RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 NEUROG2Q9H2A3 272 aa23.67■■□□□ 1.38
PDLIM2-203ENST00000339162 MTUS1Q9ULD2 1270 aa23.67■■□□□ 1.38
PDLIM2-203ENST00000339162 FSCN2O14926 492 aa23.67■■□□□ 1.38
PDLIM2-203ENST00000339162 PSMA2P25787 234 aa23.67■■□□□ 1.38
PDLIM2-203ENST00000339162 ECHS1P30084 290 aa23.67■■□□□ 1.38
PDLIM2-203ENST00000339162 GNL1P36915 607 aaPredicted RBP23.67■■□□□ 1.38
PDLIM2-203ENST00000339162 TAP1Q03518 808 aa23.67■■□□□ 1.38
PDLIM2-203ENST00000339162 APPL2Q8NEU8 664 aa23.67■■□□□ 1.38
PDLIM2-203ENST00000339162 ATG4AQ8WYN0 398 aa23.67■■□□□ 1.38
PDLIM2-203ENST00000339162 FAM124BQ9H5Z6 455 aaPredicted RBP23.67■■□□□ 1.38
PDLIM2-203ENST00000339162 CHST12Q9NRB3 414 aa23.67■■□□□ 1.38
PDLIM2-203ENST00000339162 CCDC130P13994 396 aa23.66■■□□□ 1.38
PDLIM2-203ENST00000339162 SNX1Q13596 522 aa23.66■■□□□ 1.38
PDLIM2-203ENST00000339162 LPIN1Q14693 890 aa23.66■■□□□ 1.38
PDLIM2-203ENST00000339162 PMF1Q6P1K2 205 aa23.66■■□□□ 1.38
PDLIM2-203ENST00000339162 EMBQ6PCB8 327 aa23.66■■□□□ 1.38
PDLIM2-203ENST00000339162 AGMOQ6ZNB7 445 aa23.66■■□□□ 1.38
PDLIM2-203ENST00000339162 TSEN2Q8NCE0 465 aaKnown RBP23.66■■□□□ 1.38
PDLIM2-203ENST00000339162 TRPV6Q9H1D0 765 aa23.66■■□□□ 1.38
PDLIM2-203ENST00000339162 GDAP2Q9NXN4 497 aa23.66■■□□□ 1.38
PDLIM2-203ENST00000339162 PTPN22Q9Y2R2 807 aa23.66■■□□□ 1.38
PDLIM2-203ENST00000339162 UTP11Q9Y3A2 253 aaKnown RBP23.66■■□□□ 1.38
PDLIM2-203ENST00000339162 CHRNA3P32297 505 aa23.65■■□□□ 1.38
PDLIM2-203ENST00000339162 PNPLA4P41247 253 aa23.65■■□□□ 1.38
PDLIM2-203ENST00000339162 PIGHQ14442 188 aaPredicted RBP23.65■■□□□ 1.38
PDLIM2-203ENST00000339162 ZNF268Q14587 947 aaPredicted RBP23.65■■□□□ 1.38
PDLIM2-203ENST00000339162 CCDC142Q17RM4 750 aa23.65■■□□□ 1.38
PDLIM2-203ENST00000339162 SV2CQ496J9 727 aa23.65■■□□□ 1.38
PDLIM2-203ENST00000339162 FAM102AQ5T9C2 384 aaPredicted RBP23.65■■□□□ 1.38
PDLIM2-203ENST00000339162 JAMLQ86YT9 394 aa23.65■■□□□ 1.38
PDLIM2-203ENST00000339162 KATNAL2Q8IYT4 538 aa23.65■■□□□ 1.38
PDLIM2-203ENST00000339162 FAM118BQ9BPY3 351 aa23.65■■□□□ 1.38
PDLIM2-203ENST00000339162 UBXN6Q9BZV1 441 aa23.65■■□□□ 1.38
PDLIM2-203ENST00000339162 ARL5CA6NH57 179 aa23.65■■□□□ 1.38
PDLIM2-203ENST00000339162 GRAP2O75791 330 aa23.65■■□□□ 1.38
PDLIM2-203ENST00000339162 ADORA2BP29275 332 aa23.65■■□□□ 1.38
PDLIM2-203ENST00000339162 OAS2P29728 719 aaKnown RBP23.65■■□□□ 1.38
PDLIM2-203ENST00000339162 GABRB2P47870 512 aa23.65■■□□□ 1.38
PDLIM2-203ENST00000339162 SCNN1GP51170 649 aa23.65■■□□□ 1.38
PDLIM2-203ENST00000339162 FAM193AP78312 1265 aa23.65■■□□□ 1.38
PDLIM2-203ENST00000339162 OR6B2Q6IFH4 312 aa23.65■■□□□ 1.38
PDLIM2-203ENST00000339162 UNC93AQ86WB7 457 aa23.65■■□□□ 1.38
PDLIM2-203ENST00000339162 ARFGAP1Q8N6T3 406 aa23.65■■□□□ 1.38
PDLIM2-203ENST00000339162 PXYLP1Q8TE99 480 aa23.65■■□□□ 1.38
PDLIM2-203ENST00000339162 GLT1D1Q96MS3 346 aa23.65■■□□□ 1.38
PDLIM2-203ENST00000339162 TSPYL2Q9H2G4 693 aaPredicted RBP23.65■■□□□ 1.38
PDLIM2-203ENST00000339162 SNX25Q9H3E2 840 aa23.65■■□□□ 1.38
PDLIM2-203ENST00000339162 WDR35Q9P2L0 1181 aa23.65■■□□□ 1.38
PDLIM2-203ENST00000339162 BHMG1C9JSJ3 638 aaPredicted RBP23.64■■□□□ 1.38
PDLIM2-203ENST00000339162 HUS1O60921 280 aa23.64■■□□□ 1.38
PDLIM2-203ENST00000339162 PTGIRP43119 386 aa23.64■■□□□ 1.38
PDLIM2-203ENST00000339162 PTK7Q13308 1070 aa23.64■■□□□ 1.38
PDLIM2-203ENST00000339162 PPP2R5EQ16537 467 aa23.64■■□□□ 1.38
PDLIM2-203ENST00000339162 FAM183BPQ6ZVS7 135 aa23.64■■□□□ 1.38
PDLIM2-203ENST00000339162 CCDC105Q8IYK2 499 aa23.64■■□□□ 1.38
PDLIM2-203ENST00000339162 ADGRF2Q8IZF7 708 aa23.64■■□□□ 1.38
PDLIM2-203ENST00000339162 IPO4Q8TEX9 1081 aaKnown RBP23.64■■□□□ 1.38
PDLIM2-203ENST00000339162 ZNF296Q8WUU4 475 aaPredicted RBP23.64■■□□□ 1.38
PDLIM2-203ENST00000339162 MCRS1Q96EZ8 462 aa23.64■■□□□ 1.38
PDLIM2-203ENST00000339162 TSPAN18Q96SJ8 248 aa23.64■■□□□ 1.38
PDLIM2-203ENST00000339162 CHST7Q9NS84 486 aa23.64■■□□□ 1.38
PDLIM2-203ENST00000339162 R3HDM2Q9Y2K5 976 aaKnown RBP23.64■■□□□ 1.38
PDLIM2-203ENST00000339162 POLR3GO15318 223 aaPredicted RBP23.64■■□□□ 1.37
PDLIM2-203ENST00000339162 MAP2K2P36507 400 aa23.64■■□□□ 1.37
PDLIM2-203ENST00000339162 COILP38432 576 aaPredicted RBP23.64■■□□□ 1.37
PDLIM2-203ENST00000339162 TRIM71Q2Q1W2 868 aaKnown RBP23.64■■□□□ 1.37
PDLIM2-203ENST00000339162 PKDCCQ504Y2 493 aa23.64■■□□□ 1.37
PDLIM2-203ENST00000339162 LHX8Q68G74 356 aa23.64■■□□□ 1.37
PDLIM2-203ENST00000339162 OSTM1Q86WC4 334 aa23.64■■□□□ 1.37
PDLIM2-203ENST00000339162 CAVIN3Q969G5 261 aa23.64■■□□□ 1.37
PDLIM2-203ENST00000339162 KRT1P04264 644 aa23.63■■□□□ 1.37
PDLIM2-203ENST00000339162 THP07101 528 aa23.63■■□□□ 1.37
PDLIM2-203ENST00000339162 KRT10P13645 584 aa23.63■■□□□ 1.37
PDLIM2-203ENST00000339162 LRPAP1P30533 357 aa23.63■■□□□ 1.37
PDLIM2-203ENST00000339162 CLCNKBP51801 687 aa23.63■■□□□ 1.37
PDLIM2-203ENST00000339162 ADCY2Q08462 1091 aa23.63■■□□□ 1.37
PDLIM2-203ENST00000339162 PDE4CQ08493 712 aa23.63■■□□□ 1.37
PDLIM2-203ENST00000339162 DHX34Q14147 1143 aaKnown RBP23.63■■□□□ 1.37
PDLIM2-203ENST00000339162 CYP1B1Q16678 543 aa23.63■■□□□ 1.37
PDLIM2-203ENST00000339162 SMTNL2Q2TAL5 461 aa23.63■■□□□ 1.37
PDLIM2-203ENST00000339162 KAZNQ674X7 775 aa23.63■■□□□ 1.37
PDLIM2-203ENST00000339162 EXD1Q8NHP7 514 aa23.63■■□□□ 1.37
PDLIM2-203ENST00000339162 ADAM2Q99965 735 aa23.63■■□□□ 1.37
PDLIM2-203ENST00000339162 PAAF1Q9BRP4 392 aa23.63■■□□□ 1.37
PDLIM2-203ENST00000339162 ERP44Q9BS26 406 aa23.63■■□□□ 1.37
PDLIM2-203ENST00000339162 OSBPL8Q9BZF1 889 aa23.63■■□□□ 1.37
PDLIM2-203ENST00000339162 ZWILCHQ9H900 591 aa23.63■■□□□ 1.37
PDLIM2-203ENST00000339162 HESX1Q9UBX0 185 aa23.63■■□□□ 1.37
PDLIM2-203ENST00000339162 CYB561D2O14569 222 aa23.63■■□□□ 1.37
PDLIM2-203ENST00000339162 ATP2C2O75185 946 aa23.63■■□□□ 1.37
PDLIM2-203ENST00000339162 LRCH4O75427 683 aa23.63■■□□□ 1.37
PDLIM2-203ENST00000339162 MYCP01106 439 aaPredicted RBP23.63■■□□□ 1.37
PDLIM2-203ENST00000339162 ACAT1P24752 427 aaKnown RBP23.63■■□□□ 1.37
PDLIM2-203ENST00000339162 CUL1Q13616 776 aa23.63■■□□□ 1.37
PDLIM2-203ENST00000339162 STILQ15468 1287 aa23.63■■□□□ 1.37
PDLIM2-203ENST00000339162 TAF5Q15542 800 aa23.63■■□□□ 1.37
PDLIM2-203ENST00000339162 KCNT1Q5JUK3 1230 aa23.63■■□□□ 1.37
PDLIM2-203ENST00000339162 SCUBE3Q8IX30 993 aa23.63■■□□□ 1.37
PDLIM2-203ENST00000339162 HACE1Q8IYU2 909 aa23.63■■□□□ 1.37
PDLIM2-203ENST00000339162 NIPA2Q8N8Q9 360 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms