353479 ADAM21Q9UKJ8 722 aa15.55■□□□□ 0.08
COL17A1-201ENST00000353479 GZMAP12544 262 aa15.55■□□□□ 0.08
COL17A1-201ENST00000353479 ITGA8P53708 1063 aa15.55■□□□□ 0.08
COL17A1-201ENST00000353479 FKBP1BP68106 108 aa15.55■□□□□ 0.08
COL17A1-201ENST00000353479 LONRF1Q17RB8 773 aa15.55■□□□□ 0.08
COL17A1-201ENST00000353479 THEMIS2Q5TEJ8 643 aa15.55■□□□□ 0.08
COL17A1-201ENST00000353479 OVOS1Q6IE37 1185 aa15.55■□□□□ 0.08
COL17A1-201ENST00000353479 TFB1MQ8WVM0 346 aaKnown RBP15.55■□□□□ 0.08
COL17A1-201ENST00000353479 DCTN3O75935 186 aa15.55■□□□□ 0.08
COL17A1-201ENST00000353479 FGRP09769 529 aa15.55■□□□□ 0.08
COL17A1-201ENST00000353479 AXLP30530 894 aa15.55■□□□□ 0.08
COL17A1-201ENST00000353479 COILP38432 576 aaPredicted RBP15.55■□□□□ 0.08
COL17A1-201ENST00000353479 EFEMP1Q12805 493 aa15.55■□□□□ 0.08
COL17A1-201ENST00000353479 MTHFD1LQ6UB35 978 aa15.55■□□□□ 0.08
COL17A1-201ENST00000353479 REXO1L1PQ8IX06 675 aa15.55■□□□□ 0.08
COL17A1-201ENST00000353479 CCDC33Q8N5R6 958 aa15.55■□□□□ 0.08
COL17A1-201ENST00000353479 MRPS31Q92665 395 aaKnown RBP15.55■□□□□ 0.08
COL17A1-201ENST00000353479 SYT15Q9BQS2 421 aa15.55■□□□□ 0.08
COL17A1-201ENST00000353479 ASB7Q9H672 318 aa15.55■□□□□ 0.08
COL17A1-201ENST00000353479 LRRIQ3A6PVS8 624 aaPredicted RBP15.55■□□□□ 0.08
COL17A1-201ENST00000353479 DIAPH2O60879 1101 aa15.55■□□□□ 0.08
COL17A1-201ENST00000353479 SMIM24O75264 130 aa15.55■□□□□ 0.08
COL17A1-201ENST00000353479 CKMP06732 381 aa15.55■□□□□ 0.08
COL17A1-201ENST00000353479 BST2Q10589 180 aaKnown RBP15.55■□□□□ 0.08
COL17A1-201ENST00000353479 COL9A3Q14050 684 aaPredicted RBP15.55■□□□□ 0.08
COL17A1-201ENST00000353479 TMC7Q7Z402 723 aa15.55■□□□□ 0.08
COL17A1-201ENST00000353479 BRSK2Q8IWQ3 736 aa15.55■□□□□ 0.08
COL17A1-201ENST00000353479 ARHGAP20Q9P2F6 1191 aa15.55■□□□□ 0.08
COL17A1-201ENST00000353479 BARX2Q9UMQ3 279 aaPredicted RBP15.55■□□□□ 0.08
COL17A1-201ENST00000353479 SLC30A1Q9Y6M5 507 aa15.55■□□□□ 0.08
COL17A1-201ENST00000353479 EGFRP00533 1210 aa15.55■□□□□ 0.08
COL17A1-201ENST00000353479 AKT1P31749 480 aa15.55■□□□□ 0.08
COL17A1-201ENST00000353479 NUMBP49757 651 aa15.55■□□□□ 0.08
COL17A1-201ENST00000353479 ARHGEF7Q14155 803 aa15.55■□□□□ 0.08
COL17A1-201ENST00000353479 AGR3Q8TD06 166 aa15.55■□□□□ 0.08
COL17A1-201ENST00000353479 CARD9Q9H257 536 aa15.55■□□□□ 0.08
COL17A1-201ENST00000353479 TRABDQ9H4I3 376 aa15.55■□□□□ 0.08
COL17A1-201ENST00000353479 OSGEPQ9NPF4 335 aa15.55■□□□□ 0.08
COL17A1-201ENST00000353479 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.54■□□□□ 0.08
COL17A1-201ENST00000353479 ATP9AO75110 1047 aa15.54■□□□□ 0.08
COL17A1-201ENST00000353479 TKTL1P51854 596 aa15.54■□□□□ 0.08
COL17A1-201ENST00000353479 ZNF177Q13360 481 aaPredicted RBP15.54■□□□□ 0.08
COL17A1-201ENST00000353479 RBBP7Q16576 425 aa15.54■□□□□ 0.08
COL17A1-201ENST00000353479 GJC2Q5T442 439 aaPredicted RBP15.54■□□□□ 0.08
COL17A1-201ENST00000353479 SLC35C1Q96A29 364 aa15.54■□□□□ 0.08
COL17A1-201ENST00000353479 RNF19AQ9NV58 838 aa15.54■□□□□ 0.08
COL17A1-201ENST00000353479 ARHGEF38Q9NXL2 777 aa15.54■□□□□ 0.08
COL17A1-201ENST00000353479 CAPN6Q9Y6Q1 641 aa15.54■□□□□ 0.08
COL17A1-201ENST00000353479 CNTNAP2Q9UHC6 1331 aa15.54■□□□□ 0.08
COL17A1-201ENST00000353479 CLEC16AQ2KHT3 1053 aa15.54■□□□□ 0.08
COL17A1-201ENST00000353479 TRMT10CQ7L0Y3 403 aaKnown RBP15.54■□□□□ 0.08
COL17A1-201ENST00000353479 SENP6Q9GZR1 1112 aaPredicted RBP15.54■□□□□ 0.08
COL17A1-201ENST00000353479 PCDHB12Q9Y5F1 795 aa15.54■□□□□ 0.08
COL17A1-201ENST00000353479 F5H5T6 163 aa15.54■□□□□ 0.08
COL17A1-201ENST00000353479 LSM8O95777 96 aaKnown RBP15.54■□□□□ 0.08
COL17A1-201ENST00000353479 SLFN11Q7Z7L1 901 aa15.54■□□□□ 0.08
COL17A1-201ENST00000353479 FAM131BQ86XD5 332 aa15.54■□□□□ 0.08
COL17A1-201ENST00000353479 C20orf96Q9NUD7 363 aaPredicted RBP15.54■□□□□ 0.08
COL17A1-201ENST00000353479 TLR2O60603 784 aa15.54■□□□□ 0.08
COL17A1-201ENST00000353479 ITGB5P18084 799 aa15.54■□□□□ 0.08
COL17A1-201ENST00000353479 SZRD1Q7Z422 152 aa15.54■□□□□ 0.08
COL17A1-201ENST00000353479 N4BP2L2Q92802 583 aaPredicted RBP15.54■□□□□ 0.08
COL17A1-201ENST00000353479 SPDL1Q96EA4 605 aa15.54■□□□□ 0.08
COL17A1-201ENST00000353479 ERP44Q9BS26 406 aa15.54■□□□□ 0.08
COL17A1-201ENST00000353479 TRPM5Q9NZQ8 1165 aa15.54■□□□□ 0.08
COL17A1-201ENST00000353479 NRCAMQ92823 1304 aa15.53■□□□□ 0.08
COL17A1-201ENST00000353479 NDUFS3O75489 264 aa15.53■□□□□ 0.08
COL17A1-201ENST00000353479 F9P00740 461 aa15.53■□□□□ 0.08
COL17A1-201ENST00000353479 SMIM10L2AP0DMW4 78 aa15.53■□□□□ 0.08
COL17A1-201ENST00000353479 SMIM10L2BP0DMW5 78 aa15.53■□□□□ 0.08
COL17A1-201ENST00000353479 HSPA8P11142 646 aaKnown RBP15.53■□□□□ 0.08
COL17A1-201ENST00000353479 PDAP1Q13442 181 aaKnown RBP15.53■□□□□ 0.08
COL17A1-201ENST00000353479 SNCBQ16143 134 aa15.53■□□□□ 0.08
COL17A1-201ENST00000353479 FAXCQ5TGI0 409 aa15.53■□□□□ 0.08
COL17A1-201ENST00000353479 CCNI2Q6ZMN8 369 aaPredicted RBP15.53■□□□□ 0.08
COL17A1-201ENST00000353479 ABRAQ8N0Z2 381 aa15.53■□□□□ 0.08
COL17A1-201ENST00000353479 PDZD8Q8NEN9 1154 aa15.53■□□□□ 0.08
COL17A1-201ENST00000353479 ATG4AQ8WYN0 398 aa15.53■□□□□ 0.08
COL17A1-201ENST00000353479 CINPQ9BW66 212 aaPredicted RBP15.53■□□□□ 0.08
COL17A1-201ENST00000353479 Q9H521 79 aa15.53■□□□□ 0.08
COL17A1-201ENST00000353479 TSPAN16Q9UKR8 245 aa15.53■□□□□ 0.08
COL17A1-201ENST00000353479 MTSS1O43312 755 aa15.53■□□□□ 0.08
COL17A1-201ENST00000353479 FBXO21O94952 628 aa15.53■□□□□ 0.08
COL17A1-201ENST00000353479 HOXC6P09630 235 aa15.53■□□□□ 0.08
COL17A1-201ENST00000353479 GLRA2P23416 452 aa15.53■□□□□ 0.08
COL17A1-201ENST00000353479 ELAVL2Q12926 359 aaKnown RBP15.53■□□□□ 0.08
COL17A1-201ENST00000353479 NOGQ13253 232 aa15.53■□□□□ 0.08
COL17A1-201ENST00000353479 NOA1Q8NC60 698 aaKnown RBP15.53■□□□□ 0.08
COL17A1-201ENST00000353479 GLIS3Q8NEA6 775 aa15.53■□□□□ 0.08
COL17A1-201ENST00000353479 ELMO2Q96JJ3 720 aa15.53■□□□□ 0.08
COL17A1-201ENST00000353479 CASP5P51878 434 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms