RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 DEFB128Q7Z7B8 93 aa11.61□□□□□ -0.55
ECM1-201ENST00000346569 XYLT1Q86Y38 959 aa11.61□□□□□ -0.55
ECM1-201ENST00000346569 NPAS4Q8IUM7 802 aa11.61□□□□□ -0.55
ECM1-201ENST00000346569 CEP112Q8N8E3 955 aa11.61□□□□□ -0.55
ECM1-201ENST00000346569 C3orf20Q8ND61 904 aa11.61□□□□□ -0.55
ECM1-201ENST00000346569 PBKQ96KB5 322 aa11.61□□□□□ -0.55
ECM1-201ENST00000346569 RTP3Q9BQQ7 232 aa11.61□□□□□ -0.55
ECM1-201ENST00000346569 DNAI2Q9GZS0 605 aa11.61□□□□□ -0.55
ECM1-201ENST00000346569 FAM49BQ9NUQ9 324 aa11.61□□□□□ -0.55
ECM1-201ENST00000346569 RNF216Q9NWF9 866 aaPredicted RBP11.61□□□□□ -0.55
ECM1-201ENST00000346569 DDX43Q9NXZ2 648 aaKnown RBP11.61□□□□□ -0.55
ECM1-201ENST00000346569 WDR35Q9P2L0 1181 aa11.61□□□□□ -0.55
ECM1-201ENST00000346569 RNF14Q9UBS8 474 aa11.61□□□□□ -0.55
ECM1-201ENST00000346569 STRIP2Q9ULQ0 834 aa11.61□□□□□ -0.55
ECM1-201ENST00000346569 SCINQ9Y6U3 715 aa11.61□□□□□ -0.55
ECM1-201ENST00000346569 SCN5AQ14524 2016 aa11.61□□□□□ -0.55
ECM1-201ENST00000346569 F8W810 466 aa11.6□□□□□ -0.55
ECM1-201ENST00000346569 M0QYV0 167 aa11.6□□□□□ -0.55
ECM1-201ENST00000346569 MYO1FO00160 1098 aa11.6□□□□□ -0.55
ECM1-201ENST00000346569 TULP2O00295 520 aa11.6□□□□□ -0.55
ECM1-201ENST00000346569 HOXA2O43364 376 aa11.6□□□□□ -0.55
ECM1-201ENST00000346569 TADA3O75528 432 aa11.6□□□□□ -0.55
ECM1-201ENST00000346569 PROSCO94903 275 aa11.6□□□□□ -0.55
ECM1-201ENST00000346569 ERBB2P04626 1255 aa11.6□□□□□ -0.55
ECM1-201ENST00000346569 ODC1P11926 461 aa11.6□□□□□ -0.55
ECM1-201ENST00000346569 COMTP21964 271 aa11.6□□□□□ -0.55
ECM1-201ENST00000346569 CXCR5P32302 372 aa11.6□□□□□ -0.55
ECM1-201ENST00000346569 GATMP50440 423 aa11.6□□□□□ -0.55
ECM1-201ENST00000346569 RPL7AP62424 266 aaKnown RBP11.6□□□□□ -0.55
ECM1-201ENST00000346569 PDE4CQ08493 712 aa11.6□□□□□ -0.55
ECM1-201ENST00000346569 IKBKEQ14164 716 aa11.6□□□□□ -0.55
ECM1-201ENST00000346569 GOLGA7BQ2TAP0 167 aa11.6□□□□□ -0.55
ECM1-201ENST00000346569 FAM171BQ6P995 826 aa11.6□□□□□ -0.55
ECM1-201ENST00000346569 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.6□□□□□ -0.55
ECM1-201ENST00000346569 RSRC2Q7L4I2 434 aaKnown RBP11.6□□□□□ -0.55
ECM1-201ENST00000346569 CPNE8Q86YQ8 564 aa11.6□□□□□ -0.55
ECM1-201ENST00000346569 FUKQ8N0W3 1084 aa11.6□□□□□ -0.55
ECM1-201ENST00000346569 ACBD6Q9BR61 282 aa11.6□□□□□ -0.55
ECM1-201ENST00000346569 CRTAC1Q9NQ79 661 aa11.6□□□□□ -0.55
ECM1-201ENST00000346569 HESX1Q9UBX0 185 aa11.6□□□□□ -0.55
ECM1-201ENST00000346569 DNAJB4Q9UDY4 337 aa11.6□□□□□ -0.55
ECM1-201ENST00000346569 ANAPC7Q9UJX3 599 aa11.6□□□□□ -0.55
ECM1-201ENST00000346569 DSEQ9UL01 958 aa11.6□□□□□ -0.55
ECM1-201ENST00000346569 CDH9Q9ULB4 789 aa11.6□□□□□ -0.55
ECM1-201ENST00000346569 LRFN2Q9ULH4 789 aa11.6□□□□□ -0.55
ECM1-201ENST00000346569 TDRD15B5MCY1 1934 aaKnown RBP11.6□□□□□ -0.55
ECM1-201ENST00000346569 UQCRHLA0A096LP55 91 aa11.6□□□□□ -0.55
ECM1-201ENST00000346569 MYBPHLA2RUH7 354 aa11.6□□□□□ -0.55
ECM1-201ENST00000346569 EFCAB8A8MWE9 144 aa11.6□□□□□ -0.55
ECM1-201ENST00000346569 MIF4GDA9UHW6 222 aaKnown RBP11.6□□□□□ -0.55
ECM1-201ENST00000346569 I3L4J1 428 aa11.6□□□□□ -0.55
ECM1-201ENST00000346569 NRP1O14786 923 aa11.6□□□□□ -0.55
ECM1-201ENST00000346569 GJB6O95452 261 aa11.6□□□□□ -0.55
ECM1-201ENST00000346569 ALDH2P05091 517 aa11.6□□□□□ -0.55
ECM1-201ENST00000346569 UQCRHP07919 91 aa11.6□□□□□ -0.55
ECM1-201ENST00000346569 CCDC130P13994 396 aa11.6□□□□□ -0.55
ECM1-201ENST00000346569 EN2P19622 333 aaPredicted RBP11.6□□□□□ -0.55
ECM1-201ENST00000346569 ACAT1P24752 427 aaKnown RBP11.6□□□□□ -0.55
ECM1-201ENST00000346569 CTNNA2P26232 953 aa11.6□□□□□ -0.55
ECM1-201ENST00000346569 TKTP29401 623 aaKnown RBP11.6□□□□□ -0.55
ECM1-201ENST00000346569 SLC1A1P43005 524 aa11.6□□□□□ -0.55
ECM1-201ENST00000346569 OR1G1P47890 313 aa11.6□□□□□ -0.55
ECM1-201ENST00000346569 PLCB3Q01970 1234 aa11.6□□□□□ -0.55
ECM1-201ENST00000346569 TAP1Q03518 808 aa11.6□□□□□ -0.55
ECM1-201ENST00000346569 RNASELQ05823 741 aaKnown RBP11.6□□□□□ -0.55
ECM1-201ENST00000346569 BST2Q10589 180 aaKnown RBP11.6□□□□□ -0.55
ECM1-201ENST00000346569 NAA30Q147X3 362 aaPredicted RBP11.6□□□□□ -0.55
ECM1-201ENST00000346569 PAN2Q504Q3 1202 aaKnown RBP11.6□□□□□ -0.55
ECM1-201ENST00000346569 CYP4A22Q5TCH4 519 aa11.6□□□□□ -0.55
ECM1-201ENST00000346569 PRPF38BQ5VTL8 546 aaKnown RBP11.6□□□□□ -0.55
ECM1-201ENST00000346569 MFSD5Q6N075 450 aa11.6□□□□□ -0.55
ECM1-201ENST00000346569 RASGEF1CQ8N431 466 aa11.6□□□□□ -0.55
ECM1-201ENST00000346569 SLC2A14Q8TDB8 520 aa11.6□□□□□ -0.55
ECM1-201ENST00000346569 KHSRPQ92945 711 aaKnown RBP eCLIP11.6□□□□□ -0.55
ECM1-201ENST00000346569 TOP1MTQ969P6 601 aa11.6□□□□□ -0.55
ECM1-201ENST00000346569 HSFY1Q96LI6 401 aa11.6□□□□□ -0.55
ECM1-201ENST00000346569 PSMB7Q99436 277 aa11.6□□□□□ -0.55
ECM1-201ENST00000346569 PKMYT1Q99640 499 aa11.6□□□□□ -0.55
ECM1-201ENST00000346569 SYT15Q9BQS2 421 aa11.6□□□□□ -0.55
ECM1-201ENST00000346569 DUSP16Q9BY84 665 aa11.6□□□□□ -0.55
ECM1-201ENST00000346569 B3GNT5Q9BYG0 378 aa11.6□□□□□ -0.55
ECM1-201ENST00000346569 CYLDQ9NQC7 956 aa11.6□□□□□ -0.55
ECM1-201ENST00000346569 PCDHB8Q9UN66 801 aa11.6□□□□□ -0.55
ECM1-201ENST00000346569 PCDHA3Q9Y5H8 950 aa11.6□□□□□ -0.55
ECM1-201ENST00000346569 LAMA3Q16787 3333 aa11.59□□□□□ -0.55
ECM1-201ENST00000346569 SZT2Q5T011 3432 aa11.59□□□□□ -0.55
ECM1-201ENST00000346569 ABHD14A-ACY1A0A1B0GW23 586 aa11.59□□□□□ -0.55
ECM1-201ENST00000346569 ARHGEF37A1IGU5 675 aa11.59□□□□□ -0.55
ECM1-201ENST00000346569 KCNK3O14649 394 aa11.59□□□□□ -0.55
ECM1-201ENST00000346569 DGKIO75912 1065 aa11.59□□□□□ -0.55
ECM1-201ENST00000346569 GALTP07902 379 aa11.59□□□□□ -0.55
ECM1-201ENST00000346569 PCSK1P29120 753 aa11.59□□□□□ -0.55
ECM1-201ENST00000346569 RFC1P35251 1148 aaPredicted RBP11.59□□□□□ -0.55
ECM1-201ENST00000346569 BCAT1P54687 386 aa11.59□□□□□ -0.55
ECM1-201ENST00000346569 PSMC1P62191 440 aaKnown RBP11.59□□□□□ -0.55
ECM1-201ENST00000346569 OGDHQ02218 1023 aa11.59□□□□□ -0.55
ECM1-201ENST00000346569 ITIH3Q06033 890 aa11.59□□□□□ -0.55
ECM1-201ENST00000346569 MRPL58Q14197 206 aaKnown RBP11.59□□□□□ -0.55
ECM1-201ENST00000346569 PTPROQ16827 1216 aa11.59□□□□□ -0.55
ECM1-201ENST00000346569 CCDC142Q17RM4 750 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms