RNA–Protein interactions for RNA: ENST00000340677.9

CDK11B-201, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-201ENST00000340677 MARCKSP29966 332 aaPredicted RBP17.72■□□□□ 0.43
CDK11B-201ENST00000340677 PARP6Q2NL67 630 aa17.72■□□□□ 0.43
CDK11B-201ENST00000340677 HSP90AA4PQ58FG1 418 aa17.72■□□□□ 0.43
CDK11B-201ENST00000340677 NIPAL1Q6NVV3 410 aa17.72■□□□□ 0.43
CDK11B-201ENST00000340677 SH3GLB2Q9NR46 395 aa17.72■□□□□ 0.43
CDK11B-201ENST00000340677 MAD2L2Q9UI95 211 aa17.72■□□□□ 0.43
CDK11B-201ENST00000340677 CLEC11AQ9Y240 323 aa17.72■□□□□ 0.43
CDK11B-201ENST00000340677 DDTLA6NHG4 134 aaPredicted RBP17.71■□□□□ 0.43
CDK11B-201ENST00000340677 ALOX15BO15296 676 aa17.71■□□□□ 0.43
CDK11B-201ENST00000340677 CUL1Q13616 776 aa17.71■□□□□ 0.43
CDK11B-201ENST00000340677 CCDC6Q16204 474 aa17.71■□□□□ 0.43
CDK11B-201ENST00000340677 PKN2Q16513 984 aaKnown RBP17.71■□□□□ 0.43
CDK11B-201ENST00000340677 RTL10Q7L3V2 364 aa17.71■□□□□ 0.43
CDK11B-201ENST00000340677 TICAM1Q8IUC6 712 aa17.71■□□□□ 0.43
CDK11B-201ENST00000340677 ZFPM1Q8IX07 1006 aa17.71■□□□□ 0.43
CDK11B-201ENST00000340677 ELMOD2Q8IZ81 293 aa17.71■□□□□ 0.43
CDK11B-201ENST00000340677 DHX38Q92620 1227 aaKnown RBP17.71■□□□□ 0.43
CDK11B-201ENST00000340677 SECISBP2Q96T21 854 aaKnown RBP17.71■□□□□ 0.43
CDK11B-201ENST00000340677 CASS4Q9NQ75 786 aa17.71■□□□□ 0.43
CDK11B-201ENST00000340677 POU2F3Q9UKI9 436 aa17.71■□□□□ 0.43
CDK11B-201ENST00000340677 A0A1W2PQ27 194 aa17.71■□□□□ 0.43
CDK11B-201ENST00000340677 A0A1W2PQ64 194 aa17.71■□□□□ 0.43
CDK11B-201ENST00000340677 A0A1W2PQD8 194 aa17.71■□□□□ 0.43
CDK11B-201ENST00000340677 SOBPA7XYQ1 873 aa17.71■□□□□ 0.43
CDK11B-201ENST00000340677 TTLL1O95922 423 aa17.71■□□□□ 0.43
CDK11B-201ENST00000340677 SLC4A1P02730 911 aa17.71■□□□□ 0.43
CDK11B-201ENST00000340677 CCNB1P14635 433 aa17.71■□□□□ 0.43
CDK11B-201ENST00000340677 AKR1B1P15121 316 aa17.71■□□□□ 0.43
CDK11B-201ENST00000340677 PFKFB1P16118 471 aa17.71■□□□□ 0.43
CDK11B-201ENST00000340677 PRKCAP17252 672 aa17.71■□□□□ 0.43
CDK11B-201ENST00000340677 ECE1P42892 770 aa17.71■□□□□ 0.43
CDK11B-201ENST00000340677 NEK3P51956 506 aa17.71■□□□□ 0.43
CDK11B-201ENST00000340677 IFITM2Q01629 132 aa17.71■□□□□ 0.43
CDK11B-201ENST00000340677 MAPRE2Q15555 327 aa17.71■□□□□ 0.43
CDK11B-201ENST00000340677 TMEM63BQ5T3F8 832 aa17.71■□□□□ 0.43
CDK11B-201ENST00000340677 ZNF184Q99676 751 aaPredicted RBP17.71■□□□□ 0.43
CDK11B-201ENST00000340677 ETNK1Q9HBU6 452 aa17.71■□□□□ 0.43
CDK11B-201ENST00000340677 CAPN6Q9Y6Q1 641 aa17.71■□□□□ 0.43
CDK11B-201ENST00000340677 IQANK1A0A1B0GTG1 560 aa17.7■□□□□ 0.42
CDK11B-201ENST00000340677 TMEM238LA0A1B0GVL6 79 aa17.7■□□□□ 0.42
CDK11B-201ENST00000340677 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.7■□□□□ 0.42
CDK11B-201ENST00000340677 ADCY6O43306 1168 aa17.7■□□□□ 0.42
CDK11B-201ENST00000340677 PRMT3O60678 531 aa17.7■□□□□ 0.42
CDK11B-201ENST00000340677 ATP1A1P05023 1023 aaKnown RBP17.7■□□□□ 0.42
CDK11B-201ENST00000340677 SNHG28P0DPA3 235 aa17.7■□□□□ 0.42
CDK11B-201ENST00000340677 STK4Q13043 487 aa17.7■□□□□ 0.42
CDK11B-201ENST00000340677 C16orf72Q14CZ0 275 aa17.7■□□□□ 0.42
CDK11B-201ENST00000340677 PFKFB3Q16875 520 aaPredicted RBP17.7■□□□□ 0.42
CDK11B-201ENST00000340677 DCAF6Q58WW2 860 aa17.7■□□□□ 0.42
CDK11B-201ENST00000340677 WASHC2DQ5SRD0 308 aa17.7■□□□□ 0.42
CDK11B-201ENST00000340677 KBTBD2Q8IY47 623 aa17.7■□□□□ 0.42
CDK11B-201ENST00000340677 SYTL1Q8IYJ3 562 aa17.7■□□□□ 0.42
CDK11B-201ENST00000340677 CCNYL1Q8N7R7 359 aa17.7■□□□□ 0.42
CDK11B-201ENST00000340677 ZNF784Q8NCA9 323 aaPredicted RBP17.7■□□□□ 0.42
CDK11B-201ENST00000340677 DACT3Q96B18 629 aaPredicted RBP17.7■□□□□ 0.42
CDK11B-201ENST00000340677 HEMGNQ9BXL5 484 aa17.7■□□□□ 0.42
CDK11B-201ENST00000340677 UVRAGQ9P2Y5 699 aa17.7■□□□□ 0.42
CDK11B-201ENST00000340677 TCEAL9Q9UHQ7 104 aa17.7■□□□□ 0.42
CDK11B-201ENST00000340677 UTP11Q9Y3A2 253 aaKnown RBP17.7■□□□□ 0.42
CDK11B-201ENST00000340677 ARHGAP10A1A4S6 786 aa17.7■□□□□ 0.42
CDK11B-201ENST00000340677 ENTPD5O75356 428 aa17.7■□□□□ 0.42
CDK11B-201ENST00000340677 CAPN1P07384 714 aa17.7■□□□□ 0.42
CDK11B-201ENST00000340677 ATF6P18850 670 aa17.7■□□□□ 0.42
CDK11B-201ENST00000340677 CXCR2P25025 360 aa17.7■□□□□ 0.42
CDK11B-201ENST00000340677 NUBP1P53384 320 aa17.7■□□□□ 0.42
CDK11B-201ENST00000340677 GPR85P60893 370 aa17.7■□□□□ 0.42
CDK11B-201ENST00000340677 HEATR4Q86WZ0 1026 aa17.7■□□□□ 0.42
CDK11B-201ENST00000340677 DEPDC4Q8N2C3 294 aa17.7■□□□□ 0.42
CDK11B-201ENST00000340677 MMGT1Q8N4V1 131 aa17.7■□□□□ 0.42
CDK11B-201ENST00000340677 MREGQ8N565 214 aa17.7■□□□□ 0.42
CDK11B-201ENST00000340677 CFAP61Q8NHU2 1237 aa17.7■□□□□ 0.42
CDK11B-201ENST00000340677 NRBF2Q96F24 287 aa17.7■□□□□ 0.42
CDK11B-201ENST00000340677 NLRP4Q96MN2 994 aa17.7■□□□□ 0.42
CDK11B-201ENST00000340677 TSG101Q99816 390 aa17.7■□□□□ 0.42
CDK11B-201ENST00000340677 PHF20Q9BVI0 1012 aa17.7■□□□□ 0.42
CDK11B-201ENST00000340677 EMC3Q9P0I2 261 aa17.7■□□□□ 0.42
CDK11B-201ENST00000340677 V9GY48 417 aaPredicted RBP17.7■□□□□ 0.42
CDK11B-201ENST00000340677 PCM1Q15154 2024 aa17.7■□□□□ 0.42
CDK11B-201ENST00000340677 K7EPI3 171 aa17.69■□□□□ 0.42
CDK11B-201ENST00000340677 CTNND1O60716 968 aaKnown RBP17.69■□□□□ 0.42
CDK11B-201ENST00000340677 OPHN1O60890 802 aa17.69■□□□□ 0.42
CDK11B-201ENST00000340677 SNRPAP09012 282 aaKnown RBP17.69■□□□□ 0.42
CDK11B-201ENST00000340677 ZNF3P17036 446 aa17.69■□□□□ 0.42
CDK11B-201ENST00000340677 TNFRSF8P28908 595 aa17.69■□□□□ 0.42
CDK11B-201ENST00000340677 ASPRV1Q53RT3 343 aa17.69■□□□□ 0.42
CDK11B-201ENST00000340677 LRRC74BQ6ZQY2 392 aa17.69■□□□□ 0.42
CDK11B-201ENST00000340677 HS2ST1Q7LGA3 356 aa17.69■□□□□ 0.42
CDK11B-201ENST00000340677 KCTD20Q7Z5Y7 419 aa17.69■□□□□ 0.42
CDK11B-201ENST00000340677 RBM18Q96H35 190 aaKnown RBP17.69■□□□□ 0.42
CDK11B-201ENST00000340677 USB1Q9BQ65 265 aaKnown RBP17.69■□□□□ 0.42
CDK11B-201ENST00000340677 NYAP2Q9P242 653 aa17.69■□□□□ 0.42
CDK11B-201ENST00000340677 AP3M1Q9Y2T2 418 aa17.69■□□□□ 0.42
CDK11B-201ENST00000340677 GCOM1H8Y6P7 765 aaPredicted RBP17.69■□□□□ 0.42
CDK11B-201ENST00000340677 XPO1O14980 1071 aaKnown RBP17.69■□□□□ 0.42
CDK11B-201ENST00000340677 GPC4O75487 556 aa17.69■□□□□ 0.42
CDK11B-201ENST00000340677 KRT6AP02538 564 aa17.69■□□□□ 0.42
CDK11B-201ENST00000340677 KRT6BP04259 564 aa17.69■□□□□ 0.42
CDK11B-201ENST00000340677 FAM153BP0C7A2 387 aa17.69■□□□□ 0.42
CDK11B-201ENST00000340677 MYZAPP0CAP1 466 aa17.69■□□□□ 0.42
CDK11B-201ENST00000340677 CRABP2P29373 138 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms