RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 RNF39Q9H2S5 420 aa19.63■□□□□ 0.73
HOXA9-201ENST00000343483 CENPHQ9H3R5 247 aa19.63■□□□□ 0.73
HOXA9-201ENST00000343483 LRRC19Q9H756 370 aa19.63■□□□□ 0.73
HOXA9-201ENST00000343483 GRIN2DO15399 1336 aa19.63■□□□□ 0.73
HOXA9-201ENST00000343483 CITO14578 2027 aa19.63■□□□□ 0.73
HOXA9-201ENST00000343483 KPNA6O60684 536 aa19.63■□□□□ 0.73
HOXA9-201ENST00000343483 NR1D1P20393 614 aa19.63■□□□□ 0.73
HOXA9-201ENST00000343483 RFC1P35251 1148 aaPredicted RBP19.63■□□□□ 0.73
HOXA9-201ENST00000343483 GJA9P57773 515 aa19.63■□□□□ 0.73
HOXA9-201ENST00000343483 PDCLQ13371 301 aa19.63■□□□□ 0.73
HOXA9-201ENST00000343483 ATP13A4Q4VNC1 1196 aa19.63■□□□□ 0.73
HOXA9-201ENST00000343483 UBXN11Q5T124 520 aa19.63■□□□□ 0.73
HOXA9-201ENST00000343483 TAF2Q6P1X5 1199 aa19.63■□□□□ 0.73
HOXA9-201ENST00000343483 C12orf29Q8N999 325 aa19.63■□□□□ 0.73
HOXA9-201ENST00000343483 EXD1Q8NHP7 514 aa19.63■□□□□ 0.73
HOXA9-201ENST00000343483 RNF25Q96BH1 459 aaPredicted RBP19.63■□□□□ 0.73
HOXA9-201ENST00000343483 MRPL45Q9BRJ2 306 aaKnown RBP19.63■□□□□ 0.73
HOXA9-201ENST00000343483 CHST7Q9NS84 486 aa19.63■□□□□ 0.73
HOXA9-201ENST00000343483 RSPH14Q9UHP6 348 aa19.63■□□□□ 0.73
HOXA9-201ENST00000343483 UBQLN1Q9UMX0 589 aaKnown RBP19.63■□□□□ 0.73
HOXA9-201ENST00000343483 SMIM28A0A1B0GU29 152 aa19.62■□□□□ 0.73
HOXA9-201ENST00000343483 PI4K2BG5E9Z4 385 aa19.62■□□□□ 0.73
HOXA9-201ENST00000343483 ECEL1O95672 775 aa19.62■□□□□ 0.73
HOXA9-201ENST00000343483 MYCNP04198 464 aaPredicted RBP19.62■□□□□ 0.73
HOXA9-201ENST00000343483 GPD2P43304 727 aa19.62■□□□□ 0.73
HOXA9-201ENST00000343483 NBPF20Q3BBV1 942 aa19.62■□□□□ 0.73
HOXA9-201ENST00000343483 C9orf57Q5W0N0 161 aa19.62■□□□□ 0.73
HOXA9-201ENST00000343483 TWF2Q6IBS0 349 aaKnown RBP19.62■□□□□ 0.73
HOXA9-201ENST00000343483 SESTD1Q86VW0 696 aa19.62■□□□□ 0.73
HOXA9-201ENST00000343483 XYLT1Q86Y38 959 aa19.62■□□□□ 0.73
HOXA9-201ENST00000343483 LRRC52Q8N7C0 313 aa19.62■□□□□ 0.73
HOXA9-201ENST00000343483 OSBPL8Q9BZF1 889 aa19.62■□□□□ 0.73
HOXA9-201ENST00000343483 FAM124BQ9H5Z6 455 aaPredicted RBP19.62■□□□□ 0.73
HOXA9-201ENST00000343483 SPC25Q9HBM1 224 aa19.62■□□□□ 0.73
HOXA9-201ENST00000343483 ZDHHC18Q9NUE0 388 aa19.62■□□□□ 0.73
HOXA9-201ENST00000343483 SIGLEC16A6NMB1 481 aa19.61■□□□□ 0.73
HOXA9-201ENST00000343483 PPFIA2O75334 1257 aa19.61■□□□□ 0.73
HOXA9-201ENST00000343483 KRT1P04264 644 aa19.61■□□□□ 0.73
HOXA9-201ENST00000343483 PSMA2P25787 234 aa19.61■□□□□ 0.73
HOXA9-201ENST00000343483 DRG2P55039 364 aaKnown RBP19.61■□□□□ 0.73
HOXA9-201ENST00000343483 PLTPP55058 493 aa19.61■□□□□ 0.73
HOXA9-201ENST00000343483 PRKCZQ05513 592 aa19.61■□□□□ 0.73
HOXA9-201ENST00000343483 TRIM32Q13049 653 aa19.61■□□□□ 0.73
HOXA9-201ENST00000343483 PPP1R7Q15435 360 aa19.61■□□□□ 0.73
HOXA9-201ENST00000343483 ODF2Q5BJF6 829 aa19.61■□□□□ 0.73
HOXA9-201ENST00000343483 FAM47CQ5HY64 1035 aa19.61■□□□□ 0.73
HOXA9-201ENST00000343483 JOSD2Q8TAC2 188 aa19.61■□□□□ 0.73
HOXA9-201ENST00000343483 CD99L2Q8TCZ2 262 aa19.61■□□□□ 0.73
HOXA9-201ENST00000343483 METTL5Q9NRN9 209 aaKnown RBP19.61■□□□□ 0.73
HOXA9-201ENST00000343483 TSPAN16Q9UKR8 245 aa19.61■□□□□ 0.73
HOXA9-201ENST00000343483 ATP8A1Q9Y2Q0 1164 aa19.61■□□□□ 0.73
HOXA9-201ENST00000343483 IPPQ9Y573 584 aa19.61■□□□□ 0.73
HOXA9-201ENST00000343483 DNAH12Q6ZR08 3092 aa19.61■□□□□ 0.73
HOXA9-201ENST00000343483 M0QZ92 97 aa19.61■□□□□ 0.73
HOXA9-201ENST00000343483 ATF7P17544 494 aaPredicted RBP19.61■□□□□ 0.73
HOXA9-201ENST00000343483 CYP3A5P20815 502 aa19.61■□□□□ 0.73
HOXA9-201ENST00000343483 RPL21P46778 160 aaKnown RBP19.61■□□□□ 0.73
HOXA9-201ENST00000343483 ANKS1BQ7Z6G8 1248 aa19.61■□□□□ 0.73
HOXA9-201ENST00000343483 ACOT1Q86TX2 421 aa19.61■□□□□ 0.73
HOXA9-201ENST00000343483 NIPA2Q8N8Q9 360 aa19.61■□□□□ 0.73
HOXA9-201ENST00000343483 WDR35Q9P2L0 1181 aa19.61■□□□□ 0.73
HOXA9-201ENST00000343483 KIAA1257Q9ULG3 409 aa19.61■□□□□ 0.73
HOXA9-201ENST00000343483 R3HDM2Q9Y2K5 976 aaKnown RBP19.61■□□□□ 0.73
HOXA9-201ENST00000343483 RARBP10826 455 aa19.6■□□□□ 0.73
HOXA9-201ENST00000343483 CETN2P41208 172 aa19.6■□□□□ 0.73
HOXA9-201ENST00000343483 NFX1Q12986 1120 aaKnown RBP19.6■□□□□ 0.73
HOXA9-201ENST00000343483 KLF1Q13351 362 aaPredicted RBP19.6■□□□□ 0.73
HOXA9-201ENST00000343483 GOLGA7BQ2TAP0 167 aa19.6■□□□□ 0.73
HOXA9-201ENST00000343483 EMC10Q5UCC4 262 aa19.6■□□□□ 0.73
HOXA9-201ENST00000343483 LCLAT1Q6UWP7 414 aa19.6■□□□□ 0.73
HOXA9-201ENST00000343483 FAM228AQ86W67 206 aa19.6■□□□□ 0.73
HOXA9-201ENST00000343483 EMC1Q8N766 993 aa19.6■□□□□ 0.73
HOXA9-201ENST00000343483 ACSF2Q96CM8 615 aaPredicted RBP19.6■□□□□ 0.73
HOXA9-201ENST00000343483 RBM41Q96IZ5 413 aaKnown RBP19.6■□□□□ 0.73
HOXA9-201ENST00000343483 TXLNGYQ9BZA5 131 aa19.6■□□□□ 0.73
HOXA9-201ENST00000343483 GTF2IRD1Q9UHL9 959 aa19.6■□□□□ 0.73
HOXA9-201ENST00000343483 PIK3R2O00459 728 aa19.6■□□□□ 0.73
HOXA9-201ENST00000343483 CD4P01730 458 aa19.6■□□□□ 0.73
HOXA9-201ENST00000343483 MRPS6P82932 125 aaKnown RBP19.6■□□□□ 0.73
HOXA9-201ENST00000343483 SP3Q02447 781 aa19.6■□□□□ 0.73
HOXA9-201ENST00000343483 ZNF268Q14587 947 aaPredicted RBP19.6■□□□□ 0.73
HOXA9-201ENST00000343483 SKIDA1Q1XH10 827 aa19.6■□□□□ 0.73
HOXA9-201ENST00000343483 FBXO47Q5MNV8 452 aa19.6■□□□□ 0.73
HOXA9-201ENST00000343483 LRRC38Q5VT99 294 aa19.6■□□□□ 0.73
HOXA9-201ENST00000343483 KAZNQ674X7 775 aa19.6■□□□□ 0.73
HOXA9-201ENST00000343483 TXNRD3NBQ6F5E7 133 aa19.6■□□□□ 0.73
HOXA9-201ENST00000343483 GDF6Q6KF10 455 aaPredicted RBP19.6■□□□□ 0.73
HOXA9-201ENST00000343483 ZDHHC24Q6UX98 284 aa19.6■□□□□ 0.73
HOXA9-201ENST00000343483 RCOR2Q8IZ40 523 aa19.6■□□□□ 0.73
HOXA9-201ENST00000343483 OR6B3Q8NGW1 331 aa19.6■□□□□ 0.73
HOXA9-201ENST00000343483 FBXO25Q8TCJ0 367 aa19.6■□□□□ 0.73
HOXA9-201ENST00000343483 IPO4Q8TEX9 1081 aaKnown RBP19.6■□□□□ 0.73
HOXA9-201ENST00000343483 FAM118BQ9BPY3 351 aa19.6■□□□□ 0.73
HOXA9-201ENST00000343483 DCLK3Q9C098 648 aa19.6■□□□□ 0.73
HOXA9-201ENST00000343483 GOLGA2P5Q9HBQ8 144 aa19.6■□□□□ 0.73
HOXA9-201ENST00000343483 FAM49BQ9NUQ9 324 aa19.6■□□□□ 0.73
HOXA9-201ENST00000343483 GRHL1Q9NZI5 618 aa19.6■□□□□ 0.73
HOXA9-201ENST00000343483 CDY2AQ9Y6F7 541 aa19.6■□□□□ 0.73
HOXA9-201ENST00000343483 SEPT4O43236 478 aa19.59■□□□□ 0.73
HOXA9-201ENST00000343483 FKTNO75072 461 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms