RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 LZTS3O60299 673 aaPredicted RBP24.01■■□□□ 1.43
NPAS3-201ENST00000346562 RPA1P27694 616 aa24.01■■□□□ 1.43
NPAS3-201ENST00000346562 C10orf53Q8N6V4 93 aa24.01■■□□□ 1.43
NPAS3-201ENST00000346562 IGDCC4Q8TDY8 1250 aa24.01■■□□□ 1.43
NPAS3-201ENST00000346562 THAP11Q96EK4 314 aa24.01■■□□□ 1.43
NPAS3-201ENST00000346562 AIM2O14862 343 aa24.01■■□□□ 1.43
NPAS3-201ENST00000346562 CAMTA2O94983 1202 aa24.01■■□□□ 1.43
NPAS3-201ENST00000346562 MRNIPQ6NTE8 343 aa24.01■■□□□ 1.43
NPAS3-201ENST00000346562 JAMLQ86YT9 394 aa24.01■■□□□ 1.43
NPAS3-201ENST00000346562 RIN2Q8WYP3 895 aaPredicted RBP24.01■■□□□ 1.43
NPAS3-201ENST00000346562 ZCWPW1Q9H0M4 648 aa24.01■■□□□ 1.43
NPAS3-201ENST00000346562 CROCC2H7BZ55 1655 aa24.01■■□□□ 1.43
NPAS3-201ENST00000346562 PTPN7P35236 360 aa24.01■■□□□ 1.43
NPAS3-201ENST00000346562 BFSP2Q13515 415 aa24.01■■□□□ 1.43
NPAS3-201ENST00000346562 SMTNL2Q2TAL5 461 aa24.01■■□□□ 1.43
NPAS3-201ENST00000346562 C9orf72Q96LT7 481 aa24.01■■□□□ 1.43
NPAS3-201ENST00000346562 TBX20Q9UMR3 447 aa24.01■■□□□ 1.43
NPAS3-201ENST00000346562 DARSP14868 501 aaKnown RBP24.01■■□□□ 1.43
NPAS3-201ENST00000346562 DEFB129Q9H1M3 183 aa24.01■■□□□ 1.43
NPAS3-201ENST00000346562 E2F8A0AVK6 867 aa24.01■■□□□ 1.43
NPAS3-201ENST00000346562 MRPS15P82914 257 aaKnown RBP24.01■■□□□ 1.43
NPAS3-201ENST00000346562 BOLA3Q53S33 107 aa24.01■■□□□ 1.43
NPAS3-201ENST00000346562 ZNF438Q7Z4V0 828 aa24.01■■□□□ 1.43
NPAS3-201ENST00000346562 ELOA2Q8IYF1 753 aaPredicted RBP24.01■■□□□ 1.43
NPAS3-201ENST00000346562 AGBL1Q96MI9 1066 aa24.01■■□□□ 1.43
NPAS3-201ENST00000346562 EPHB2P29323 1055 aa24■■□□□ 1.43
NPAS3-201ENST00000346562 CCDC142Q17RM4 750 aa24■■□□□ 1.43
NPAS3-201ENST00000346562 DBR1Q9UK59 544 aaKnown RBP24■■□□□ 1.43
NPAS3-201ENST00000346562 DSEQ9UL01 958 aa24■■□□□ 1.43
NPAS3-201ENST00000346562 AAR2Q9Y312 384 aaKnown RBP24■■□□□ 1.43
NPAS3-201ENST00000346562 ITGA8P53708 1063 aa24■■□□□ 1.43
NPAS3-201ENST00000346562 STOX1Q6ZVD7 989 aa24■■□□□ 1.43
NPAS3-201ENST00000346562 ATG4CQ96DT6 458 aa24■■□□□ 1.43
NPAS3-201ENST00000346562 RPRD1AQ96P16 312 aaPredicted RBP24■■□□□ 1.43
NPAS3-201ENST00000346562 TMEM39BQ9GZU3 492 aa24■■□□□ 1.43
NPAS3-201ENST00000346562 ASCC2Q9H1I8 757 aaPredicted RBP24■■□□□ 1.43
NPAS3-201ENST00000346562 TMEM245Q9H330 911 aa24■■□□□ 1.43
NPAS3-201ENST00000346562 HPS4Q9NQG7 708 aa24■■□□□ 1.43
NPAS3-201ENST00000346562 PRIM2P49643 509 aa24■■□□□ 1.43
NPAS3-201ENST00000346562 AGAP9Q5VTM2 703 aa24■■□□□ 1.43
NPAS3-201ENST00000346562 FAM71DQ8N9W8 422 aa24■■□□□ 1.43
NPAS3-201ENST00000346562 L3MBTL3Q96JM7 780 aaPredicted RBP24■■□□□ 1.43
NPAS3-201ENST00000346562 STAU2Q9NUL3 570 aaKnown RBP eCLIP24■■□□□ 1.43
NPAS3-201ENST00000346562 M0QYT0 321 aa24■■□□□ 1.43
NPAS3-201ENST00000346562 WLSQ5T9L3 541 aa24■■□□□ 1.43
NPAS3-201ENST00000346562 RMND5AQ9H871 391 aa24■■□□□ 1.43
NPAS3-201ENST00000346562 RNF112Q9ULX5 631 aa24■■□□□ 1.43
NPAS3-201ENST00000346562 ACTN3Q08043 901 aaPredicted RBP23.99■■□□□ 1.43
NPAS3-201ENST00000346562 CUL2Q13617 745 aa23.99■■□□□ 1.43
NPAS3-201ENST00000346562 KBTBD12Q3ZCT8 623 aa23.99■■□□□ 1.43
NPAS3-201ENST00000346562 P3H2Q8IVL5 708 aa23.99■■□□□ 1.43
NPAS3-201ENST00000346562 ADAM33Q9BZ11 813 aa23.99■■□□□ 1.43
NPAS3-201ENST00000346562 VIPAS39Q9H9C1 493 aa23.99■■□□□ 1.43
NPAS3-201ENST00000346562 CAMK2GQ13555 558 aaPredicted RBP23.99■■□□□ 1.43
NPAS3-201ENST00000346562 LINC00116Q8NCU8 138 aa23.99■■□□□ 1.43
NPAS3-201ENST00000346562 TAAR1Q96RJ0 339 aa23.99■■□□□ 1.43
NPAS3-201ENST00000346562 CAPN10Q9HC96 672 aa23.99■■□□□ 1.43
NPAS3-201ENST00000346562 PSTPIP1O43586 416 aa23.99■■□□□ 1.43
NPAS3-201ENST00000346562 GEMIN4P57678 1058 aaKnown RBP23.99■■□□□ 1.43
NPAS3-201ENST00000346562 PLEKHH3Q7Z736 793 aa23.99■■□□□ 1.43
NPAS3-201ENST00000346562 HERC6Q8IVU3 1022 aa23.99■■□□□ 1.43
NPAS3-201ENST00000346562 FBXO32Q969P5 355 aa23.99■■□□□ 1.43
NPAS3-201ENST00000346562 VPS50Q96JG6 964 aa23.99■■□□□ 1.43
NPAS3-201ENST00000346562 NMRK2Q9NPI5 230 aa23.99■■□□□ 1.43
NPAS3-201ENST00000346562 GLI2P10070 1586 aa23.99■■□□□ 1.43
NPAS3-201ENST00000346562 AP1G2O75843 785 aa23.99■■□□□ 1.43
NPAS3-201ENST00000346562 TOMM70O94826 608 aa23.99■■□□□ 1.43
NPAS3-201ENST00000346562 MTF1Q14872 753 aa23.99■■□□□ 1.43
NPAS3-201ENST00000346562 RASGRP2Q7LDG7 609 aa23.99■■□□□ 1.43
NPAS3-201ENST00000346562 CLEC10AQ8IUN9 316 aa23.99■■□□□ 1.43
NPAS3-201ENST00000346562 E2F7Q96AV8 911 aa23.99■■□□□ 1.43
NPAS3-201ENST00000346562 PPP1R37O75864 691 aa23.99■■□□□ 1.43
NPAS3-201ENST00000346562 ICAM1P05362 532 aa23.99■■□□□ 1.43
NPAS3-201ENST00000346562 GARTP22102 1010 aa23.99■■□□□ 1.43
NPAS3-201ENST00000346562 CHI3L1P36222 383 aaPredicted RBP23.99■■□□□ 1.43
NPAS3-201ENST00000346562 OXCT1P55809 520 aa23.99■■□□□ 1.43
NPAS3-201ENST00000346562 DAB2IPQ5VWQ8 1189 aa23.99■■□□□ 1.43
NPAS3-201ENST00000346562 MANSC1Q9H8J5 431 aa23.99■■□□□ 1.43
NPAS3-201ENST00000346562 KLC4Q9NSK0 619 aa23.99■■□□□ 1.43
NPAS3-201ENST00000346562 ANKRD65E5RJM6 399 aa23.98■■□□□ 1.43
NPAS3-201ENST00000346562 SYN2Q92777 582 aaPredicted RBP23.98■■□□□ 1.43
NPAS3-201ENST00000346562 C16orf72Q14CZ0 275 aa23.98■■□□□ 1.43
NPAS3-201ENST00000346562 CLEC16AQ2KHT3 1053 aa23.98■■□□□ 1.43
NPAS3-201ENST00000346562 CARNMT1Q8N4J0 409 aa23.98■■□□□ 1.43
NPAS3-201ENST00000346562 CHST12Q9NRB3 414 aa23.98■■□□□ 1.43
NPAS3-201ENST00000346562 DDIT4Q9NX09 232 aa23.98■■□□□ 1.43
NPAS3-201ENST00000346562 USE1Q9NZ43 259 aa23.98■■□□□ 1.43
NPAS3-201ENST00000346562 URODP06132 367 aa23.98■■□□□ 1.43
NPAS3-201ENST00000346562 CSE1LP55060 971 aaKnown RBP23.98■■□□□ 1.43
NPAS3-201ENST00000346562 RPL10AP62906 217 aaKnown RBP23.98■■□□□ 1.43
NPAS3-201ENST00000346562 PRAMEF18Q5VWM3 479 aa23.98■■□□□ 1.43
NPAS3-201ENST00000346562 LVRNQ6Q4G3 990 aa23.98■■□□□ 1.43
NPAS3-201ENST00000346562 BLOC1S5Q8TDH9 187 aa23.98■■□□□ 1.43
NPAS3-201ENST00000346562 INPP5DQ92835 1189 aa23.98■■□□□ 1.43
NPAS3-201ENST00000346562 RPS6KB2Q9UBS0 482 aa23.98■■□□□ 1.43
NPAS3-201ENST00000346562 RBP3P10745 1247 aa23.98■■□□□ 1.43
NPAS3-201ENST00000346562 UNC45BQ8IWX7 931 aa23.98■■□□□ 1.43
NPAS3-201ENST00000346562 ZNF473Q8WTR7 871 aaKnown RBP23.98■■□□□ 1.43
NPAS3-201ENST00000346562 FAM205CA6NFA0 338 aa23.97■■□□□ 1.43
NPAS3-201ENST00000346562 SNTNA6NMZ2 147 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms