RNA–Protein interactions for RNA: ENST00000344063.6

RPL28-201, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 4,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-201ENST00000344063 SOX11P35716 441 aa11.37□□□□□ -0.59
RPL28-201ENST00000344063 BMT2Q1RMZ1 405 aa11.37□□□□□ -0.59
RPL28-201ENST00000344063 ARHGEF19Q8IW93 802 aa11.37□□□□□ -0.59
RPL28-201ENST00000344063 SCUBE1Q8IWY4 988 aa11.37□□□□□ -0.59
RPL28-201ENST00000344063 MPP4Q96JB8 637 aa11.37□□□□□ -0.59
RPL28-201ENST00000344063 TMEM39BQ9GZU3 492 aa11.37□□□□□ -0.59
RPL28-201ENST00000344063 SLC24A2Q9UI40 661 aa11.37□□□□□ -0.59
RPL28-201ENST00000344063 SYNPO2Q9UMS6 1093 aa11.37□□□□□ -0.59
RPL28-201ENST00000344063 SPATA31A6Q5VVP1 1343 aa11.37□□□□□ -0.59
RPL28-201ENST00000344063 UNC5CO95185 931 aa11.37□□□□□ -0.59
RPL28-201ENST00000344063 FAM200BP0CF97 657 aa11.37□□□□□ -0.59
RPL28-201ENST00000344063 GSTT1P30711 240 aa11.37□□□□□ -0.59
RPL28-201ENST00000344063 STIP1P31948 543 aaKnown RBP11.37□□□□□ -0.59
RPL28-201ENST00000344063 MARCKSL1P49006 195 aa11.37□□□□□ -0.59
RPL28-201ENST00000344063 GCNT1Q02742 428 aa11.37□□□□□ -0.59
RPL28-201ENST00000344063 SLC34A1Q06495 639 aa11.37□□□□□ -0.59
RPL28-201ENST00000344063 TTLL4Q14679 1199 aa11.37□□□□□ -0.59
RPL28-201ENST00000344063 PCNX4Q63HM2 1172 aa11.37□□□□□ -0.59
RPL28-201ENST00000344063 NIPA1Q7RTP0 329 aa11.37□□□□□ -0.59
RPL28-201ENST00000344063 C1orf131Q8NDD1 294 aaKnown RBP11.37□□□□□ -0.59
RPL28-201ENST00000344063 HES6Q96HZ4 224 aa11.37□□□□□ -0.59
RPL28-201ENST00000344063 AVENQ9NQS1 362 aaPredicted RBP11.37□□□□□ -0.59
RPL28-201ENST00000344063 DPPA5A6NC42 116 aa11.36□□□□□ -0.59
RPL28-201ENST00000344063 MEIS2O14770 477 aa11.36□□□□□ -0.59
RPL28-201ENST00000344063 VIL1P09327 827 aaKnown RBP11.36□□□□□ -0.59
RPL28-201ENST00000344063 BGNP21810 368 aa11.36□□□□□ -0.59
RPL28-201ENST00000344063 KCNA1Q09470 495 aa11.36□□□□□ -0.59
RPL28-201ENST00000344063 SLC12A1Q13621 1099 aa11.36□□□□□ -0.59
RPL28-201ENST00000344063 PKN2Q16513 984 aaKnown RBP11.36□□□□□ -0.59
RPL28-201ENST00000344063 TFDP3Q5H9I0 405 aa11.36□□□□□ -0.59
RPL28-201ENST00000344063 APOBEC3HQ6NTF7 200 aaKnown RBP11.36□□□□□ -0.59
RPL28-201ENST00000344063 EXOC3L1Q86VI1 746 aa11.36□□□□□ -0.59
RPL28-201ENST00000344063 MCOLN2Q8IZK6 566 aa11.36□□□□□ -0.59
RPL28-201ENST00000344063 ZNF280CQ8ND82 737 aa11.36□□□□□ -0.59
RPL28-201ENST00000344063 VPS39Q96JC1 886 aa11.36□□□□□ -0.59
RPL28-201ENST00000344063 ARHGAP26Q9UNA1 814 aa11.36□□□□□ -0.59
RPL28-201ENST00000344063 PIK3R2O00459 728 aa11.36□□□□□ -0.59
RPL28-201ENST00000344063 WEE2P0C1S8 567 aa11.36□□□□□ -0.59
RPL28-201ENST00000344063 ROR2Q01974 943 aaKnown RBP11.36□□□□□ -0.59
RPL28-201ENST00000344063 RASA2Q15283 850 aa11.36□□□□□ -0.59
RPL28-201ENST00000344063 C4orf22Q6V702 233 aa11.36□□□□□ -0.59
RPL28-201ENST00000344063 METTL23Q86XA0 190 aa11.36□□□□□ -0.59
RPL28-201ENST00000344063 NKX2-3Q8TAU0 364 aa11.36□□□□□ -0.59
RPL28-201ENST00000344063 EME1Q96AY2 570 aa11.36□□□□□ -0.59
RPL28-201ENST00000344063 TMA16Q96EY4 203 aaKnown RBP11.36□□□□□ -0.59
RPL28-201ENST00000344063 CCT7Q99832 543 aa11.36□□□□□ -0.59
RPL28-201ENST00000344063 DCLK3Q9C098 648 aa11.36□□□□□ -0.59
RPL28-201ENST00000344063 ZNF518BQ9C0D4 1074 aa11.36□□□□□ -0.59
RPL28-201ENST00000344063 UPF3AQ9H1J1 476 aaKnown RBP11.36□□□□□ -0.59
RPL28-201ENST00000344063 CAAP1Q9H8G2 361 aa11.36□□□□□ -0.59
RPL28-201ENST00000344063 TAS2R14Q9NYV8 317 aa11.36□□□□□ -0.59
RPL28-201ENST00000344063 MED1Q15648 1581 aaPredicted RBP11.36□□□□□ -0.59
RPL28-201ENST00000344063 AHCYL1O43865 530 aa11.36□□□□□ -0.59
RPL28-201ENST00000344063 IL18RAPO95256 599 aa11.36□□□□□ -0.59
RPL28-201ENST00000344063 GH1P01241 217 aa11.36□□□□□ -0.59
RPL28-201ENST00000344063 ACTR2P61160 394 aa11.36□□□□□ -0.59
RPL28-201ENST00000344063 OCRLQ01968 901 aa11.36□□□□□ -0.59
RPL28-201ENST00000344063 IER5Q5VY09 327 aa11.36□□□□□ -0.59
RPL28-201ENST00000344063 KLC3Q6P597 504 aa11.36□□□□□ -0.59
RPL28-201ENST00000344063 SLC9A9Q8IVB4 645 aa11.36□□□□□ -0.59
RPL28-201ENST00000344063 ZNF668Q96K58 619 aaPredicted RBP11.36□□□□□ -0.59
RPL28-201ENST00000344063 DRC3Q9H069 523 aa11.36□□□□□ -0.59
RPL28-201ENST00000344063 AGO4Q9HCK5 861 aaKnown RBP11.36□□□□□ -0.59
RPL28-201ENST00000344063 CHD2O14647 1828 aaKnown RBP11.36□□□□□ -0.59
RPL28-201ENST00000344063 MEI4A8MW99 385 aa11.36□□□□□ -0.59
RPL28-201ENST00000344063 TRIM49D1C9J1S8 452 aa11.36□□□□□ -0.59
RPL28-201ENST00000344063 TLR2O60603 784 aa11.36□□□□□ -0.59
RPL28-201ENST00000344063 HUS1O60921 280 aa11.36□□□□□ -0.59
RPL28-201ENST00000344063 PDE5AO76074 875 aa11.36□□□□□ -0.59
RPL28-201ENST00000344063 NUDT17P0C025 328 aa11.36□□□□□ -0.59
RPL28-201ENST00000344063 IRGCQ6NXR0 463 aa11.36□□□□□ -0.59
RPL28-201ENST00000344063 LNX1Q8TBB1 728 aaPredicted RBP11.36□□□□□ -0.59
RPL28-201ENST00000344063 VCPIP1Q96JH7 1222 aa11.36□□□□□ -0.59
RPL28-201ENST00000344063 SPATA33Q96N06 139 aa11.36□□□□□ -0.59
RPL28-201ENST00000344063 HAUS8Q9BT25 410 aa11.36□□□□□ -0.59
RPL28-201ENST00000344063 NINJ2Q9NZG7 142 aa11.36□□□□□ -0.59
RPL28-201ENST00000344063 PCYOX1Q9UHG3 505 aa11.36□□□□□ -0.59
RPL28-201ENST00000344063 POLRMTO00411 1230 aaKnown RBP11.35□□□□□ -0.59
RPL28-201ENST00000344063 MAP3K6O95382 1288 aa11.35□□□□□ -0.59
RPL28-201ENST00000344063 OATP04181 439 aa11.35□□□□□ -0.59
RPL28-201ENST00000344063 PCYT1AP49585 367 aa11.35□□□□□ -0.59
RPL28-201ENST00000344063 RBP5P82980 135 aa11.35□□□□□ -0.59
RPL28-201ENST00000344063 C1QBPQ07021 282 aaKnown RBP11.35□□□□□ -0.59
RPL28-201ENST00000344063 CCDC92Q53HC0 331 aaPredicted RBP11.35□□□□□ -0.59
RPL28-201ENST00000344063 WASHC2DQ5SRD0 308 aa11.35□□□□□ -0.59
RPL28-201ENST00000344063 FAXCQ5TGI0 409 aa11.35□□□□□ -0.59
RPL28-201ENST00000344063 MROH9Q5TGP6 573 aa11.35□□□□□ -0.59
RPL28-201ENST00000344063 FAM43BQ6ZT52 329 aaPredicted RBP11.35□□□□□ -0.59
RPL28-201ENST00000344063 BBS5Q8N3I7 341 aa11.35□□□□□ -0.59
RPL28-201ENST00000344063 CKAP2Q8WWK9 683 aa11.35□□□□□ -0.59
RPL28-201ENST00000344063 E2F7Q96AV8 911 aa11.35□□□□□ -0.59
RPL28-201ENST00000344063 ATG4CQ96DT6 458 aa11.35□□□□□ -0.59
RPL28-201ENST00000344063 CLMNQ96JQ2 1002 aa11.35□□□□□ -0.59
RPL28-201ENST00000344063 FAM49AQ9H0Q0 323 aaPredicted RBP11.35□□□□□ -0.59
RPL28-201ENST00000344063 MRPL40Q9NQ50 206 aaKnown RBP11.35□□□□□ -0.59
RPL28-201ENST00000344063 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.35□□□□□ -0.593e-6■■■■□ 25.1
RPL28-201ENST00000344063 APPL1Q9UKG1 709 aa11.35□□□□□ -0.59
RPL28-201ENST00000344063 AGAP1Q9UPQ3 857 aa11.35□□□□□ -0.59
RPL28-201ENST00000344063 KDM3BQ7LBC6 1761 aa11.35□□□□□ -0.59
RPL28-201ENST00000344063 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms