RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 C2orf69Q8N8R5 385 aa8.41□□□□□ -1.06
UBE4B-202ENST00000343090 TMEM121Q9BTD3 319 aa8.41□□□□□ -1.06
UBE4B-202ENST00000343090 TASP1Q9H6P5 420 aa8.41□□□□□ -1.06
UBE4B-202ENST00000343090 RSAD1Q9HA92 442 aa8.41□□□□□ -1.06
UBE4B-202ENST00000343090 AFF4Q9UHB7 1163 aaKnown RBP8.41□□□□□ -1.06
UBE4B-202ENST00000343090 E5RI56 91 aa8.4□□□□□ -1.06
UBE4B-202ENST00000343090 AIM2O14862 343 aa8.4□□□□□ -1.06
UBE4B-202ENST00000343090 CSDE1O75534 798 aaKnown RBP8.4□□□□□ -1.06
UBE4B-202ENST00000343090 SEC24DO94855 1032 aaPredicted RBP8.4□□□□□ -1.06
UBE4B-202ENST00000343090 EEF1DP29692 281 aaKnown RBP8.4□□□□□ -1.06
UBE4B-202ENST00000343090 GRIK1P39086 918 aa8.4□□□□□ -1.06
UBE4B-202ENST00000343090 NUMBP49757 651 aa8.4□□□□□ -1.06
UBE4B-202ENST00000343090 USP10Q14694 798 aaKnown RBP8.4□□□□□ -1.06
UBE4B-202ENST00000343090 CYTH1Q15438 398 aa8.4□□□□□ -1.06
UBE4B-202ENST00000343090 SNX30Q5VWJ9 437 aa8.4□□□□□ -1.06
UBE4B-202ENST00000343090 MOXD1Q6UVY6 613 aa8.4□□□□□ -1.06
UBE4B-202ENST00000343090 TAS2R42Q7RTR8 314 aa8.4□□□□□ -1.06
UBE4B-202ENST00000343090 PRPF39Q86UA1 669 aaKnown RBP8.4□□□□□ -1.06
UBE4B-202ENST00000343090 SLC7A14Q8TBB6 771 aa8.4□□□□□ -1.06
UBE4B-202ENST00000343090 SLC4A9Q96Q91 983 aa8.4□□□□□ -1.06
UBE4B-202ENST00000343090 IL1RAPL1Q9NZN1 696 aa8.4□□□□□ -1.06
UBE4B-202ENST00000343090 WARS2Q9UGM6 360 aaKnown RBP8.4□□□□□ -1.06
UBE4B-202ENST00000343090 PHTF1Q9UMS5 762 aa8.4□□□□□ -1.06
UBE4B-202ENST00000343090 GRIN2DO15399 1336 aa8.4□□□□□ -1.06
UBE4B-202ENST00000343090 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.4□□□□□ -1.06
UBE4B-202ENST00000343090 EME2A4GXA9 379 aaPredicted RBP8.4□□□□□ -1.06
UBE4B-202ENST00000343090 RCCD1A6NED2 376 aa8.4□□□□□ -1.06
UBE4B-202ENST00000343090 E7ENQ6 273 aa8.4□□□□□ -1.06
UBE4B-202ENST00000343090 EML1O00423 815 aa8.4□□□□□ -1.06
UBE4B-202ENST00000343090 UPP2O95045 317 aa8.4□□□□□ -1.06
UBE4B-202ENST00000343090 SNRPAP09012 282 aaKnown RBP8.4□□□□□ -1.06
UBE4B-202ENST00000343090 MCF2P10911 925 aa8.4□□□□□ -1.06
UBE4B-202ENST00000343090 TMEM119Q4V9L6 283 aa8.4□□□□□ -1.06
UBE4B-202ENST00000343090 EMC1Q8N766 993 aa8.4□□□□□ -1.06
UBE4B-202ENST00000343090 RMDN1Q96DB5 314 aa8.4□□□□□ -1.06
UBE4B-202ENST00000343090 ZBTB18Q99592 522 aa8.4□□□□□ -1.06
UBE4B-202ENST00000343090 EPAS1Q99814 870 aa8.4□□□□□ -1.06
UBE4B-202ENST00000343090 MMADHCQ9H3L0 296 aaPredicted RBP8.4□□□□□ -1.06
UBE4B-202ENST00000343090 KLK14Q9P0G3 267 aa8.4□□□□□ -1.06
UBE4B-202ENST00000343090 PAK5Q9P286 719 aa8.4□□□□□ -1.06
UBE4B-202ENST00000343090 AURKCQ9UQB9 309 aa8.4□□□□□ -1.06
UBE4B-202ENST00000343090 MGEA5O60502 916 aa8.4□□□□□ -1.06
UBE4B-202ENST00000343090 NPTXRO95502 500 aa8.4□□□□□ -1.06
UBE4B-202ENST00000343090 TNFRSF8P28908 595 aa8.4□□□□□ -1.06
UBE4B-202ENST00000343090 GCLCP48506 637 aaPredicted RBP8.4□□□□□ -1.06
UBE4B-202ENST00000343090 CAPRIN1Q14444 709 aaKnown RBP8.4□□□□□ -1.06
UBE4B-202ENST00000343090 RBBP7Q16576 425 aa8.4□□□□□ -1.06
UBE4B-202ENST00000343090 ARID3BQ8IVW6 561 aaPredicted RBP8.4□□□□□ -1.06
UBE4B-202ENST00000343090 FBXO36Q8NEA4 188 aa8.4□□□□□ -1.06
UBE4B-202ENST00000343090 ELMO2Q96JJ3 720 aa8.4□□□□□ -1.06
UBE4B-202ENST00000343090 TRAPPC9Q96Q05 1148 aa8.4□□□□□ -1.06
UBE4B-202ENST00000343090 C20orf96Q9NUD7 363 aaPredicted RBP8.4□□□□□ -1.06
UBE4B-202ENST00000343090 DPPA5A6NC42 116 aa8.4□□□□□ -1.07
UBE4B-202ENST00000343090 DDX3XO00571 662 aaKnown RBP eCLIP8.4□□□□□ -1.07
UBE4B-202ENST00000343090 CALCAP01258 141 aa8.4□□□□□ -1.07
UBE4B-202ENST00000343090 ATP6V1B1P15313 513 aa8.4□□□□□ -1.07
UBE4B-202ENST00000343090 CLCN3P51790 818 aa8.4□□□□□ -1.07
UBE4B-202ENST00000343090 SNRPFP62306 86 aaKnown RBP8.4□□□□□ -1.07
UBE4B-202ENST00000343090 TTC39BQ5VTQ0 682 aaPredicted RBP8.4□□□□□ -1.07
UBE4B-202ENST00000343090 AADACL2Q6P093 401 aa8.4□□□□□ -1.07
UBE4B-202ENST00000343090 IZUMO2Q6UXV1 221 aa8.4□□□□□ -1.07
UBE4B-202ENST00000343090 GIPC2Q8TF65 315 aa8.4□□□□□ -1.07
UBE4B-202ENST00000343090 USP6NLQ92738 828 aa8.4□□□□□ -1.07
UBE4B-202ENST00000343090 EGFL8Q99944 293 aa8.4□□□□□ -1.07
UBE4B-202ENST00000343090 ING2Q9H160 280 aa8.4□□□□□ -1.07
UBE4B-202ENST00000343090 RNPEPL1Q9HAU8 725 aa8.4□□□□□ -1.07
UBE4B-202ENST00000343090 PALMDQ9NP74 551 aa8.4□□□□□ -1.07
UBE4B-202ENST00000343090 TBC1D23Q9NUY8 699 aa8.4□□□□□ -1.07
UBE4B-202ENST00000343090 CYP39A1Q9NYL5 469 aa8.4□□□□□ -1.07
UBE4B-202ENST00000343090 C3orf70A6NLC5 250 aaPredicted RBP8.39□□□□□ -1.07
UBE4B-202ENST00000343090 SLITRK3O94933 977 aa8.39□□□□□ -1.07
UBE4B-202ENST00000343090 IL1R1P14778 569 aa8.39□□□□□ -1.07
UBE4B-202ENST00000343090 CPB1P15086 417 aa8.39□□□□□ -1.07
UBE4B-202ENST00000343090 HSD17B4P51659 736 aa8.39□□□□□ -1.07
UBE4B-202ENST00000343090 CASP5P51878 434 aa8.39□□□□□ -1.07
UBE4B-202ENST00000343090 IFI35P80217 286 aaPredicted RBP8.39□□□□□ -1.07
UBE4B-202ENST00000343090 OTUD4Q01804 1114 aaKnown RBP8.39□□□□□ -1.07
UBE4B-202ENST00000343090 WASHC2DQ5SRD0 308 aa8.39□□□□□ -1.07
UBE4B-202ENST00000343090 SV2AQ7L0J3 742 aa8.39□□□□□ -1.07
UBE4B-202ENST00000343090 SLC25A41Q8N5S1 370 aa8.39□□□□□ -1.07
UBE4B-202ENST00000343090 SLC5A5Q92911 643 aa8.39□□□□□ -1.07
UBE4B-202ENST00000343090 SLC35C1Q96A29 364 aa8.39□□□□□ -1.07
UBE4B-202ENST00000343090 E2F7Q96AV8 911 aa8.39□□□□□ -1.07
UBE4B-202ENST00000343090 GPRASP2Q96D09 838 aa8.39□□□□□ -1.07
UBE4B-202ENST00000343090 NSL1Q96IY1 281 aa8.39□□□□□ -1.07
UBE4B-202ENST00000343090 MAGEB5Q9BZ81 275 aa8.39□□□□□ -1.07
UBE4B-202ENST00000343090 OSBPL7Q9BZF2 842 aa8.39□□□□□ -1.07
UBE4B-202ENST00000343090 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.39□□□□□ -1.071e-7■■■□□ 16.5
UBE4B-202ENST00000343090 AIPL1Q9NZN9 384 aa8.39□□□□□ -1.07
UBE4B-202ENST00000343090 A8MUI8 341 aa8.39□□□□□ -1.07
UBE4B-202ENST00000343090 PSTPIP1O43586 416 aa8.39□□□□□ -1.07
UBE4B-202ENST00000343090 PGK2P07205 417 aa8.39□□□□□ -1.07
UBE4B-202ENST00000343090 RARGP13631 454 aa8.39□□□□□ -1.07
UBE4B-202ENST00000343090 EPHB2P29323 1055 aa8.39□□□□□ -1.07
UBE4B-202ENST00000343090 CYP24A1Q07973 514 aa8.39□□□□□ -1.07
UBE4B-202ENST00000343090 BLMHQ13867 455 aa8.39□□□□□ -1.07
UBE4B-202ENST00000343090 TRIP10Q15642 601 aa8.39□□□□□ -1.07
UBE4B-202ENST00000343090 IMPG1Q17R60 797 aa8.39□□□□□ -1.07
UBE4B-202ENST00000343090 IER5Q5VY09 327 aa8.39□□□□□ -1.07
UBE4B-202ENST00000343090 IL31Q6EBC2 164 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms