RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 HLA-DRAP01903 254 aa14.39□□□□□ -0.11
HERPUD1-202ENST00000344114 C4BPAP04003 597 aaKnown RBP14.39□□□□□ -0.11
HERPUD1-202ENST00000344114 SOD2P04179 222 aa14.39□□□□□ -0.11
HERPUD1-202ENST00000344114 PNMA6AP0CW24 399 aaPredicted RBP14.39□□□□□ -0.11
HERPUD1-202ENST00000344114 MCF2P10911 925 aa14.39□□□□□ -0.11
HERPUD1-202ENST00000344114 PCBP1Q15365 356 aaKnown RBP eCLIP14.39□□□□□ -0.11
HERPUD1-202ENST00000344114 NAB2Q15742 525 aa14.39□□□□□ -0.11
HERPUD1-202ENST00000344114 AMHR2Q16671 573 aa14.39□□□□□ -0.11
HERPUD1-202ENST00000344114 WDR44Q5JSH3 913 aa14.39□□□□□ -0.11
HERPUD1-202ENST00000344114 ZBTB41Q5SVQ8 909 aa14.39□□□□□ -0.11
HERPUD1-202ENST00000344114 TDRD10Q5VZ19 366 aaKnown RBP14.39□□□□□ -0.11
HERPUD1-202ENST00000344114 SMYD5Q6GMV2 418 aa14.39□□□□□ -0.11
HERPUD1-202ENST00000344114 MRPL10Q7Z7H8 261 aaKnown RBP14.39□□□□□ -0.11
HERPUD1-202ENST00000344114 RNF168Q8IYW5 571 aaPredicted RBP14.39□□□□□ -0.11
HERPUD1-202ENST00000344114 SLC44A3Q8N4M1 653 aa14.39□□□□□ -0.11
HERPUD1-202ENST00000344114 RNF10Q8N5U6 811 aaKnown RBP14.39□□□□□ -0.11
HERPUD1-202ENST00000344114 URGCPQ8TCY9 931 aa14.39□□□□□ -0.11
HERPUD1-202ENST00000344114 SHC3Q92529 594 aa14.39□□□□□ -0.11
HERPUD1-202ENST00000344114 ZNF516Q92618 1163 aa14.39□□□□□ -0.11
HERPUD1-202ENST00000344114 NXPE3Q969Y0 559 aa14.39□□□□□ -0.11
HERPUD1-202ENST00000344114 ALS2CR12Q96Q35 445 aa14.39□□□□□ -0.11
HERPUD1-202ENST00000344114 SYT11Q9BT88 431 aa14.39□□□□□ -0.11
HERPUD1-202ENST00000344114 HERC2P3Q9BVR0 1158 aa14.39□□□□□ -0.11
HERPUD1-202ENST00000344114 CDT1Q9H211 546 aa14.39□□□□□ -0.11
HERPUD1-202ENST00000344114 MINDY3Q9H8M7 445 aa14.39□□□□□ -0.11
HERPUD1-202ENST00000344114 MRPL17Q9NRX2 175 aaKnown RBP14.39□□□□□ -0.11
HERPUD1-202ENST00000344114 DLGAP2Q9P1A6 1054 aa14.39□□□□□ -0.11
HERPUD1-202ENST00000344114 INTUQ9ULD6 942 aa14.39□□□□□ -0.11
HERPUD1-202ENST00000344114 R4GN57 208 aa14.39□□□□□ -0.11
HERPUD1-202ENST00000344114 MIA3Q5JRA6 1907 aa14.38□□□□□ -0.11
HERPUD1-202ENST00000344114 PTPRJQ12913 1337 aa14.38□□□□□ -0.11
HERPUD1-202ENST00000344114 CCDC195A0A1B0GUA6 201 aa14.38□□□□□ -0.11
HERPUD1-202ENST00000344114 FOXN3O00409 490 aaPredicted RBP14.38□□□□□ -0.11
HERPUD1-202ENST00000344114 NRP1O14786 923 aa14.38□□□□□ -0.11
HERPUD1-202ENST00000344114 LRRN2O75325 713 aa14.38□□□□□ -0.11
HERPUD1-202ENST00000344114 ERLIN2O94905 339 aa14.38□□□□□ -0.11
HERPUD1-202ENST00000344114 EFEMP2O95967 443 aa14.38□□□□□ -0.11
HERPUD1-202ENST00000344114 ALDH2P05091 517 aa14.38□□□□□ -0.11
HERPUD1-202ENST00000344114 SRFP11831 508 aa14.38□□□□□ -0.11
HERPUD1-202ENST00000344114 TNFSF9P41273 254 aa14.38□□□□□ -0.11
HERPUD1-202ENST00000344114 AFF1P51825 1210 aaKnown RBP14.38□□□□□ -0.11
HERPUD1-202ENST00000344114 WNT7BP56706 349 aa14.38□□□□□ -0.11
HERPUD1-202ENST00000344114 BIRC3Q13489 604 aa14.38□□□□□ -0.11
HERPUD1-202ENST00000344114 ALKBH5Q6P6C2 394 aaKnown RBP14.38□□□□□ -0.11
HERPUD1-202ENST00000344114 CATSPER4Q7RTX7 472 aa14.38□□□□□ -0.11
HERPUD1-202ENST00000344114 DGLUCYQ7Z3D6 616 aa14.38□□□□□ -0.11
HERPUD1-202ENST00000344114 APBB1IPQ7Z5R6 666 aaPredicted RBP14.38□□□□□ -0.11
HERPUD1-202ENST00000344114 FAM71AQ8IYT1 594 aa14.38□□□□□ -0.11
HERPUD1-202ENST00000344114 KREMEN1Q96MU8 473 aa14.38□□□□□ -0.11
HERPUD1-202ENST00000344114 MYADMQ96S97 322 aa14.38□□□□□ -0.11
HERPUD1-202ENST00000344114 TBC1D17Q9HA65 648 aa14.38□□□□□ -0.11
HERPUD1-202ENST00000344114 RSAD1Q9HA92 442 aa14.38□□□□□ -0.11
HERPUD1-202ENST00000344114 MARCH5Q9NX47 278 aa14.38□□□□□ -0.11
HERPUD1-202ENST00000344114 NAGPAQ9UK23 515 aa14.38□□□□□ -0.11
HERPUD1-202ENST00000344114 TFR2Q9UP52 801 aa14.38□□□□□ -0.11
HERPUD1-202ENST00000344114 SSX2IPQ9Y2D8 614 aa14.38□□□□□ -0.11
HERPUD1-202ENST00000344114 FAN1Q9Y2M0 1017 aa14.38□□□□□ -0.11
HERPUD1-202ENST00000344114 PCDHB2Q9Y5E7 798 aa14.38□□□□□ -0.11
HERPUD1-202ENST00000344114 EP300Q09472 2414 aaPredicted RBP14.38□□□□□ -0.11
HERPUD1-202ENST00000344114 PATJQ8NI35 1801 aa14.38□□□□□ -0.11
HERPUD1-202ENST00000344114 MACROD2A1Z1Q3 448 aa14.37□□□□□ -0.11
HERPUD1-202ENST00000344114 INPPL1O15357 1258 aa14.37□□□□□ -0.11
HERPUD1-202ENST00000344114 B4GALT5O43286 388 aa14.37□□□□□ -0.11
HERPUD1-202ENST00000344114 URODP06132 367 aa14.37□□□□□ -0.11
HERPUD1-202ENST00000344114 GBP2P32456 591 aaPredicted RBP14.37□□□□□ -0.11
HERPUD1-202ENST00000344114 PUM1Q14671 1186 aaKnown RBP eCLIP14.37□□□□□ -0.11
HERPUD1-202ENST00000344114 EEF1DP3Q658K8 133 aa14.37□□□□□ -0.11
HERPUD1-202ENST00000344114 LMBRD2Q68DH5 695 aaPredicted RBP14.37□□□□□ -0.11
HERPUD1-202ENST00000344114 KIAA2013Q8IYS2 634 aa14.37□□□□□ -0.11
HERPUD1-202ENST00000344114 SLC30A5Q8TAD4 765 aa14.37□□□□□ -0.11
HERPUD1-202ENST00000344114 LNX1Q8TBB1 728 aaPredicted RBP14.37□□□□□ -0.11
HERPUD1-202ENST00000344114 RIN2Q8WYP3 895 aaPredicted RBP14.37□□□□□ -0.11
HERPUD1-202ENST00000344114 NOX5Q96PH1 765 aa14.37□□□□□ -0.11
HERPUD1-202ENST00000344114 RPS6KC1Q96S38 1066 aa14.37□□□□□ -0.11
HERPUD1-202ENST00000344114 IMPG2Q9BZV3 1241 aa14.37□□□□□ -0.11
HERPUD1-202ENST00000344114 PDZD7Q9H5P4 517 aa14.37□□□□□ -0.11
HERPUD1-202ENST00000344114 RXFP1Q9HBX9 757 aa14.37□□□□□ -0.11
HERPUD1-202ENST00000344114 KANSL3Q9P2N6 904 aa14.37□□□□□ -0.11
HERPUD1-202ENST00000344114 DPP7Q9UHL4 492 aa14.37□□□□□ -0.11
HERPUD1-202ENST00000344114 CA14Q9ULX7 337 aa14.37□□□□□ -0.11
HERPUD1-202ENST00000344114 TULP1O00294 542 aaPredicted RBP14.36□□□□□ -0.11
HERPUD1-202ENST00000344114 STK25O00506 426 aa14.36□□□□□ -0.11
HERPUD1-202ENST00000344114 DDX3XO00571 662 aaKnown RBP eCLIP14.36□□□□□ -0.113e-18■■■■□ 26.5
HERPUD1-202ENST00000344114 TEX28O15482 410 aa14.36□□□□□ -0.11
HERPUD1-202ENST00000344114 PHACTR2O75167 634 aa14.36□□□□□ -0.11
HERPUD1-202ENST00000344114 VNN1O95497 513 aa14.36□□□□□ -0.11
HERPUD1-202ENST00000344114 ADH1AP07327 375 aa14.36□□□□□ -0.11
HERPUD1-202ENST00000344114 SP9P0CG40 484 aa14.36□□□□□ -0.11
HERPUD1-202ENST00000344114 TNFAIP3P21580 790 aa14.36□□□□□ -0.11
HERPUD1-202ENST00000344114 TBXAS1P24557 533 aaPredicted RBP14.36□□□□□ -0.11
HERPUD1-202ENST00000344114 IFI16Q16666 785 aaKnown RBP14.36□□□□□ -0.11
HERPUD1-202ENST00000344114 DCAF4L1Q3SXM0 396 aa14.36□□□□□ -0.11
HERPUD1-202ENST00000344114 UBXN11Q5T124 520 aa14.36□□□□□ -0.11
HERPUD1-202ENST00000344114 ZC3H14Q6PJT7 736 aaKnown RBP14.36□□□□□ -0.11
HERPUD1-202ENST00000344114 OLIG1Q8TAK6 271 aa14.36□□□□□ -0.11
HERPUD1-202ENST00000344114 GPR152Q8TDT2 470 aa14.36□□□□□ -0.11
HERPUD1-202ENST00000344114 HDAC7Q8WUI4 952 aa14.36□□□□□ -0.11
HERPUD1-202ENST00000344114 ZNF707Q96C28 371 aaPredicted RBP14.36□□□□□ -0.11
HERPUD1-202ENST00000344114 FAM193BQ96PV7 902 aaPredicted RBP14.36□□□□□ -0.11
HERPUD1-202ENST00000344114 ADPGKQ9BRR6 497 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms