RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 NIF3L1Q9GZT8 377 aa15.41■□□□□ 0.06
NUP50-201ENST00000347635 ZFATQ9P243 1243 aa15.41■□□□□ 0.06
NUP50-201ENST00000347635 GRIN2DO15399 1336 aa15.41■□□□□ 0.06
NUP50-201ENST00000347635 GARTP22102 1010 aa15.41■□□□□ 0.06
NUP50-201ENST00000347635 TYK2P29597 1187 aa15.41■□□□□ 0.06
NUP50-201ENST00000347635 MCL1Q07820 350 aa15.41■□□□□ 0.06
NUP50-201ENST00000347635 ARSHQ5FYA8 562 aa15.41■□□□□ 0.06
NUP50-201ENST00000347635 SPOCD1Q6ZMY3 1216 aa15.41■□□□□ 0.06
NUP50-201ENST00000347635 PRPF39Q86UA1 669 aaKnown RBP15.41■□□□□ 0.06
NUP50-201ENST00000347635 CKAP2Q8WWK9 683 aa15.41■□□□□ 0.06
NUP50-201ENST00000347635 DHX35Q9H5Z1 703 aaKnown RBP15.41■□□□□ 0.06
NUP50-201ENST00000347635 RBP3P10745 1247 aa15.41■□□□□ 0.06
NUP50-201ENST00000347635 MMP13P45452 471 aa15.41■□□□□ 0.06
NUP50-201ENST00000347635 CRELD2Q6UXH1 353 aaPredicted RBP15.41■□□□□ 0.06
NUP50-201ENST00000347635 TRIML2Q8N7C3 387 aa15.41■□□□□ 0.06
NUP50-201ENST00000347635 MYLK2Q9H1R3 596 aa15.41■□□□□ 0.06
NUP50-201ENST00000347635 CHST7Q9NS84 486 aa15.41■□□□□ 0.06
NUP50-201ENST00000347635 MEIS2O14770 477 aa15.4■□□□□ 0.06
NUP50-201ENST00000347635 CPA2P48052 419 aa15.4■□□□□ 0.06
NUP50-201ENST00000347635 DLG4P78352 724 aa15.4■□□□□ 0.06
NUP50-201ENST00000347635 ZCWPW2Q504Y3 356 aa15.4■□□□□ 0.06
NUP50-201ENST00000347635 SV2AQ7L0J3 742 aa15.4■□□□□ 0.06
NUP50-201ENST00000347635 PGBD4Q96DM1 585 aa15.4■□□□□ 0.06
NUP50-201ENST00000347635 NEUROG2Q9H2A3 272 aa15.4■□□□□ 0.06
NUP50-201ENST00000347635 FAM198AQ9UFP1 575 aa15.4■□□□□ 0.06
NUP50-201ENST00000347635 TGFB3P10600 412 aa15.4■□□□□ 0.06
NUP50-201ENST00000347635 PRMT7Q9NVM4 692 aaPredicted RBP15.4■□□□□ 0.06
NUP50-201ENST00000347635 OATP04181 439 aa15.4■□□□□ 0.06
NUP50-201ENST00000347635 C6orf222P0C671 652 aaPredicted RBP15.4■□□□□ 0.06
NUP50-201ENST00000347635 SERPINB4P48594 390 aa15.4■□□□□ 0.06
NUP50-201ENST00000347635 MTFR1Q15390 333 aa15.4■□□□□ 0.06
NUP50-201ENST00000347635 KCTD19Q17RG1 926 aaPredicted RBP15.4■□□□□ 0.06
NUP50-201ENST00000347635 LRRC57Q8N9N7 239 aa15.4■□□□□ 0.06
NUP50-201ENST00000347635 EPS8L1Q8TE68 723 aa15.4■□□□□ 0.06
NUP50-201ENST00000347635 SCAF8Q9UPN6 1271 aaKnown RBP15.4■□□□□ 0.06
NUP50-201ENST00000347635 KCPQ6ZWJ8 1503 aa15.4■□□□□ 0.06
NUP50-201ENST00000347635 TM9SF1O15321 606 aa15.4■□□□□ 0.06
NUP50-201ENST00000347635 KPNA6O60684 536 aa15.4■□□□□ 0.06
NUP50-201ENST00000347635 PDGFRAP16234 1089 aa15.4■□□□□ 0.06
NUP50-201ENST00000347635 INHBEP58166 350 aa15.4■□□□□ 0.06
NUP50-201ENST00000347635 FKBP1BP68106 108 aa15.4■□□□□ 0.06
NUP50-201ENST00000347635 TSPY1Q01534 308 aa15.4■□□□□ 0.06
NUP50-201ENST00000347635 CHI3L2Q15782 390 aa15.4■□□□□ 0.06
NUP50-201ENST00000347635 WASHC2DQ5SRD0 308 aa15.4■□□□□ 0.06
NUP50-201ENST00000347635 PRCCQ92733 491 aaPredicted RBP15.4■□□□□ 0.06
NUP50-201ENST00000347635 TMEM121Q9BTD3 319 aa15.4■□□□□ 0.06
NUP50-201ENST00000347635 TMEM106CQ9BVX2 250 aa15.4■□□□□ 0.06
NUP50-201ENST00000347635 AGO4Q9HCK5 861 aaKnown RBP15.4■□□□□ 0.06
NUP50-201ENST00000347635 PFDN4Q9NQP4 134 aa15.4■□□□□ 0.06
NUP50-201ENST00000347635 DDX3YO15523 660 aaKnown RBP15.4■□□□□ 0.06
NUP50-201ENST00000347635 CYP1A2P05177 515 aa15.4■□□□□ 0.06
NUP50-201ENST00000347635 MARCKSL1P49006 195 aa15.4■□□□□ 0.06
NUP50-201ENST00000347635 AP1B1Q10567 949 aa15.4■□□□□ 0.06
NUP50-201ENST00000347635 MED21Q13503 144 aa15.4■□□□□ 0.06
NUP50-201ENST00000347635 TBCCQ15814 346 aa15.4■□□□□ 0.06
NUP50-201ENST00000347635 ZNF484Q5JVG2 852 aa15.4■□□□□ 0.06
NUP50-201ENST00000347635 C4orf19Q8IY42 314 aa15.4■□□□□ 0.06
NUP50-201ENST00000347635 ETNPPLQ8TBG4 499 aa15.4■□□□□ 0.06
NUP50-201ENST00000347635 ZNF668Q96K58 619 aaPredicted RBP15.4■□□□□ 0.06
NUP50-201ENST00000347635 SPATC1LQ9H0A9 340 aa15.4■□□□□ 0.06
NUP50-201ENST00000347635 METTL5Q9NRN9 209 aaKnown RBP15.4■□□□□ 0.06
NUP50-201ENST00000347635 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.4■□□□□ 0.06
NUP50-201ENST00000347635 DNALI1O14645 258 aaPredicted RBP15.39■□□□□ 0.05
NUP50-201ENST00000347635 SPATA31C1P0DKV0 1188 aa15.39■□□□□ 0.05
NUP50-201ENST00000347635 PPIL2Q13356 520 aa15.39■□□□□ 0.05
NUP50-201ENST00000347635 JADE1Q6IE81 842 aa15.39■□□□□ 0.05
NUP50-201ENST00000347635 PIK3R2O00459 728 aa15.39■□□□□ 0.05
NUP50-201ENST00000347635 CALB2P22676 271 aa15.39■□□□□ 0.05
NUP50-201ENST00000347635 RAB44Q7Z6P3 723 aaPredicted RBP15.39■□□□□ 0.05
NUP50-201ENST00000347635 RNF168Q8IYW5 571 aaPredicted RBP15.39■□□□□ 0.05
NUP50-201ENST00000347635 CERS5Q8N5B7 392 aa15.39■□□□□ 0.05
NUP50-201ENST00000347635 CDCA5Q96FF9 252 aa15.39■□□□□ 0.05
NUP50-201ENST00000347635 TMEM237Q96Q45 408 aa15.39■□□□□ 0.05
NUP50-201ENST00000347635 DUOX1Q9NRD9 1551 aa15.39■□□□□ 0.05
NUP50-201ENST00000347635 TRIM49D1C9J1S8 452 aa15.39■□□□□ 0.05
NUP50-201ENST00000347635 KLHL2O95198 593 aa15.39■□□□□ 0.05
NUP50-201ENST00000347635 UBTFL6P0CB48 400 aaPredicted RBP15.39■□□□□ 0.05
NUP50-201ENST00000347635 GABPAQ06546 454 aa15.39■□□□□ 0.05
NUP50-201ENST00000347635 PPP3CAQ08209 521 aa15.39■□□□□ 0.05
NUP50-201ENST00000347635 BIRC2Q13490 618 aa15.39■□□□□ 0.05
NUP50-201ENST00000347635 ASTE1Q2TB18 679 aaPredicted RBP15.39■□□□□ 0.05
NUP50-201ENST00000347635 RABGAP1LQ5R372 815 aa15.39■□□□□ 0.05
NUP50-201ENST00000347635 RARS2Q5T160 578 aaKnown RBP15.39■□□□□ 0.05
NUP50-201ENST00000347635 AGAP11Q8TF27 550 aa15.39■□□□□ 0.05
NUP50-201ENST00000347635 KIF9Q9HAQ2 790 aa15.39■□□□□ 0.05
NUP50-201ENST00000347635 AVENQ9NQS1 362 aaPredicted RBP15.39■□□□□ 0.05
NUP50-201ENST00000347635 MAGEA13PA6NCF6 341 aa15.39■□□□□ 0.05
NUP50-201ENST00000347635 RARRES1P49788 294 aa15.39■□□□□ 0.05
NUP50-201ENST00000347635 ACTR2P61160 394 aa15.39■□□□□ 0.05
NUP50-201ENST00000347635 SMAD1Q15797 465 aaKnown RBP15.39■□□□□ 0.05
NUP50-201ENST00000347635 ARL13BQ3SXY8 428 aa15.39■□□□□ 0.05
NUP50-201ENST00000347635 KAT2BQ92831 832 aa15.39■□□□□ 0.05
NUP50-201ENST00000347635 SUDS3Q9H7L9 328 aaPredicted RBP15.39■□□□□ 0.05
NUP50-201ENST00000347635 PXMP2Q9NR77 195 aa15.39■□□□□ 0.05
NUP50-201ENST00000347635 RGPD2P0DJD1 1756 aa15.38■□□□□ 0.05
NUP50-201ENST00000347635 VWA5AO00534 786 aa15.38■□□□□ 0.05
NUP50-201ENST00000347635 IL18RAPO95256 599 aa15.38■□□□□ 0.05
NUP50-201ENST00000347635 GCNT1Q02742 428 aa15.38■□□□□ 0.05
NUP50-201ENST00000347635 RNF180Q86T96 592 aa15.38■□□□□ 0.05
NUP50-201ENST00000347635 RNF139Q8WU17 664 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms