RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 TMEM247A6NEH6 219 aa11.54□□□□□ -0.56
SMARCE1-202ENST00000348513 VWA5AO00534 786 aa11.54□□□□□ -0.56
SMARCE1-202ENST00000348513 KRT37O76014 449 aa11.54□□□□□ -0.56
SMARCE1-202ENST00000348513 WFS1O76024 890 aa11.54□□□□□ -0.56
SMARCE1-202ENST00000348513 NTSR2O95665 410 aa11.54□□□□□ -0.56
SMARCE1-202ENST00000348513 ENO1P06733 434 aaKnown RBP11.54□□□□□ -0.56
SMARCE1-202ENST00000348513 PDGFRBP09619 1106 aa11.54□□□□□ -0.56
SMARCE1-202ENST00000348513 MYBP10242 640 aa11.54□□□□□ -0.56
SMARCE1-202ENST00000348513 VAV1P15498 845 aa11.54□□□□□ -0.56
SMARCE1-202ENST00000348513 ALDH5A1P51649 535 aaPredicted RBP11.54□□□□□ -0.56
SMARCE1-202ENST00000348513 ROR1Q01973 937 aa11.54□□□□□ -0.56
SMARCE1-202ENST00000348513 TRIM28Q13263 835 aaKnown RBP11.54□□□□□ -0.56
SMARCE1-202ENST00000348513 ITGA9Q13797 1035 aa11.54□□□□□ -0.56
SMARCE1-202ENST00000348513 RNF220Q5VTB9 566 aa11.54□□□□□ -0.56
SMARCE1-202ENST00000348513 POTEAQ6S8J7 498 aa11.54□□□□□ -0.56
SMARCE1-202ENST00000348513 GUF1Q8N442 669 aaKnown RBP11.54□□□□□ -0.56
SMARCE1-202ENST00000348513 RIBC1Q8N443 379 aaPredicted RBP11.54□□□□□ -0.56
SMARCE1-202ENST00000348513 BORCS5Q969J3 196 aa11.54□□□□□ -0.56
SMARCE1-202ENST00000348513 C1orf50Q9BV19 199 aa11.54□□□□□ -0.56
SMARCE1-202ENST00000348513 EPB41L4AQ9HCS5 686 aaPredicted RBP11.54□□□□□ -0.56
SMARCE1-202ENST00000348513 SUGT1Q9Y2Z0 365 aa11.54□□□□□ -0.56
SMARCE1-202ENST00000348513 PCDHGC5Q9Y5F6 944 aa11.54□□□□□ -0.56
SMARCE1-202ENST00000348513 TSPAN4O14817 238 aa11.54□□□□□ -0.56
SMARCE1-202ENST00000348513 PSMC3P17980 439 aa11.54□□□□□ -0.56
SMARCE1-202ENST00000348513 CDH6P55285 790 aa11.54□□□□□ -0.56
SMARCE1-202ENST00000348513 AGBL1Q96MI9 1066 aa11.54□□□□□ -0.56
SMARCE1-202ENST00000348513 PHF20Q9BVI0 1012 aa11.54□□□□□ -0.56
SMARCE1-202ENST00000348513 TUFT1Q9NNX1 390 aa11.54□□□□□ -0.56
SMARCE1-202ENST00000348513 MYOZ2Q9NPC6 264 aa11.54□□□□□ -0.56
SMARCE1-202ENST00000348513 METTL5Q9NRN9 209 aaKnown RBP11.54□□□□□ -0.56
SMARCE1-202ENST00000348513 SYNPO2Q9UMS6 1093 aa11.54□□□□□ -0.56
SMARCE1-202ENST00000348513 KCNH4Q9UQ05 1017 aa11.54□□□□□ -0.56
SMARCE1-202ENST00000348513 UBA6A0AVT1 1052 aaPredicted RBP11.54□□□□□ -0.56
SMARCE1-202ENST00000348513 SYNDIG1LA6NDD5 238 aa11.54□□□□□ -0.56
SMARCE1-202ENST00000348513 MAP2K7O14733 419 aa11.54□□□□□ -0.56
SMARCE1-202ENST00000348513 TNFRSF21O75509 655 aa11.54□□□□□ -0.56
SMARCE1-202ENST00000348513 RGS20O76081 388 aa11.54□□□□□ -0.56
SMARCE1-202ENST00000348513 BCL10O95999 233 aa11.54□□□□□ -0.56
SMARCE1-202ENST00000348513 BCAR1P56945 870 aa11.54□□□□□ -0.56
SMARCE1-202ENST00000348513 MTF1Q14872 753 aa11.54□□□□□ -0.56
SMARCE1-202ENST00000348513 CCDC149Q6ZUS6 474 aa11.54□□□□□ -0.56
SMARCE1-202ENST00000348513 CCNYL1Q8N7R7 359 aa11.54□□□□□ -0.56
SMARCE1-202ENST00000348513 ZNF184Q99676 751 aaPredicted RBP11.54□□□□□ -0.56
SMARCE1-202ENST00000348513 CLEC4MQ9H2X3 399 aaPredicted RBP11.54□□□□□ -0.56
SMARCE1-202ENST00000348513 PCDH18Q9HCL0 1135 aa11.54□□□□□ -0.56
SMARCE1-202ENST00000348513 DIS3Q9Y2L1 958 aaKnown RBP11.54□□□□□ -0.56
SMARCE1-202ENST00000348513 SNX9Q9Y5X1 595 aa11.54□□□□□ -0.56
SMARCE1-202ENST00000348513 SNAPC2Q13487 334 aa11.54□□□□□ -0.56
SMARCE1-202ENST00000348513 ZC2HC1CQ53FD0 456 aaPredicted RBP11.54□□□□□ -0.56
SMARCE1-202ENST00000348513 LRRC71Q8N4P6 559 aa11.54□□□□□ -0.56
SMARCE1-202ENST00000348513 TTC13Q8NBP0 860 aa11.54□□□□□ -0.56
SMARCE1-202ENST00000348513 ASIC4Q96FT7 647 aa11.54□□□□□ -0.56
SMARCE1-202ENST00000348513 ZDHHC9Q9Y397 364 aa11.54□□□□□ -0.56
SMARCE1-202ENST00000348513 E5RI56 91 aa11.54□□□□□ -0.56
SMARCE1-202ENST00000348513 NFIBO00712 420 aa11.54□□□□□ -0.56
SMARCE1-202ENST00000348513 OPLAHO14841 1288 aa11.54□□□□□ -0.56
SMARCE1-202ENST00000348513 RAB15P59190 212 aa11.54□□□□□ -0.56
SMARCE1-202ENST00000348513 PDIA2Q13087 525 aaKnown RBP11.54□□□□□ -0.56
SMARCE1-202ENST00000348513 TTC33Q6PID6 262 aaPredicted RBP11.54□□□□□ -0.56
SMARCE1-202ENST00000348513 ZBED8Q8IZ13 594 aa11.54□□□□□ -0.56
SMARCE1-202ENST00000348513 SNX19Q92543 992 aa11.54□□□□□ -0.56
SMARCE1-202ENST00000348513 SLC13A1Q9BZW2 595 aa11.54□□□□□ -0.56
SMARCE1-202ENST00000348513 RXFP1Q9HBX9 757 aa11.54□□□□□ -0.56
SMARCE1-202ENST00000348513 IARS2Q9NSE4 1012 aaKnown RBP11.54□□□□□ -0.56
SMARCE1-202ENST00000348513 DMTF1Q9Y222 760 aa11.54□□□□□ -0.56
SMARCE1-202ENST00000348513 USP31Q70CQ4 1352 aa11.53□□□□□ -0.56
SMARCE1-202ENST00000348513 ITIH6Q6UXX5 1313 aa11.53□□□□□ -0.56
SMARCE1-202ENST00000348513 SP100P23497 879 aaPredicted RBP11.53□□□□□ -0.56
SMARCE1-202ENST00000348513 SULT1E1P49888 294 aa11.53□□□□□ -0.56
SMARCE1-202ENST00000348513 ORC2Q13416 577 aaPredicted RBP11.53□□□□□ -0.56
SMARCE1-202ENST00000348513 EZH2Q15910 746 aaKnown RBP11.53□□□□□ -0.56
SMARCE1-202ENST00000348513 SPATA2LQ8IUW3 424 aaPredicted RBP11.53□□□□□ -0.56
SMARCE1-202ENST00000348513 REXO1L1PQ8IX06 675 aa11.53□□□□□ -0.56
SMARCE1-202ENST00000348513 DPF2Q92785 391 aa11.53□□□□□ -0.56
SMARCE1-202ENST00000348513 ADNPQ9H2P0 1102 aa11.53□□□□□ -0.56
SMARCE1-202ENST00000348513 PREBQ9HCU5 417 aa11.53□□□□□ -0.56
SMARCE1-202ENST00000348513 UBOX5O94941 541 aa11.53□□□□□ -0.56
SMARCE1-202ENST00000348513 RASA1P20936 1047 aa11.53□□□□□ -0.56
SMARCE1-202ENST00000348513 NNMTP40261 264 aa11.53□□□□□ -0.56
SMARCE1-202ENST00000348513 MKRN4PQ13434 485 aaPredicted RBP11.53□□□□□ -0.56
SMARCE1-202ENST00000348513 ACMSDQ8TDX5 336 aa11.53□□□□□ -0.56
SMARCE1-202ENST00000348513 PRCCQ92733 491 aaPredicted RBP11.53□□□□□ -0.56
SMARCE1-202ENST00000348513 NCLNQ969V3 563 aa11.53□□□□□ -0.56
SMARCE1-202ENST00000348513 CITED4Q96RK1 184 aa11.53□□□□□ -0.56
SMARCE1-202ENST00000348513 ADAM33Q9BZ11 813 aa11.53□□□□□ -0.56
SMARCE1-202ENST00000348513 CCDC78A2IDD5 438 aa11.53□□□□□ -0.56
SMARCE1-202ENST00000348513 PRR23D1E9PI22 279 aaPredicted RBP11.53□□□□□ -0.56
SMARCE1-202ENST00000348513 BTN3A3O00478 584 aa11.53□□□□□ -0.56
SMARCE1-202ENST00000348513 ATP9BO43861 1147 aa11.53□□□□□ -0.56
SMARCE1-202ENST00000348513 LZTS3O60299 673 aaPredicted RBP11.53□□□□□ -0.56
SMARCE1-202ENST00000348513 ASS1P00966 412 aaKnown RBP11.53□□□□□ -0.56
SMARCE1-202ENST00000348513 PRR23D2P0DMB1 279 aaPredicted RBP11.53□□□□□ -0.56
SMARCE1-202ENST00000348513 ETS2P15036 469 aa11.53□□□□□ -0.56
SMARCE1-202ENST00000348513 PRAMEP78395 509 aa11.53□□□□□ -0.56
SMARCE1-202ENST00000348513 C16orf86Q6ZW13 317 aa11.53□□□□□ -0.56
SMARCE1-202ENST00000348513 TRIM59Q8IWR1 403 aa11.53□□□□□ -0.56
SMARCE1-202ENST00000348513 FAXDC2Q96IV6 333 aa11.53□□□□□ -0.56
SMARCE1-202ENST00000348513 AGPAT1Q99943 283 aa11.53□□□□□ -0.56
SMARCE1-202ENST00000348513 TMBIM4Q9HC24 238 aa11.53□□□□□ -0.56
SMARCE1-202ENST00000348513 CYP26B1Q9NR63 512 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms