RNA–Protein interactions for RNA: ENST00000347662.8

TRAF3-201, Transcript of TNF receptor associated factor 3, humanhuman

TSL 5 BASIC

Gene TRAF3, Length 7,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-201ENST00000347662 HLA-DQA2P01906 255 aa12.27□□□□□ -0.44
TRAF3-201ENST00000347662 SFNP31947 248 aa12.27□□□□□ -0.44
TRAF3-201ENST00000347662 C11orf57Q6ZUT1 292 aaPredicted RBP12.27□□□□□ -0.44
TRAF3-201ENST00000347662 IP6K2Q9UHH9 426 aa12.27□□□□□ -0.44
TRAF3-201ENST00000347662 SNX8Q9Y5X2 465 aa12.27□□□□□ -0.44
TRAF3-201ENST00000347662 AIM2O14862 343 aa12.27□□□□□ -0.45
TRAF3-201ENST00000347662 TRAPPC3O43617 180 aa12.27□□□□□ -0.45
TRAF3-201ENST00000347662 PSMA4P25789 261 aaKnown RBP12.27□□□□□ -0.45
TRAF3-201ENST00000347662 TALDO1P37837 337 aa12.27□□□□□ -0.45
TRAF3-201ENST00000347662 NLRP11P59045 1033 aaKnown RBP12.27□□□□□ -0.45
TRAF3-201ENST00000347662 ETF1P62495 437 aaKnown RBP12.27□□□□□ -0.45
TRAF3-201ENST00000347662 MTFR1Q15390 333 aa12.27□□□□□ -0.45
TRAF3-201ENST00000347662 ATAD3BQ5T9A4 648 aa12.27□□□□□ -0.45
TRAF3-201ENST00000347662 CDH24Q86UP0 819 aa12.27□□□□□ -0.45
TRAF3-201ENST00000347662 LPAR1Q92633 364 aa12.27□□□□□ -0.45
TRAF3-201ENST00000347662 TMEM143Q96AN5 459 aa12.27□□□□□ -0.45
TRAF3-201ENST00000347662 TASP1Q9H6P5 420 aa12.27□□□□□ -0.45
TRAF3-201ENST00000347662 CDYLQ9Y232 598 aa12.27□□□□□ -0.45
TRAF3-201ENST00000347662 CAND2O75155 1236 aa12.27□□□□□ -0.45
TRAF3-201ENST00000347662 CCNE1P24864 410 aa12.27□□□□□ -0.45
TRAF3-201ENST00000347662 ANXA11P50995 505 aaKnown RBP12.27□□□□□ -0.45
TRAF3-201ENST00000347662 SCNN1BP51168 640 aa12.27□□□□□ -0.45
TRAF3-201ENST00000347662 RHAGQ02094 409 aa12.27□□□□□ -0.45
TRAF3-201ENST00000347662 CYLC2Q14093 348 aaPredicted RBP12.27□□□□□ -0.45
TRAF3-201ENST00000347662 ARMCX4Q5H9R4 360 aa12.27□□□□□ -0.45
TRAF3-201ENST00000347662 INTS5Q6P9B9 1019 aaKnown RBP12.27□□□□□ -0.45
TRAF3-201ENST00000347662 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.27□□□□□ -0.45
TRAF3-201ENST00000347662 GATAD2AQ86YP4 633 aa12.27□□□□□ -0.45
TRAF3-201ENST00000347662 RHOT2Q8IXI1 618 aa12.27□□□□□ -0.45
TRAF3-201ENST00000347662 XXYLT1Q8NBI6 393 aa12.27□□□□□ -0.45
TRAF3-201ENST00000347662 TRIM63Q969Q1 353 aa12.27□□□□□ -0.45
TRAF3-201ENST00000347662 C18orf25Q96B23 403 aaPredicted RBP12.27□□□□□ -0.45
TRAF3-201ENST00000347662 TSPAN17Q96FV3 270 aa12.27□□□□□ -0.45
TRAF3-201ENST00000347662 C11orf70Q9BRQ4 267 aa12.27□□□□□ -0.45
TRAF3-201ENST00000347662 NMRK2Q9NPI5 230 aa12.27□□□□□ -0.45
TRAF3-201ENST00000347662 TRPC4Q9UBN4 977 aa12.27□□□□□ -0.45
TRAF3-201ENST00000347662 CD163L1Q9NR16 1453 aa12.27□□□□□ -0.45
TRAF3-201ENST00000347662 RBMXL2O75526 392 aaKnown RBP12.27□□□□□ -0.45
TRAF3-201ENST00000347662 EIF2S3P41091 472 aaKnown RBP12.27□□□□□ -0.45
TRAF3-201ENST00000347662 OSGEPL1Q9H4B0 414 aa12.27□□□□□ -0.45
TRAF3-201ENST00000347662 RCOR1Q9UKL0 485 aa12.27□□□□□ -0.45
TRAF3-201ENST00000347662 LRG1P02750 347 aa12.26□□□□□ -0.45
TRAF3-201ENST00000347662 ACTR2P61160 394 aa12.26□□□□□ -0.45
TRAF3-201ENST00000347662 KLC1Q07866 573 aa12.26□□□□□ -0.45
TRAF3-201ENST00000347662 SRBD1Q8N5C6 995 aaKnown RBP12.26□□□□□ -0.45
TRAF3-201ENST00000347662 PRMT6Q96LA8 375 aaPredicted RBP12.26□□□□□ -0.45
TRAF3-201ENST00000347662 ADAM30Q9UKF2 790 aa12.26□□□□□ -0.45
TRAF3-201ENST00000347662 KLHL20Q9Y2M5 609 aa12.26□□□□□ -0.45
TRAF3-201ENST00000347662 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.26□□□□□ -0.45
TRAF3-201ENST00000347662 ITIH6Q6UXX5 1313 aa12.26□□□□□ -0.45
TRAF3-201ENST00000347662 HEATR9A2RTY3 570 aa12.26□□□□□ -0.45
TRAF3-201ENST00000347662 PRODHO43272 600 aa12.26□□□□□ -0.45
TRAF3-201ENST00000347662 AP1S2P56377 157 aa12.26□□□□□ -0.45
TRAF3-201ENST00000347662 ACTN3Q08043 901 aaPredicted RBP12.26□□□□□ -0.45
TRAF3-201ENST00000347662 ALCAMQ13740 583 aa12.26□□□□□ -0.45
TRAF3-201ENST00000347662 NDUFA5Q16718 116 aa12.26□□□□□ -0.45
TRAF3-201ENST00000347662 PCYOX1LQ8NBM8 494 aa12.26□□□□□ -0.45
TRAF3-201ENST00000347662 FBXO28Q9NVF7 368 aa12.26□□□□□ -0.45
TRAF3-201ENST00000347662 C3orf70A6NLC5 250 aaPredicted RBP12.26□□□□□ -0.45
TRAF3-201ENST00000347662 ANKRD65E5RJM6 399 aa12.26□□□□□ -0.45
TRAF3-201ENST00000347662 FDX1P10109 184 aa12.26□□□□□ -0.45
TRAF3-201ENST00000347662 MCCD1P59942 119 aaPredicted RBP12.26□□□□□ -0.45
TRAF3-201ENST00000347662 RESTQ13127 1097 aa12.26□□□□□ -0.45
TRAF3-201ENST00000347662 USP10Q14694 798 aaKnown RBP12.26□□□□□ -0.45
TRAF3-201ENST00000347662 PEG10Q86TG7 708 aaKnown RBP12.26□□□□□ -0.45
TRAF3-201ENST00000347662 CFAP99D6REC4 459 aa12.26□□□□□ -0.45
TRAF3-201ENST00000347662 PARNO95453 639 aaKnown RBP12.26□□□□□ -0.45
TRAF3-201ENST00000347662 VCLP18206 1134 aa12.26□□□□□ -0.45
TRAF3-201ENST00000347662 DSG3P32926 999 aa12.26□□□□□ -0.45
TRAF3-201ENST00000347662 ATN1P54259 1190 aaPredicted RBP12.26□□□□□ -0.45
TRAF3-201ENST00000347662 FANCEQ9HB96 536 aa12.26□□□□□ -0.45
TRAF3-201ENST00000347662 ENTPD7Q9NQZ7 604 aa12.26□□□□□ -0.45
TRAF3-201ENST00000347662 DNAJC12Q9UKB3 198 aa12.26□□□□□ -0.45
TRAF3-201ENST00000347662 NUMBP49757 651 aa12.26□□□□□ -0.45
TRAF3-201ENST00000347662 HNMTP50135 292 aa12.26□□□□□ -0.45
TRAF3-201ENST00000347662 HIRAP54198 1017 aaPredicted RBP12.26□□□□□ -0.45
TRAF3-201ENST00000347662 GPC5P78333 572 aa12.26□□□□□ -0.45
TRAF3-201ENST00000347662 ELL3Q9HB65 397 aaPredicted RBP12.26□□□□□ -0.45
TRAF3-201ENST00000347662 USP1O94782 785 aa12.26□□□□□ -0.45
TRAF3-201ENST00000347662 MYL2P10916 166 aa12.26□□□□□ -0.45
TRAF3-201ENST00000347662 LMBRD2Q68DH5 695 aaPredicted RBP12.26□□□□□ -0.45
TRAF3-201ENST00000347662 NDST4Q9H3R1 872 aa12.26□□□□□ -0.45
TRAF3-201ENST00000347662 CNTNAP4Q9C0A0 1308 aa12.26□□□□□ -0.45
TRAF3-201ENST00000347662 UNC13BO14795 1591 aa12.26□□□□□ -0.45
TRAF3-201ENST00000347662 TRIM49BA6NDI0 452 aa12.25□□□□□ -0.45
TRAF3-201ENST00000347662 SAC3D1A6NKF1 404 aa12.25□□□□□ -0.45
TRAF3-201ENST00000347662 CLTBP09497 229 aa12.25□□□□□ -0.45
TRAF3-201ENST00000347662 ITGADQ13349 1161 aa12.25□□□□□ -0.45
TRAF3-201ENST00000347662 LRRC74BQ6ZQY2 392 aa12.25□□□□□ -0.45
TRAF3-201ENST00000347662 CNDP1Q96KN2 507 aa12.25□□□□□ -0.45
TRAF3-201ENST00000347662 ADAM33Q9BZ11 813 aa12.25□□□□□ -0.45
TRAF3-201ENST00000347662 C2orf40Q9H1Z8 148 aa12.25□□□□□ -0.45
TRAF3-201ENST00000347662 ETNK1Q9HBU6 452 aa12.25□□□□□ -0.45
TRAF3-201ENST00000347662 TMCC3Q9ULS5 477 aa12.25□□□□□ -0.45
TRAF3-201ENST00000347662 VEGFAP15692 232 aaPredicted RBP12.25□□□□□ -0.45
TRAF3-201ENST00000347662 GRK3P35626 688 aa12.25□□□□□ -0.45
TRAF3-201ENST00000347662 KCNK10P57789 538 aa12.25□□□□□ -0.45
TRAF3-201ENST00000347662 ZNF211Q13398 564 aaPredicted RBP12.25□□□□□ -0.45
TRAF3-201ENST00000347662 CYP51A1Q16850 503 aa12.25□□□□□ -0.45
TRAF3-201ENST00000347662 THUMPD3Q9BV44 507 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms