RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 PAAF1Q9BRP4 392 aa22.68■■□□□ 1.22
TSPAN3-202ENST00000346495 HIPK3Q9H422 1215 aa22.68■■□□□ 1.22
TSPAN3-202ENST00000346495 TJP2Q9UDY2 1190 aa22.68■■□□□ 1.22
TSPAN3-202ENST00000346495 GOLGA8SH3BPF8 625 aa22.67■■□□□ 1.22
TSPAN3-202ENST00000346495 ENPP3O14638 875 aa22.67■■□□□ 1.22
TSPAN3-202ENST00000346495 B3GAT3O94766 335 aa22.67■■□□□ 1.22
TSPAN3-202ENST00000346495 RHOXF2BP0C7M4 288 aa22.67■■□□□ 1.22
TSPAN3-202ENST00000346495 KRT3P12035 628 aa22.67■■□□□ 1.22
TSPAN3-202ENST00000346495 IGFBP6P24592 240 aaPredicted RBP22.67■■□□□ 1.22
TSPAN3-202ENST00000346495 BCAT1P54687 386 aa22.67■■□□□ 1.22
TSPAN3-202ENST00000346495 RWDD2BP57060 319 aa22.67■■□□□ 1.22
TSPAN3-202ENST00000346495 RNASE9P60153 205 aaKnown RBP22.67■■□□□ 1.22
TSPAN3-202ENST00000346495 PKN2Q16513 984 aaKnown RBP22.67■■□□□ 1.22
TSPAN3-202ENST00000346495 CLLU1OSQ5K130 101 aa22.67■■□□□ 1.22
TSPAN3-202ENST00000346495 ANKRD52Q8NB46 1076 aa22.67■■□□□ 1.22
TSPAN3-202ENST00000346495 STK32AQ8WU08 396 aa22.67■■□□□ 1.22
TSPAN3-202ENST00000346495 ARMC5Q96C12 935 aa22.67■■□□□ 1.22
TSPAN3-202ENST00000346495 MCRS1Q96EZ8 462 aa22.67■■□□□ 1.22
TSPAN3-202ENST00000346495 RNPC3Q96LT9 517 aaKnown RBP22.67■■□□□ 1.22
TSPAN3-202ENST00000346495 NAP1L3Q99457 506 aaPredicted RBP22.67■■□□□ 1.22
TSPAN3-202ENST00000346495 RHOXF2Q9BQY4 288 aa22.67■■□□□ 1.22
TSPAN3-202ENST00000346495 EPC1Q9H2F5 836 aa22.67■■□□□ 1.22
TSPAN3-202ENST00000346495 ANKZF1Q9H8Y5 726 aa22.67■■□□□ 1.22
TSPAN3-202ENST00000346495 HSPA8P11142 646 aaKnown RBP22.66■■□□□ 1.22
TSPAN3-202ENST00000346495 ODC1P11926 461 aa22.66■■□□□ 1.22
TSPAN3-202ENST00000346495 MARCKSL1P49006 195 aa22.66■■□□□ 1.22
TSPAN3-202ENST00000346495 FAAP100Q0VG06 881 aa22.66■■□□□ 1.22
TSPAN3-202ENST00000346495 BST2Q10589 180 aaKnown RBP22.66■■□□□ 1.22
TSPAN3-202ENST00000346495 PIGHQ14442 188 aaPredicted RBP22.66■■□□□ 1.22
TSPAN3-202ENST00000346495 TIGD5Q53EQ6 642 aa22.66■■□□□ 1.22
TSPAN3-202ENST00000346495 DCLRE1AQ6PJP8 1040 aa22.66■■□□□ 1.22
TSPAN3-202ENST00000346495 SLC35F5Q8WV83 523 aa22.66■■□□□ 1.22
TSPAN3-202ENST00000346495 LPIN3Q9BQK8 851 aa22.66■■□□□ 1.22
TSPAN3-202ENST00000346495 ST7Q9NRC1 585 aa22.66■■□□□ 1.22
TSPAN3-202ENST00000346495 RBM12Q9NTZ6 932 aaKnown RBP22.66■■□□□ 1.22
TSPAN3-202ENST00000346495 DDX43Q9NXZ2 648 aaKnown RBP22.66■■□□□ 1.22
TSPAN3-202ENST00000346495 SBDSQ9Y3A5 250 aaKnown RBP eCLIP22.66■■□□□ 1.22
TSPAN3-202ENST00000346495 ARHGEF37A1IGU5 675 aa22.65■■□□□ 1.22
TSPAN3-202ENST00000346495 TUBBP07437 444 aa22.65■■□□□ 1.22
TSPAN3-202ENST00000346495 CCDC130P13994 396 aa22.65■■□□□ 1.22
TSPAN3-202ENST00000346495 PTPN1P18031 435 aaKnown RBP22.65■■□□□ 1.22
TSPAN3-202ENST00000346495 ADORA2BP29275 332 aa22.65■■□□□ 1.22
TSPAN3-202ENST00000346495 TLE2Q04725 743 aa22.65■■□□□ 1.22
TSPAN3-202ENST00000346495 TRIM60Q495X7 471 aa22.65■■□□□ 1.22
TSPAN3-202ENST00000346495 SEL1L2Q5TEA6 688 aa22.65■■□□□ 1.22
TSPAN3-202ENST00000346495 PLVAPQ9BX97 442 aa22.65■■□□□ 1.22
TSPAN3-202ENST00000346495 SLC4A5Q9BY07 1137 aa22.65■■□□□ 1.22
TSPAN3-202ENST00000346495 PARD6BQ9BYG5 372 aa22.65■■□□□ 1.22
TSPAN3-202ENST00000346495 TMEM59LQ9UK28 342 aa22.65■■□□□ 1.22
TSPAN3-202ENST00000346495 DSEQ9UL01 958 aa22.65■■□□□ 1.22
TSPAN3-202ENST00000346495 PSTPIP1O43586 416 aa22.64■■□□□ 1.22
TSPAN3-202ENST00000346495 PDE4CQ08493 712 aa22.64■■□□□ 1.22
TSPAN3-202ENST00000346495 ZNF211Q13398 564 aaPredicted RBP22.64■■□□□ 1.22
TSPAN3-202ENST00000346495 METTL23Q86XA0 190 aa22.64■■□□□ 1.22
TSPAN3-202ENST00000346495 RHOT1Q8IXI2 618 aa22.64■■□□□ 1.22
TSPAN3-202ENST00000346495 NIPA2Q8N8Q9 360 aa22.64■■□□□ 1.22
TSPAN3-202ENST00000346495 ANKLE1Q8NAG6 615 aa22.64■■□□□ 1.22
TSPAN3-202ENST00000346495 FNIP1Q8TF40 1166 aa22.64■■□□□ 1.22
TSPAN3-202ENST00000346495 HNRNPABQ99729 332 aaKnown RBP22.64■■□□□ 1.22
TSPAN3-202ENST00000346495 CYLDQ9NQC7 956 aa22.64■■□□□ 1.22
TSPAN3-202ENST00000346495 METTL5Q9NRN9 209 aaKnown RBP22.64■■□□□ 1.22
TSPAN3-202ENST00000346495 ARGLU1Q9NWB6 273 aaPredicted RBP22.64■■□□□ 1.22
TSPAN3-202ENST00000346495 PCDHB7Q9Y5E2 793 aa22.64■■□□□ 1.22
TSPAN3-202ENST00000346495 TSC2P49815 1807 aa22.64■■□□□ 1.21
TSPAN3-202ENST00000346495 TARSL2A2RTX5 802 aaKnown RBP22.64■■□□□ 1.21
TSPAN3-202ENST00000346495 E5RJQ4 531 aa22.64■■□□□ 1.21
TSPAN3-202ENST00000346495 CCDC188H7C350 402 aa22.64■■□□□ 1.21
TSPAN3-202ENST00000346495 FGGP02679 453 aa22.64■■□□□ 1.21
TSPAN3-202ENST00000346495 CXCL10P02778 98 aa22.64■■□□□ 1.21
TSPAN3-202ENST00000346495 CYP11A1P05108 521 aa22.64■■□□□ 1.21
TSPAN3-202ENST00000346495 H2AFXP16104 143 aaPredicted RBP22.64■■□□□ 1.21
TSPAN3-202ENST00000346495 DSC1Q08554 894 aa22.64■■□□□ 1.21
TSPAN3-202ENST00000346495 LONRF2Q1L5Z9 754 aa22.64■■□□□ 1.21
TSPAN3-202ENST00000346495 PMF1Q6P1K2 205 aa22.64■■□□□ 1.21
TSPAN3-202ENST00000346495 CD300LGQ6UXG3 332 aa22.64■■□□□ 1.21
TSPAN3-202ENST00000346495 TMEM110Q86TL2 294 aa22.64■■□□□ 1.21
TSPAN3-202ENST00000346495 SLC2A14Q8TDB8 520 aa22.64■■□□□ 1.21
TSPAN3-202ENST00000346495 CDH9Q9ULB4 789 aa22.64■■□□□ 1.21
TSPAN3-202ENST00000346495 USTQ9Y2C2 406 aa22.64■■□□□ 1.21
TSPAN3-202ENST00000346495 SCN5AQ14524 2016 aa22.64■■□□□ 1.21
TSPAN3-202ENST00000346495 M0QZQ0 153 aa22.63■■□□□ 1.21
TSPAN3-202ENST00000346495 KRIT1O00522 736 aa22.63■■□□□ 1.21
TSPAN3-202ENST00000346495 ACAT1P24752 427 aaKnown RBP22.63■■□□□ 1.21
TSPAN3-202ENST00000346495 RFC1P35251 1148 aaPredicted RBP22.63■■□□□ 1.21
TSPAN3-202ENST00000346495 GJA8P48165 433 aa22.63■■□□□ 1.21
TSPAN3-202ENST00000346495 RGS7P49802 495 aa22.63■■□□□ 1.21
TSPAN3-202ENST00000346495 OGDHQ02218 1023 aa22.63■■□□□ 1.21
TSPAN3-202ENST00000346495 ZNF252P-AS1Q0IIN9 211 aa22.63■■□□□ 1.21
TSPAN3-202ENST00000346495 GLE1Q53GS7 698 aaKnown RBP22.63■■□□□ 1.21
TSPAN3-202ENST00000346495 OR6B2Q6IFH4 312 aa22.63■■□□□ 1.21
TSPAN3-202ENST00000346495 SCLYQ96I15 445 aa22.63■■□□□ 1.21
TSPAN3-202ENST00000346495 SYT15Q9BQS2 421 aa22.63■■□□□ 1.21
TSPAN3-202ENST00000346495 RNF216Q9NWF9 866 aaPredicted RBP22.63■■□□□ 1.21
TSPAN3-202ENST00000346495 ATP2C2O75185 946 aa22.62■■□□□ 1.21
TSPAN3-202ENST00000346495 PYGMP11217 842 aa22.62■■□□□ 1.21
TSPAN3-202ENST00000346495 PCSK1P29120 753 aa22.62■■□□□ 1.21
TSPAN3-202ENST00000346495 BRCC3P46736 316 aa22.62■■□□□ 1.21
TSPAN3-202ENST00000346495 CCL23P55773 120 aa22.62■■□□□ 1.21
TSPAN3-202ENST00000346495 SLC8A3P57103 927 aa22.62■■□□□ 1.21
TSPAN3-202ENST00000346495 RNASELQ05823 741 aaKnown RBP22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms