RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 PIK3CDO00329 1044 aa8.51□□□□□ -1.05
ATG4A-201ENST00000343524 KLF11O14901 512 aa8.51□□□□□ -1.05
ATG4A-201ENST00000343524 FSCN2O14926 492 aa8.51□□□□□ -1.05
ATG4A-201ENST00000343524 MAGEB3O15480 346 aa8.51□□□□□ -1.05
ATG4A-201ENST00000343524 CA12O43570 354 aa8.51□□□□□ -1.05
ATG4A-201ENST00000343524 CYTH3O43739 400 aa8.51□□□□□ -1.05
ATG4A-201ENST00000343524 CCNT2O60583 730 aaKnown RBP8.51□□□□□ -1.05
ATG4A-201ENST00000343524 FAM58BPP0C7Q3 252 aa8.51□□□□□ -1.05
ATG4A-201ENST00000343524 OCM2P0CE71 109 aa8.51□□□□□ -1.05
ATG4A-201ENST00000343524 OCMP0CE72 109 aaPredicted RBP8.51□□□□□ -1.05
ATG4A-201ENST00000343524 GSTT2P0CG29 244 aa8.51□□□□□ -1.05
ATG4A-201ENST00000343524 GSTT2BP0CG30 244 aa8.51□□□□□ -1.05
ATG4A-201ENST00000343524 NAT1P18440 290 aa8.51□□□□□ -1.05
ATG4A-201ENST00000343524 POLR2EP19388 210 aaKnown RBP8.51□□□□□ -1.05
ATG4A-201ENST00000343524 FUT4P22083 530 aa8.51□□□□□ -1.05
ATG4A-201ENST00000343524 MAGEA4P43358 317 aa8.51□□□□□ -1.05
ATG4A-201ENST00000343524 PHKA2P46019 1235 aa8.51□□□□□ -1.05
ATG4A-201ENST00000343524 BCAP31P51572 246 aa8.51□□□□□ -1.05
ATG4A-201ENST00000343524 PFKPQ01813 784 aa8.51□□□□□ -1.05
ATG4A-201ENST00000343524 DLG1Q12959 904 aa8.51□□□□□ -1.05
ATG4A-201ENST00000343524 MSLNQ13421 630 aaPredicted RBP8.51□□□□□ -1.05
ATG4A-201ENST00000343524 MYBPC2Q14324 1141 aa8.51□□□□□ -1.05
ATG4A-201ENST00000343524 GRM4Q14833 912 aa8.51□□□□□ -1.05
ATG4A-201ENST00000343524 SIX1Q15475 284 aaPredicted RBP8.51□□□□□ -1.05
ATG4A-201ENST00000343524 TRIP10Q15642 601 aa8.51□□□□□ -1.05
ATG4A-201ENST00000343524 SFT2D3Q587I9 215 aa8.51□□□□□ -1.05
ATG4A-201ENST00000343524 SLC2A7Q6PXP3 512 aa8.51□□□□□ -1.05
ATG4A-201ENST00000343524 HEATR3Q7Z4Q2 680 aa8.51□□□□□ -1.05
ATG4A-201ENST00000343524 IQCF2Q8IXL9 164 aa8.51□□□□□ -1.05
ATG4A-201ENST00000343524 TERB1Q8NA31 727 aa8.51□□□□□ -1.05
ATG4A-201ENST00000343524 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.51□□□□□ -1.05
ATG4A-201ENST00000343524 LSM14AQ8ND56 463 aaKnown RBP8.51□□□□□ -1.05
ATG4A-201ENST00000343524 RBM15BQ8NDT2 890 aaKnown RBP8.51□□□□□ -1.05
ATG4A-201ENST00000343524 RFWD2Q8NHY2 731 aa8.51□□□□□ -1.05
ATG4A-201ENST00000343524 ZCRB1Q8TBF4 217 aaKnown RBP8.51□□□□□ -1.05
ATG4A-201ENST00000343524 RASGRP4Q8TDF6 673 aa8.51□□□□□ -1.05
ATG4A-201ENST00000343524 GPKOWQ92917 476 aaPredicted RBP eCLIP8.51□□□□□ -1.05
ATG4A-201ENST00000343524 DNAJC19Q96DA6 116 aa8.51□□□□□ -1.05
ATG4A-201ENST00000343524 LRGUKQ96M69 825 aa8.51□□□□□ -1.05
ATG4A-201ENST00000343524 OLFM1Q99784 485 aa8.51□□□□□ -1.05
ATG4A-201ENST00000343524 SYT11Q9BT88 431 aa8.51□□□□□ -1.05
ATG4A-201ENST00000343524 THTPAQ9BU02 230 aa8.51□□□□□ -1.05
ATG4A-201ENST00000343524 THAP2Q9H0W7 228 aa8.51□□□□□ -1.05
ATG4A-201ENST00000343524 RRN3Q9NYV6 651 aa8.51□□□□□ -1.05
ATG4A-201ENST00000343524 EPS15L1Q9UBC2 864 aa8.51□□□□□ -1.05
ATG4A-201ENST00000343524 BCAP29Q9UHQ4 241 aa8.51□□□□□ -1.05
ATG4A-201ENST00000343524 GIT1Q9Y2X7 761 aa8.51□□□□□ -1.05
ATG4A-201ENST00000343524 NFASCO94856 1347 aa8.51□□□□□ -1.05
ATG4A-201ENST00000343524 ESYT2A0FGR8 921 aa8.5□□□□□ -1.05
ATG4A-201ENST00000343524 FUOMA2VDF0 154 aa8.5□□□□□ -1.05
ATG4A-201ENST00000343524 I3L4J1 428 aa8.5□□□□□ -1.05
ATG4A-201ENST00000343524 PDXKO00764 312 aa8.5□□□□□ -1.05
ATG4A-201ENST00000343524 CNOT3O75175 753 aaKnown RBP8.5□□□□□ -1.05
ATG4A-201ENST00000343524 CD48P09326 243 aa8.5□□□□□ -1.05
ATG4A-201ENST00000343524 PMLP29590 882 aa8.5□□□□□ -1.05
ATG4A-201ENST00000343524 SLC5A2P31639 672 aa8.5□□□□□ -1.05
ATG4A-201ENST00000343524 STIP1P31948 543 aaKnown RBP8.5□□□□□ -1.05
ATG4A-201ENST00000343524 CCT8P50990 548 aa8.5□□□□□ -1.05
ATG4A-201ENST00000343524 SF3B3Q15393 1217 aaKnown RBP8.5□□□□□ -1.05
ATG4A-201ENST00000343524 SLC1A5Q15758 541 aa8.5□□□□□ -1.05
ATG4A-201ENST00000343524 KLHL38Q2WGJ6 581 aa8.5□□□□□ -1.05
ATG4A-201ENST00000343524 MYLK3Q32MK0 819 aa8.5□□□□□ -1.05
ATG4A-201ENST00000343524 GRAMD1BQ3KR37 738 aa8.5□□□□□ -1.05
ATG4A-201ENST00000343524 PLEKHG4Q58EX7 1191 aa8.5□□□□□ -1.05
ATG4A-201ENST00000343524 DCAF17Q5H9S7 520 aaPredicted RBP8.5□□□□□ -1.05
ATG4A-201ENST00000343524 OGFRL1Q5TC84 451 aaPredicted RBP8.5□□□□□ -1.05
ATG4A-201ENST00000343524 MIER3Q7Z3K6 550 aa8.5□□□□□ -1.05
ATG4A-201ENST00000343524 TMC7Q7Z402 723 aa8.5□□□□□ -1.05
ATG4A-201ENST00000343524 DGKHQ86XP1 1220 aa8.5□□□□□ -1.05
ATG4A-201ENST00000343524 TRIM50Q86XT4 487 aa8.5□□□□□ -1.05
ATG4A-201ENST00000343524 CD101Q93033 1021 aa8.5□□□□□ -1.05
ATG4A-201ENST00000343524 ARHGEF26Q96DR7 871 aa8.5□□□□□ -1.05
ATG4A-201ENST00000343524 ANKRD36BP1Q96IX9 119 aa8.5□□□□□ -1.05
ATG4A-201ENST00000343524 NLRP4Q96MN2 994 aa8.5□□□□□ -1.05
ATG4A-201ENST00000343524 RBM15Q96T37 977 aaKnown RBP eCLIP8.5□□□□□ -1.05
ATG4A-201ENST00000343524 KLC2Q9H0B6 622 aa8.5□□□□□ -1.05
ATG4A-201ENST00000343524 GIN1Q9NXP7 522 aa8.5□□□□□ -1.05
ATG4A-201ENST00000343524 TMOD2Q9NZR1 351 aa8.5□□□□□ -1.05
ATG4A-201ENST00000343524 SELENONQ9NZV5 590 aa8.5□□□□□ -1.05
ATG4A-201ENST00000343524 IGSF9Q9P2J2 1179 aa8.5□□□□□ -1.05
ATG4A-201ENST00000343524 KANSL3Q9P2N6 904 aa8.5□□□□□ -1.05
ATG4A-201ENST00000343524 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.5□□□□□ -1.05
ATG4A-201ENST00000343524 TDRKHQ9Y2W6 561 aaKnown RBP8.5□□□□□ -1.05
ATG4A-201ENST00000343524 TRIM17Q9Y577 477 aa8.5□□□□□ -1.05
ATG4A-201ENST00000343524 MAD1L1Q9Y6D9 718 aa8.5□□□□□ -1.05
ATG4A-201ENST00000343524 CAPN14A8MX76 684 aa8.5□□□□□ -1.05
ATG4A-201ENST00000343524 TP73O15350 636 aa8.5□□□□□ -1.05
ATG4A-201ENST00000343524 KDM1AO60341 852 aa8.5□□□□□ -1.05
ATG4A-201ENST00000343524 MGEA5O60502 916 aa8.5□□□□□ -1.05
ATG4A-201ENST00000343524 USP1O94782 785 aa8.5□□□□□ -1.05
ATG4A-201ENST00000343524 DLDP09622 509 aaKnown RBP8.5□□□□□ -1.05
ATG4A-201ENST00000343524 DLATP10515 647 aaKnown RBP8.5□□□□□ -1.05
ATG4A-201ENST00000343524 PLS3P13797 630 aa8.5□□□□□ -1.05
ATG4A-201ENST00000343524 ZNF23P17027 643 aa8.5□□□□□ -1.05
ATG4A-201ENST00000343524 COMTP21964 271 aa8.5□□□□□ -1.05
ATG4A-201ENST00000343524 CDH3P22223 829 aa8.5□□□□□ -1.05
ATG4A-201ENST00000343524 ACAT1P24752 427 aaKnown RBP8.5□□□□□ -1.05
ATG4A-201ENST00000343524 IVDP26440 423 aa8.5□□□□□ -1.05
ATG4A-201ENST00000343524 ECE1P42892 770 aa8.5□□□□□ -1.05
ATG4A-201ENST00000343524 NAPAP54920 295 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms