RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 CCDC174Q6PII3 467 aa10.13□□□□□ -0.79
HOXA1-201ENST00000343060 SPOCD1Q6ZMY3 1216 aa10.13□□□□□ -0.79
HOXA1-201ENST00000343060 C15orf39Q6ZRI6 1047 aa10.13□□□□□ -0.79
HOXA1-201ENST00000343060 SPATA31D4Q6ZUB0 917 aa10.13□□□□□ -0.79
HOXA1-201ENST00000343060 RAPH1Q70E73 1250 aa10.13□□□□□ -0.79
HOXA1-201ENST00000343060 SV2AQ7L0J3 742 aa10.13□□□□□ -0.79
HOXA1-201ENST00000343060 MAP4K3Q8IVH8 894 aa10.13□□□□□ -0.79
HOXA1-201ENST00000343060 CERS5Q8N5B7 392 aa10.13□□□□□ -0.79
HOXA1-201ENST00000343060 LZICQ8WZA0 190 aa10.13□□□□□ -0.79
HOXA1-201ENST00000343060 CPT1BQ92523 772 aa10.13□□□□□ -0.79
HOXA1-201ENST00000343060 MRRFQ96E11 262 aaKnown RBP10.13□□□□□ -0.79
HOXA1-201ENST00000343060 ADAM33Q9BZ11 813 aa10.13□□□□□ -0.79
HOXA1-201ENST00000343060 POLLQ9UGP5 575 aa10.13□□□□□ -0.79
HOXA1-201ENST00000343060 CIDEBQ9UHD4 219 aa10.13□□□□□ -0.79
HOXA1-201ENST00000343060 IQANK1A0A1B0GTG1 560 aa10.12□□□□□ -0.79
HOXA1-201ENST00000343060 FAM237BA0A1B0GVD1 139 aa10.12□□□□□ -0.79
HOXA1-201ENST00000343060 C2orf71A6NGG8 1288 aa10.12□□□□□ -0.79
HOXA1-201ENST00000343060 BTBD19C9JJ37 291 aa10.12□□□□□ -0.79
HOXA1-201ENST00000343060 MT-ND3P03897 115 aa10.12□□□□□ -0.79
HOXA1-201ENST00000343060 KRT1P04264 644 aa10.12□□□□□ -0.79
HOXA1-201ENST00000343060 VIL1P09327 827 aaKnown RBP10.12□□□□□ -0.79
HOXA1-201ENST00000343060 SLURP2P0DP57 97 aa10.12□□□□□ -0.79
HOXA1-201ENST00000343060 ARP10275 920 aa10.12□□□□□ -0.79
HOXA1-201ENST00000343060 CPA2P48052 419 aa10.12□□□□□ -0.79
HOXA1-201ENST00000343060 CYP24A1Q07973 514 aa10.12□□□□□ -0.79
HOXA1-201ENST00000343060 ASPHQ12797 758 aa10.12□□□□□ -0.79
HOXA1-201ENST00000343060 MSLNQ13421 630 aaPredicted RBP10.12□□□□□ -0.79
HOXA1-201ENST00000343060 AOC3Q16853 763 aa10.12□□□□□ -0.79
HOXA1-201ENST00000343060 FNBP1LQ5T0N5 605 aa10.12□□□□□ -0.79
HOXA1-201ENST00000343060 ANKRD22Q5VYY1 191 aa10.12□□□□□ -0.79
HOXA1-201ENST00000343060 TATDN1Q6P1N9 297 aa10.12□□□□□ -0.79
HOXA1-201ENST00000343060 TMEM179Q6ZVK1 233 aa10.12□□□□□ -0.79
HOXA1-201ENST00000343060 DHDDSQ86SQ9 333 aa10.12□□□□□ -0.79
HOXA1-201ENST00000343060 SPATA24Q86W54 205 aa10.12□□□□□ -0.79
HOXA1-201ENST00000343060 PIP4K2CQ8TBX8 421 aa10.12□□□□□ -0.79
HOXA1-201ENST00000343060 SLC44A1Q8WWI5 657 aa10.12□□□□□ -0.79
HOXA1-201ENST00000343060 MTBPQ96DY7 904 aa10.12□□□□□ -0.79
HOXA1-201ENST00000343060 SERAC1Q96JX3 654 aa10.12□□□□□ -0.79
HOXA1-201ENST00000343060 FAM111AQ96PZ2 611 aa10.12□□□□□ -0.79
HOXA1-201ENST00000343060 C11orf70Q9BRQ4 267 aa10.12□□□□□ -0.79
HOXA1-201ENST00000343060 CCDC106Q9BWC9 280 aa10.12□□□□□ -0.79
HOXA1-201ENST00000343060 WWP1Q9H0M0 922 aa10.12□□□□□ -0.79
HOXA1-201ENST00000343060 S100A14Q9HCY8 104 aa10.12□□□□□ -0.79
HOXA1-201ENST00000343060 MKS1Q9NXB0 559 aa10.12□□□□□ -0.79
HOXA1-201ENST00000343060 PTTG2Q9NZH5 202 aa10.12□□□□□ -0.79
HOXA1-201ENST00000343060 IP6K2Q9UHH9 426 aa10.12□□□□□ -0.79
HOXA1-201ENST00000343060 EXOC7Q9UPT5 735 aa10.12□□□□□ -0.79
HOXA1-201ENST00000343060 SH3BP1Q9Y3L3 701 aa10.12□□□□□ -0.79
HOXA1-201ENST00000343060 GOLGA8RI6L899 631 aa10.12□□□□□ -0.79
HOXA1-201ENST00000343060 RAD21O60216 631 aa10.12□□□□□ -0.79
HOXA1-201ENST00000343060 USP1O94782 785 aa10.12□□□□□ -0.79
HOXA1-201ENST00000343060 ENO1P06733 434 aaKnown RBP10.12□□□□□ -0.79
HOXA1-201ENST00000343060 HARSP12081 509 aaKnown RBP10.12□□□□□ -0.79
HOXA1-201ENST00000343060 UQCRBP14927 111 aa10.12□□□□□ -0.79
HOXA1-201ENST00000343060 CPOXP36551 454 aa10.12□□□□□ -0.79
HOXA1-201ENST00000343060 CLCN2P51788 898 aa10.12□□□□□ -0.79
HOXA1-201ENST00000343060 GTF2IP78347 998 aa10.12□□□□□ -0.79
HOXA1-201ENST00000343060 GAD2Q05329 585 aa10.12□□□□□ -0.79
HOXA1-201ENST00000343060 TEX44Q53QW1 395 aa10.12□□□□□ -0.79
HOXA1-201ENST00000343060 HHIPL2Q6UWX4 724 aa10.12□□□□□ -0.79
HOXA1-201ENST00000343060 C3orf62Q6ZUJ4 267 aa10.12□□□□□ -0.79
HOXA1-201ENST00000343060 NCAPG2Q86XI2 1143 aa10.12□□□□□ -0.79
HOXA1-201ENST00000343060 TRIM42Q8IWZ5 723 aa10.12□□□□□ -0.79
HOXA1-201ENST00000343060 FEZF2Q8TBJ5 459 aa10.12□□□□□ -0.79
HOXA1-201ENST00000343060 CCDC127Q96BQ5 260 aa10.12□□□□□ -0.79
HOXA1-201ENST00000343060 KLF6Q99612 283 aaPredicted RBP10.12□□□□□ -0.79
HOXA1-201ENST00000343060 FRMD8P1Q9BZ68 369 aaPredicted RBP10.12□□□□□ -0.79
HOXA1-201ENST00000343060 EHMT1Q9H9B1 1298 aa10.12□□□□□ -0.79
HOXA1-201ENST00000343060 ALG13Q9NP73 1137 aaKnown RBP10.12□□□□□ -0.79
HOXA1-201ENST00000343060 KLHL11Q9NVR0 708 aa10.12□□□□□ -0.79
HOXA1-201ENST00000343060 SYNPO2Q9UMS6 1093 aa10.12□□□□□ -0.79
HOXA1-201ENST00000343060 PI4K2BG5E9Z4 385 aa10.11□□□□□ -0.79
HOXA1-201ENST00000343060 TLR3O15455 904 aaKnown RBP10.11□□□□□ -0.79
HOXA1-201ENST00000343060 ZSCAN9O15535 394 aaPredicted RBP10.11□□□□□ -0.79
HOXA1-201ENST00000343060 CCNT2O60583 730 aaKnown RBP10.11□□□□□ -0.79
HOXA1-201ENST00000343060 P4HBP07237 508 aaKnown RBP10.11□□□□□ -0.79
HOXA1-201ENST00000343060 GJC1P36383 396 aa10.11□□□□□ -0.79
HOXA1-201ENST00000343060 RGS2P41220 211 aa10.11□□□□□ -0.79
HOXA1-201ENST00000343060 CDKN2BP42772 138 aa10.11□□□□□ -0.79
HOXA1-201ENST00000343060 KCNQ4P56696 695 aa10.11□□□□□ -0.79
HOXA1-201ENST00000343060 ZNF252P-AS1Q0IIN9 211 aa10.11□□□□□ -0.79
HOXA1-201ENST00000343060 NFIAQ12857 509 aa10.11□□□□□ -0.79
HOXA1-201ENST00000343060 C2CD6Q53TS8 623 aa10.11□□□□□ -0.79
HOXA1-201ENST00000343060 C1orf146Q5VVC0 180 aa10.11□□□□□ -0.79
HOXA1-201ENST00000343060 ARMC3Q5W041 872 aa10.11□□□□□ -0.79
HOXA1-201ENST00000343060 KAZNQ674X7 775 aa10.11□□□□□ -0.79
HOXA1-201ENST00000343060 APOBEC3HQ6NTF7 200 aaKnown RBP10.11□□□□□ -0.79
HOXA1-201ENST00000343060 USP37Q86T82 979 aa10.11□□□□□ -0.79
HOXA1-201ENST00000343060 TRIM74Q86UV6 250 aa10.11□□□□□ -0.79
HOXA1-201ENST00000343060 TRIM73Q86UV7 250 aa10.11□□□□□ -0.79
HOXA1-201ENST00000343060 ABRAQ8N0Z2 381 aa10.11□□□□□ -0.79
HOXA1-201ENST00000343060 FBXO36Q8NEA4 188 aa10.11□□□□□ -0.79
HOXA1-201ENST00000343060 RAB3IL1Q8TBN0 382 aa10.11□□□□□ -0.79
HOXA1-201ENST00000343060 IRGQQ8WZA9 623 aa10.11□□□□□ -0.79
HOXA1-201ENST00000343060 HIC2Q96JB3 615 aa10.11□□□□□ -0.79
HOXA1-201ENST00000343060 CLPTM1LQ96KA5 538 aa10.11□□□□□ -0.79
HOXA1-201ENST00000343060 CYTH2Q99418 400 aa10.11□□□□□ -0.79
HOXA1-201ENST00000343060 SENP7Q9BQF6 1050 aa10.11□□□□□ -0.79
HOXA1-201ENST00000343060 PREBQ9HCU5 417 aa10.11□□□□□ -0.79
HOXA1-201ENST00000343060 C1orf112Q9NSG2 853 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms