RNA–Protein interactions for RNA: ENST00000339350.7

DFFB-202, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 3,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-202ENST00000339350 PTPN4P29074 926 aa13.2□□□□□ -0.3
DFFB-202ENST00000339350 CHKAP35790 457 aa13.2□□□□□ -0.3
DFFB-202ENST00000339350 ECE1P42892 770 aa13.2□□□□□ -0.3
DFFB-202ENST00000339350 PFKPQ01813 784 aa13.2□□□□□ -0.3
DFFB-202ENST00000339350 LPIN1Q14693 890 aa13.2□□□□□ -0.3
DFFB-202ENST00000339350 LLGL2Q6P1M3 1020 aa13.2□□□□□ -0.3
DFFB-202ENST00000339350 OTOP1Q7RTM1 612 aa13.2□□□□□ -0.3
DFFB-202ENST00000339350 SLC47A2Q86VL8 602 aa13.2□□□□□ -0.3
DFFB-202ENST00000339350 PPM1KQ8N3J5 372 aa13.2□□□□□ -0.3
DFFB-202ENST00000339350 UBL4BQ8N7F7 174 aa13.2□□□□□ -0.3
DFFB-202ENST00000339350 CKAP2Q8WWK9 683 aa13.2□□□□□ -0.3
DFFB-202ENST00000339350 HSD17B14Q9BPX1 270 aa13.2□□□□□ -0.3
DFFB-202ENST00000339350 MTRF1LQ9UGC7 380 aaKnown RBP13.2□□□□□ -0.3
DFFB-202ENST00000339350 TTC7AQ9ULT0 858 aaPredicted RBP13.2□□□□□ -0.3
DFFB-202ENST00000339350 LINC00854A0A1B0GVQ3 168 aa13.2□□□□□ -0.3
DFFB-202ENST00000339350 GTPBP10A4D1E9 387 aaKnown RBP13.2□□□□□ -0.3
DFFB-202ENST00000339350 MTRF1O75570 445 aaKnown RBP13.2□□□□□ -0.3
DFFB-202ENST00000339350 ZBED1O96006 694 aa13.2□□□□□ -0.3
DFFB-202ENST00000339350 GH2P01242 217 aa13.2□□□□□ -0.3
DFFB-202ENST00000339350 ARP10275 920 aa13.2□□□□□ -0.3
DFFB-202ENST00000339350 EIF2B2P49770 351 aaKnown RBP13.2□□□□□ -0.3
DFFB-202ENST00000339350 DHX34Q14147 1143 aaKnown RBP13.2□□□□□ -0.3
DFFB-202ENST00000339350 VASH1Q7L8A9 365 aaPredicted RBP13.2□□□□□ -0.3
DFFB-202ENST00000339350 STARD8Q92502 1023 aa13.2□□□□□ -0.3
DFFB-202ENST00000339350 USP6NLQ92738 828 aa13.2□□□□□ -0.3
DFFB-202ENST00000339350 FAM20AQ96MK3 541 aa13.2□□□□□ -0.3
DFFB-202ENST00000339350 CYTH2Q99418 400 aa13.2□□□□□ -0.3
DFFB-202ENST00000339350 PITPNM3Q9BZ71 974 aa13.2□□□□□ -0.3
DFFB-202ENST00000339350 RPL26L1Q9UNX3 145 aaKnown RBP13.2□□□□□ -0.3
DFFB-202ENST00000339350 FOCADQ5VW36 1801 aa13.19□□□□□ -0.3
DFFB-202ENST00000339350 PFASO15067 1338 aa13.19□□□□□ -0.3
DFFB-202ENST00000339350 FRMPD4Q14CM0 1322 aa13.19□□□□□ -0.3
DFFB-202ENST00000339350 IGLV3-22A0A075B6J6 115 aa13.19□□□□□ -0.3
DFFB-202ENST00000339350 FAM187AA6NFU0 413 aa13.19□□□□□ -0.3
DFFB-202ENST00000339350 TCP10L2B9ZVM9 353 aa13.19□□□□□ -0.3
DFFB-202ENST00000339350 GAS7O60861 476 aa13.19□□□□□ -0.3
DFFB-202ENST00000339350 CBFA2T3O75081 653 aa13.19□□□□□ -0.3
DFFB-202ENST00000339350 EIF2B5Q13144 721 aaKnown RBP13.19□□□□□ -0.3
DFFB-202ENST00000339350 ACVR2BQ13705 512 aa13.19□□□□□ -0.3
DFFB-202ENST00000339350 MTFR1Q15390 333 aa13.19□□□□□ -0.3
DFFB-202ENST00000339350 NOP9Q86U38 636 aaKnown RBP13.19□□□□□ -0.3
DFFB-202ENST00000339350 TTC39CQ8N584 583 aa13.19□□□□□ -0.3
DFFB-202ENST00000339350 MORC4Q8TE76 937 aa13.19□□□□□ -0.3
DFFB-202ENST00000339350 CDC42EP4Q9H3Q1 356 aaKnown RBP13.19□□□□□ -0.3
DFFB-202ENST00000339350 FAM198AQ9UFP1 575 aa13.19□□□□□ -0.3
DFFB-202ENST00000339350 MTUS1Q9ULD2 1270 aa13.19□□□□□ -0.3
DFFB-202ENST00000339350 SYNGAP1Q96PV0 1343 aa13.19□□□□□ -0.3
DFFB-202ENST00000339350 A0A1W2PRG0 241 aa13.19□□□□□ -0.3
DFFB-202ENST00000339350 HSPA1AP0DMV8 641 aaKnown RBP13.19□□□□□ -0.3
DFFB-202ENST00000339350 HSPA1BP0DMV9 641 aaKnown RBP13.19□□□□□ -0.3
DFFB-202ENST00000339350 SSTR3P32745 418 aaPredicted RBP13.19□□□□□ -0.3
DFFB-202ENST00000339350 CDC16Q13042 620 aa13.19□□□□□ -0.3
DFFB-202ENST00000339350 THOC5Q13769 683 aaKnown RBP13.19□□□□□ -0.3
DFFB-202ENST00000339350 PDE1CQ14123 709 aaPredicted RBP13.19□□□□□ -0.3
DFFB-202ENST00000339350 ACAP1Q15027 740 aa13.19□□□□□ -0.3
DFFB-202ENST00000339350 RSPH3Q86UC2 560 aa13.19□□□□□ -0.3
DFFB-202ENST00000339350 LRRC49Q8IUZ0 686 aa13.19□□□□□ -0.3
DFFB-202ENST00000339350 MASTLQ96GX5 879 aa13.19□□□□□ -0.3
DFFB-202ENST00000339350 ASIC3Q9UHC3 531 aa13.19□□□□□ -0.3
DFFB-202ENST00000339350 SH3PXD2BA1X283 911 aa13.18□□□□□ -0.3
DFFB-202ENST00000339350 TBKBP1A7MCY6 615 aa13.18□□□□□ -0.3
DFFB-202ENST00000339350 TBC1D12O60347 775 aa13.18□□□□□ -0.3
DFFB-202ENST00000339350 DNAJC6O75061 913 aa13.18□□□□□ -0.3
DFFB-202ENST00000339350 GAP43P17677 238 aa13.18□□□□□ -0.3
DFFB-202ENST00000339350 CHRNA3P32297 505 aa13.18□□□□□ -0.3
DFFB-202ENST00000339350 STX2P32856 288 aa13.18□□□□□ -0.3
DFFB-202ENST00000339350 RCVRNP35243 200 aa13.18□□□□□ -0.3
DFFB-202ENST00000339350 COILP38432 576 aaPredicted RBP13.18□□□□□ -0.3
DFFB-202ENST00000339350 GPC5P78333 572 aa13.18□□□□□ -0.3
DFFB-202ENST00000339350 LMNB2Q03252 620 aa13.18□□□□□ -0.3
DFFB-202ENST00000339350 BTKQ06187 659 aa13.18□□□□□ -0.3
DFFB-202ENST00000339350 CD300CQ08708 224 aa13.18□□□□□ -0.3
DFFB-202ENST00000339350 RRP1BQ14684 758 aaKnown RBP13.18□□□□□ -0.3
DFFB-202ENST00000339350 TGFBIQ15582 683 aa13.18□□□□□ -0.3
DFFB-202ENST00000339350 KYNUQ16719 465 aa13.18□□□□□ -0.3
DFFB-202ENST00000339350 TAF1BQ53T94 588 aaPredicted RBP13.18□□□□□ -0.3
DFFB-202ENST00000339350 PPP1R2P3Q6NXS1 205 aa13.18□□□□□ -0.3
DFFB-202ENST00000339350 RNF207Q6ZRF8 634 aa13.18□□□□□ -0.3
DFFB-202ENST00000339350 LMO3Q8TAP4 145 aa13.18□□□□□ -0.3
DFFB-202ENST00000339350 DHX38Q92620 1227 aaKnown RBP13.18□□□□□ -0.3
DFFB-202ENST00000339350 AKT1S1Q96B36 256 aa13.18□□□□□ -0.3
DFFB-202ENST00000339350 NDUFA13Q9P0J0 144 aa13.18□□□□□ -0.3
DFFB-202ENST00000339350 FUOMA2VDF0 154 aa13.18□□□□□ -0.3
DFFB-202ENST00000339350 KLRG2A4D1S0 409 aaPredicted RBP13.18□□□□□ -0.3
DFFB-202ENST00000339350 TBX3O15119 743 aa13.18□□□□□ -0.3
DFFB-202ENST00000339350 MAPK13O15264 365 aa13.18□□□□□ -0.3
DFFB-202ENST00000339350 GJC1P36383 396 aa13.18□□□□□ -0.3
DFFB-202ENST00000339350 ZNF132P52740 706 aa13.18□□□□□ -0.3
DFFB-202ENST00000339350 MPP2Q14168 576 aa13.18□□□□□ -0.3
DFFB-202ENST00000339350 HP1BP3Q5SSJ5 553 aaPredicted RBP13.18□□□□□ -0.3
DFFB-202ENST00000339350 VSTM1Q6UX27 236 aa13.18□□□□□ -0.3
DFFB-202ENST00000339350 OSTM1Q86WC4 334 aa13.18□□□□□ -0.3
DFFB-202ENST00000339350 PLEKHO2Q8TD55 490 aa13.18□□□□□ -0.3
DFFB-202ENST00000339350 DCAF4Q8WV16 495 aa13.18□□□□□ -0.3
DFFB-202ENST00000339350 PRMT6Q96LA8 375 aaPredicted RBP13.18□□□□□ -0.3
DFFB-202ENST00000339350 LXNQ9BS40 222 aa13.18□□□□□ -0.3
DFFB-202ENST00000339350 GLT8D2Q9H1C3 349 aa13.18□□□□□ -0.3
DFFB-202ENST00000339350 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.18□□□□□ -0.3
DFFB-202ENST00000339350 PCDHA3Q9Y5H8 950 aa13.18□□□□□ -0.3
DFFB-202ENST00000339350 B3GALNT1O75752 331 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms