RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 PLEKHF1Q96S99 279 aa10.39□□□□□ -0.75
COL11A1-201ENST00000353414 AAASQ9NRG9 546 aa10.39□□□□□ -0.75
COL11A1-201ENST00000353414 DDIT4Q9NX09 232 aa10.39□□□□□ -0.75
COL11A1-201ENST00000353414 E9PBE3 544 aa10.38□□□□□ -0.75
COL11A1-201ENST00000353414 MT-CO1P00395 513 aa10.38□□□□□ -0.75
COL11A1-201ENST00000353414 KRT20P35900 424 aa10.38□□□□□ -0.75
COL11A1-201ENST00000353414 KCNJ1P48048 391 aa10.38□□□□□ -0.75
COL11A1-201ENST00000353414 RGS4P49798 205 aa10.38□□□□□ -0.75
COL11A1-201ENST00000353414 CCR4P51679 360 aa10.38□□□□□ -0.75
COL11A1-201ENST00000353414 TMEM132BQ14DG7 1078 aa10.38□□□□□ -0.75
COL11A1-201ENST00000353414 SNAP47Q5SQN1 464 aa10.38□□□□□ -0.75
COL11A1-201ENST00000353414 CLEC4GQ6UXB4 293 aa10.38□□□□□ -0.75
COL11A1-201ENST00000353414 TBC1D16Q8TBP0 767 aa10.38□□□□□ -0.75
COL11A1-201ENST00000353414 TAAR1Q96RJ0 339 aa10.38□□□□□ -0.75
COL11A1-201ENST00000353414 PKD2L2Q9NZM6 624 aa10.38□□□□□ -0.75
COL11A1-201ENST00000353414 TRMT6Q9UJA5 497 aaKnown RBP10.38□□□□□ -0.75
COL11A1-201ENST00000353414 ODC1P11926 461 aa10.38□□□□□ -0.75
COL11A1-201ENST00000353414 ACO1P21399 889 aaKnown RBP10.38□□□□□ -0.75
COL11A1-201ENST00000353414 STIP1P31948 543 aaKnown RBP10.38□□□□□ -0.75
COL11A1-201ENST00000353414 PTK7Q13308 1070 aa10.38□□□□□ -0.75
COL11A1-201ENST00000353414 CYP51A1Q16850 503 aa10.38□□□□□ -0.75
COL11A1-201ENST00000353414 KCNT1Q5JUK3 1230 aa10.38□□□□□ -0.75
COL11A1-201ENST00000353414 ARL6IP4Q66PJ3 421 aaKnown RBP10.38□□□□□ -0.75
COL11A1-201ENST00000353414 TMC2Q8TDI7 906 aa10.38□□□□□ -0.75
COL11A1-201ENST00000353414 FAM84BQ96KN1 310 aaPredicted RBP10.38□□□□□ -0.75
COL11A1-201ENST00000353414 NDEL1Q9GZM8 345 aa10.38□□□□□ -0.75
COL11A1-201ENST00000353414 CAAP1Q9H8G2 361 aa10.38□□□□□ -0.75
COL11A1-201ENST00000353414 GPR108Q9NPR9 543 aa10.38□□□□□ -0.75
COL11A1-201ENST00000353414 SATB2Q9UPW6 733 aa10.38□□□□□ -0.75
COL11A1-201ENST00000353414 DCDC2CA8MYV0 355 aa10.38□□□□□ -0.75
COL11A1-201ENST00000353414 HNRNPH2P55795 449 aaKnown RBP10.38□□□□□ -0.75
COL11A1-201ENST00000353414 VAC14Q08AM6 782 aa10.38□□□□□ -0.75
COL11A1-201ENST00000353414 SH2D3CQ8N5H7 860 aa10.38□□□□□ -0.75
COL11A1-201ENST00000353414 CELF4Q9BZC1 486 aaKnown RBP10.38□□□□□ -0.75
COL11A1-201ENST00000353414 DEFB129Q9H1M3 183 aa10.38□□□□□ -0.75
COL11A1-201ENST00000353414 TTC26A0AVF1 554 aa10.38□□□□□ -0.75
COL11A1-201ENST00000353414 PSMD12O00232 456 aaPredicted RBP10.38□□□□□ -0.75
COL11A1-201ENST00000353414 MYBL1P10243 752 aa10.38□□□□□ -0.75
COL11A1-201ENST00000353414 S100A5P33763 92 aa10.38□□□□□ -0.75
COL11A1-201ENST00000353414 SKIV2L2P42285 1042 aaKnown RBP10.38□□□□□ -0.75
COL11A1-201ENST00000353414 SOX10P56693 466 aa10.38□□□□□ -0.75
COL11A1-201ENST00000353414 NOTUMQ6P988 496 aa10.38□□□□□ -0.75
COL11A1-201ENST00000353414 RNF44Q7L0R7 432 aa10.38□□□□□ -0.75
COL11A1-201ENST00000353414 RBM23Q86U06 439 aaKnown RBP10.38□□□□□ -0.75
COL11A1-201ENST00000353414 POP1Q99575 1024 aaKnown RBP10.38□□□□□ -0.75
COL11A1-201ENST00000353414 GPRC5CQ9NQ84 441 aa10.38□□□□□ -0.75
COL11A1-201ENST00000353414 IL1RAPL1Q9NZN1 696 aa10.38□□□□□ -0.75
COL11A1-201ENST00000353414 PAIP2BQ9ULR5 123 aaKnown RBP10.38□□□□□ -0.75
COL11A1-201ENST00000353414 PTPRTO14522 1441 aa10.38□□□□□ -0.75
COL11A1-201ENST00000353414 F5H5T6 163 aa10.38□□□□□ -0.75
COL11A1-201ENST00000353414 APOA1P02647 267 aa10.38□□□□□ -0.75
COL11A1-201ENST00000353414 ACOX1Q15067 660 aa10.38□□□□□ -0.75
COL11A1-201ENST00000353414 CHI3L2Q15782 390 aa10.38□□□□□ -0.75
COL11A1-201ENST00000353414 RABGAP1LQ5R372 815 aa10.38□□□□□ -0.75
COL11A1-201ENST00000353414 KIF2BQ8N4N8 673 aa10.38□□□□□ -0.75
COL11A1-201ENST00000353414 EME1Q96AY2 570 aa10.38□□□□□ -0.75
COL11A1-201ENST00000353414 SENP6Q9GZR1 1112 aaPredicted RBP10.38□□□□□ -0.75
COL11A1-201ENST00000353414 VPS28Q9UK41 221 aa10.38□□□□□ -0.75
COL11A1-201ENST00000353414 SAMD9LQ8IVG5 1584 aa10.38□□□□□ -0.75
COL11A1-201ENST00000353414 GMNCA6NCL1 334 aa10.38□□□□□ -0.75
COL11A1-201ENST00000353414 NDUFB10O96000 172 aa10.38□□□□□ -0.75
COL11A1-201ENST00000353414 CD4P01730 458 aa10.38□□□□□ -0.75
COL11A1-201ENST00000353414 UBTFL6P0CB48 400 aaPredicted RBP10.38□□□□□ -0.75
COL11A1-201ENST00000353414 TFE3P19532 575 aaPredicted RBP10.38□□□□□ -0.75
COL11A1-201ENST00000353414 NPEPPSP55786 919 aa10.38□□□□□ -0.75
COL11A1-201ENST00000353414 SRSF11Q05519 484 aaKnown RBP10.38□□□□□ -0.75
COL11A1-201ENST00000353414 STX3Q13277 289 aa10.38□□□□□ -0.75
COL11A1-201ENST00000353414 NAA30Q147X3 362 aaPredicted RBP10.38□□□□□ -0.75
COL11A1-201ENST00000353414 MRPL40Q9NQ50 206 aaKnown RBP10.38□□□□□ -0.75
COL11A1-201ENST00000353414 EHD2Q9NZN4 543 aa10.38□□□□□ -0.75
COL11A1-201ENST00000353414 NEU2Q9Y3R4 380 aa10.38□□□□□ -0.75
COL11A1-201ENST00000353414 SHANK2Q9UPX8 1470 aa10.37□□□□□ -0.75
COL11A1-201ENST00000353414 LTFP02788 710 aa10.37□□□□□ -0.75
COL11A1-201ENST00000353414 CETPP11597 493 aa10.37□□□□□ -0.75
COL11A1-201ENST00000353414 TCEA1P23193 301 aaKnown RBP10.37□□□□□ -0.75
COL11A1-201ENST00000353414 CASP4P49662 377 aa10.37□□□□□ -0.75
COL11A1-201ENST00000353414 ZNF200P98182 395 aaPredicted RBP10.37□□□□□ -0.75
COL11A1-201ENST00000353414 ACTR5Q9H9F9 607 aaPredicted RBP10.37□□□□□ -0.75
COL11A1-201ENST00000353414 RHBDL2Q9NX52 303 aa10.37□□□□□ -0.75
COL11A1-201ENST00000353414 DIS3Q9Y2L1 958 aaKnown RBP10.37□□□□□ -0.75
COL11A1-201ENST00000353414 MAP3K4Q9Y6R4 1608 aa10.37□□□□□ -0.75
COL11A1-201ENST00000353414 CNTNAP2Q9UHC6 1331 aa10.37□□□□□ -0.75
COL11A1-201ENST00000353414 CLCN3P51790 818 aa10.37□□□□□ -0.75
COL11A1-201ENST00000353414 CTXN3Q4LDR2 81 aa10.37□□□□□ -0.75
COL11A1-201ENST00000353414 FNDC3BQ53EP0 1204 aaKnown RBP10.37□□□□□ -0.75
COL11A1-201ENST00000353414 TRPC4APQ8TEL6 797 aa10.37□□□□□ -0.75
COL11A1-201ENST00000353414 PMM1Q92871 262 aa10.37□□□□□ -0.75
COL11A1-201ENST00000353414 ZNF669Q96BR6 464 aaPredicted RBP10.37□□□□□ -0.75
COL11A1-201ENST00000353414 ARHGEF26Q96DR7 871 aa10.37□□□□□ -0.75
COL11A1-201ENST00000353414 ATG4CQ96DT6 458 aa10.37□□□□□ -0.75
COL11A1-201ENST00000353414 TPD52L3Q96J77 140 aa10.37□□□□□ -0.75
COL11A1-201ENST00000353414 PDGFDQ9GZP0 370 aaPredicted RBP10.37□□□□□ -0.75
COL11A1-201ENST00000353414 RCOR1Q9UKL0 485 aa10.37□□□□□ -0.75
COL11A1-201ENST00000353414 KIF24Q5T7B8 1368 aa10.37□□□□□ -0.75
COL11A1-201ENST00000353414 FLT1P17948 1338 aa10.37□□□□□ -0.75
COL11A1-201ENST00000353414 CYB561D2O14569 222 aa10.37□□□□□ -0.75
COL11A1-201ENST00000353414 ZNF682O95780 498 aa10.37□□□□□ -0.75
COL11A1-201ENST00000353414 HLA-DRAP01903 254 aa10.37□□□□□ -0.75
COL11A1-201ENST00000353414 CYP19A1P11511 503 aaPredicted RBP10.37□□□□□ -0.75
COL11A1-201ENST00000353414 CLK1P49759 484 aaKnown RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms