RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 HAUS5O94927 633 aa15.1■□□□□ 0.01
CPSF7-201ENST00000340437 INHBAP08476 426 aa15.1■□□□□ 0.01
CPSF7-201ENST00000340437 PYGBP11216 843 aa15.1■□□□□ 0.01
CPSF7-201ENST00000340437 MMP8P22894 467 aa15.1■□□□□ 0.01
CPSF7-201ENST00000340437 RASSF2P50749 326 aa15.1■□□□□ 0.01
CPSF7-201ENST00000340437 EIF3EP60228 445 aaKnown RBP15.1■□□□□ 0.01
CPSF7-201ENST00000340437 MORF4L2Q15014 288 aa15.1■□□□□ 0.01
CPSF7-201ENST00000340437 STYK1Q6J9G0 422 aa15.1■□□□□ 0.01
CPSF7-201ENST00000340437 DSTYKQ6XUX3 929 aa15.1■□□□□ 0.01
CPSF7-201ENST00000340437 SLC7A6OSQ96CW6 309 aaPredicted RBP15.1■□□□□ 0.01
CPSF7-201ENST00000340437 MECRQ9BV79 373 aa15.1■□□□□ 0.01
CPSF7-201ENST00000340437 TSSK1BQ9BXA7 367 aa15.1■□□□□ 0.01
CPSF7-201ENST00000340437 ZNF395Q9H8N7 513 aaPredicted RBP15.1■□□□□ 0.01
CPSF7-201ENST00000340437 GREB1LQ9C091 1923 aaPredicted RBP15.1■□□□□ 0.01
CPSF7-201ENST00000340437 ZC3H11AO75152 810 aaKnown RBP eCLIP15.1■□□□□ 0.019e-7■■■□□ 16.7
CPSF7-201ENST00000340437 PEX11AO75192 247 aa15.1■□□□□ 0.01
CPSF7-201ENST00000340437 CCNB1P14635 433 aa15.1■□□□□ 0.01
CPSF7-201ENST00000340437 CALB2P22676 271 aa15.1■□□□□ 0.01
CPSF7-201ENST00000340437 IL1R2P27930 398 aa15.1■□□□□ 0.01
CPSF7-201ENST00000340437 PTDSS1P48651 473 aaKnown RBP15.1■□□□□ 0.01
CPSF7-201ENST00000340437 CNTN2Q02246 1040 aa15.1■□□□□ 0.01
CPSF7-201ENST00000340437 KHDC1Q4VXA5 237 aaKnown RBP15.1■□□□□ 0.01
CPSF7-201ENST00000340437 TRIM72Q6ZMU5 477 aa15.1■□□□□ 0.01
CPSF7-201ENST00000340437 CEP120Q8N960 986 aa15.1■□□□□ 0.01
CPSF7-201ENST00000340437 ATP11CQ8NB49 1132 aa15.1■□□□□ 0.01
CPSF7-201ENST00000340437 DENND1AQ8TEH3 1009 aa15.1■□□□□ 0.01
CPSF7-201ENST00000340437 C10orf82Q8WW14 230 aa15.1■□□□□ 0.01
CPSF7-201ENST00000340437 NTPCRQ9BSD7 190 aaKnown RBP15.1■□□□□ 0.01
CPSF7-201ENST00000340437 TRIM55Q9BYV6 548 aa15.1■□□□□ 0.01
CPSF7-201ENST00000340437 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.1■□□□□ 0.01
CPSF7-201ENST00000340437 ARHGAP28Q9P2N2 729 aa15.1■□□□□ 0.01
CPSF7-201ENST00000340437 CLUHO75153 1309 aa15.1■□□□□ 0.01
CPSF7-201ENST00000340437 ALOX15BO15296 676 aa15.1■□□□□ 0.01
CPSF7-201ENST00000340437 TCEA3O75764 348 aa15.1■□□□□ 0.01
CPSF7-201ENST00000340437 RBP3P10745 1247 aa15.1■□□□□ 0.01
CPSF7-201ENST00000340437 ELK3P41970 407 aa15.1■□□□□ 0.01
CPSF7-201ENST00000340437 ABL2P42684 1182 aa15.1■□□□□ 0.01
CPSF7-201ENST00000340437 YARSP54577 528 aaKnown RBP15.1■□□□□ 0.01
CPSF7-201ENST00000340437 C1QBPQ07021 282 aaKnown RBP15.1■□□□□ 0.01
CPSF7-201ENST00000340437 FAAP100Q0VG06 881 aa15.1■□□□□ 0.01
CPSF7-201ENST00000340437 PTK7Q13308 1070 aa15.1■□□□□ 0.01
CPSF7-201ENST00000340437 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.1■□□□□ 0.01
CPSF7-201ENST00000340437 PHF13Q86YI8 300 aaPredicted RBP15.1■□□□□ 0.01
CPSF7-201ENST00000340437 STK32AQ8WU08 396 aa15.1■□□□□ 0.01
CPSF7-201ENST00000340437 CPT1BQ92523 772 aa15.1■□□□□ 0.01
CPSF7-201ENST00000340437 RABGEF1Q9UJ41 708 aa15.1■□□□□ 0.01
CPSF7-201ENST00000340437 CALB1P05937 261 aa15.09■□□□□ 0.01
CPSF7-201ENST00000340437 ESRRAP11474 423 aaPredicted RBP15.09■□□□□ 0.01
CPSF7-201ENST00000340437 KCNA2P16389 499 aa15.09■□□□□ 0.01
CPSF7-201ENST00000340437 MOGSQ13724 837 aa15.09■□□□□ 0.01
CPSF7-201ENST00000340437 BMPR2Q13873 1038 aa15.09■□□□□ 0.01
CPSF7-201ENST00000340437 RCN1Q15293 331 aa15.09■□□□□ 0.01
CPSF7-201ENST00000340437 ZNF699Q32M78 642 aa15.09■□□□□ 0.01
CPSF7-201ENST00000340437 XKR3Q5GH77 459 aa15.09■□□□□ 0.01
CPSF7-201ENST00000340437 NBPF12Q5TAG4 269 aaPredicted RBP15.09■□□□□ 0.01
CPSF7-201ENST00000340437 UBA3Q8TBC4 463 aa15.09■□□□□ 0.01
CPSF7-201ENST00000340437 NLRP4Q96MN2 994 aa15.09■□□□□ 0.01
CPSF7-201ENST00000340437 ZNF408Q9H9D4 720 aa15.09■□□□□ 0.01
CPSF7-201ENST00000340437 GPATCH2LQ9NWQ4 482 aa15.09■□□□□ 0.01
CPSF7-201ENST00000340437 MAD1L1Q9Y6D9 718 aa15.09■□□□□ 0.01
CPSF7-201ENST00000340437 FAM237BA0A1B0GVD1 139 aa15.09■□□□□ 0.01
CPSF7-201ENST00000340437 TMEM63AO94886 807 aa15.09■□□□□ 0.01
CPSF7-201ENST00000340437 ALADP13716 330 aa15.09■□□□□ 0.01
CPSF7-201ENST00000340437 CDKN2BP42772 138 aa15.09■□□□□ 0.01
CPSF7-201ENST00000340437 SLC8A3P57103 927 aa15.09■□□□□ 0.01
CPSF7-201ENST00000340437 KDSRQ06136 332 aa15.09■□□□□ 0.01
CPSF7-201ENST00000340437 PTP4A2Q12974 167 aa15.09■□□□□ 0.01
CPSF7-201ENST00000340437 RAB6CQ53S08 254 aa15.09■□□□□ 0.01
CPSF7-201ENST00000340437 IGDCC3Q8IVU1 814 aa15.09■□□□□ 0.01
CPSF7-201ENST00000340437 RIBC1Q8N443 379 aaPredicted RBP15.09■□□□□ 0.01
CPSF7-201ENST00000340437 PDCD7Q8N8D1 485 aaKnown RBP15.09■□□□□ 0.01
CPSF7-201ENST00000340437 SPATA18Q8TC71 538 aa15.09■□□□□ 0.01
CPSF7-201ENST00000340437 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.09■□□□□ 0.01
CPSF7-201ENST00000340437 FAXDC2Q96IV6 333 aa15.09■□□□□ 0.01
CPSF7-201ENST00000340437 CYTH2Q99418 400 aa15.09■□□□□ 0.01
CPSF7-201ENST00000340437 TRIM56Q9BRZ2 755 aaKnown RBP15.09■□□□□ 0.01
CPSF7-201ENST00000340437 RAB6CQ9H0N0 254 aa15.09■□□□□ 0.01
CPSF7-201ENST00000340437 LRMDAQ9H2I8 198 aa15.09■□□□□ 0.01
CPSF7-201ENST00000340437 CYP39A1Q9NYL5 469 aa15.09■□□□□ 0.01
CPSF7-201ENST00000340437 KRT36O76013 467 aa15.08■□□□□ 0.01
CPSF7-201ENST00000340437 TBXAS1P24557 533 aaPredicted RBP15.08■□□□□ 0.01
CPSF7-201ENST00000340437 KPNB1Q14974 876 aaKnown RBP15.08■□□□□ 0.01
CPSF7-201ENST00000340437 KBTBD12Q3ZCT8 623 aa15.08■□□□□ 0.01
CPSF7-201ENST00000340437 SH3PXD2AQ5TCZ1 1133 aa15.08■□□□□ 0.01
CPSF7-201ENST00000340437 DLK2Q6UY11 383 aa15.08■□□□□ 0.01
CPSF7-201ENST00000340437 C15orf39Q6ZRI6 1047 aa15.08■□□□□ 0.01
CPSF7-201ENST00000340437 TRIM50Q86XT4 487 aa15.08■□□□□ 0.01
CPSF7-201ENST00000340437 TMEM120AQ9BXJ8 343 aa15.08■□□□□ 0.01
CPSF7-201ENST00000340437 ACTL7BQ9Y614 415 aa15.08■□□□□ 0.01
CPSF7-201ENST00000340437 E2F8A0AVK6 867 aa15.08■□□□□ 0
CPSF7-201ENST00000340437 INO80B-WBP1J3KQ70 363 aa15.08■□□□□ 0
CPSF7-201ENST00000340437 BAG2O95816 211 aa15.08■□□□□ 0
CPSF7-201ENST00000340437 ENO1P06733 434 aaKnown RBP15.08■□□□□ 0
CPSF7-201ENST00000340437 CXCL9Q07325 125 aa15.08■□□□□ 0
CPSF7-201ENST00000340437 BSPRYQ5W0U4 402 aa15.08■□□□□ 0
CPSF7-201ENST00000340437 CEP128Q6ZU80 1094 aa15.08■□□□□ 0
CPSF7-201ENST00000340437 CLNKQ7Z7G1 428 aa15.08■□□□□ 0
CPSF7-201ENST00000340437 LMNTD2Q8IXW0 634 aa15.08■□□□□ 0
CPSF7-201ENST00000340437 PPIL6Q8IXY8 311 aa15.08■□□□□ 0
CPSF7-201ENST00000340437 PRPF31Q8WWY3 499 aaKnown RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms