RNA–Protein interactions for RNA: ENST00000338784.8

TNFSF13-201, Transcript of TNF superfamily member 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,971 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-201ENST00000338784 JOSD2Q8TAC2 188 aa15.84■□□□□ 0.13
TNFSF13-201ENST00000338784 ZNF668Q96K58 619 aaPredicted RBP15.84■□□□□ 0.13
TNFSF13-201ENST00000338784 SPATA33Q96N06 139 aa15.84■□□□□ 0.13
TNFSF13-201ENST00000338784 BCO2Q9BYV7 579 aa15.84■□□□□ 0.13
TNFSF13-201ENST00000338784 SYNCQ9H7C4 482 aa15.84■□□□□ 0.13
TNFSF13-201ENST00000338784 RPF1Q9H9Y2 349 aaKnown RBP15.84■□□□□ 0.13
TNFSF13-201ENST00000338784 SENP1Q9P0U3 644 aa15.84■□□□□ 0.13
TNFSF13-201ENST00000338784 WDR35Q9P2L0 1181 aa15.84■□□□□ 0.13
TNFSF13-201ENST00000338784 CYTH4Q9UIA0 394 aa15.84■□□□□ 0.13
TNFSF13-201ENST00000338784 PRPF4O43172 522 aaKnown RBP eCLIP15.83■□□□□ 0.12
TNFSF13-201ENST00000338784 CST8O60676 142 aa15.83■□□□□ 0.12
TNFSF13-201ENST00000338784 PGK2P07205 417 aa15.83■□□□□ 0.12
TNFSF13-201ENST00000338784 GJB1P08034 283 aa15.83■□□□□ 0.12
TNFSF13-201ENST00000338784 CXCL8P10145 99 aa15.83■□□□□ 0.12
TNFSF13-201ENST00000338784 KRT15P19012 456 aa15.83■□□□□ 0.12
TNFSF13-201ENST00000338784 KDELR1P24390 212 aa15.83■□□□□ 0.12
TNFSF13-201ENST00000338784 IL1R2P27930 398 aa15.83■□□□□ 0.12
TNFSF13-201ENST00000338784 SLC18A1P54219 525 aa15.83■□□□□ 0.12
TNFSF13-201ENST00000338784 WDR4P57081 412 aaKnown RBP15.83■□□□□ 0.12
TNFSF13-201ENST00000338784 OTUD4Q01804 1114 aaKnown RBP15.83■□□□□ 0.12
TNFSF13-201ENST00000338784 HIF1AQ16665 826 aa15.83■□□□□ 0.12
TNFSF13-201ENST00000338784 EEF1DP3Q658K8 133 aa15.83■□□□□ 0.12
TNFSF13-201ENST00000338784 CAPN12Q6ZSI9 719 aa15.83■□□□□ 0.12
TNFSF13-201ENST00000338784 BBS12Q6ZW61 710 aa15.83■□□□□ 0.12
TNFSF13-201ENST00000338784 CDR2LQ86X02 465 aaPredicted RBP15.83■□□□□ 0.12
TNFSF13-201ENST00000338784 ACTL9Q8TC94 416 aa15.83■□□□□ 0.12
TNFSF13-201ENST00000338784 MAGEC3Q8TD91 643 aa15.83■□□□□ 0.12
TNFSF13-201ENST00000338784 TRAPPC12Q8WVT3 735 aa15.83■□□□□ 0.12
TNFSF13-201ENST00000338784 SMC6Q96SB8 1091 aa15.83■□□□□ 0.12
TNFSF13-201ENST00000338784 PAIP2Q9BPZ3 127 aaKnown RBP15.83■□□□□ 0.12
TNFSF13-201ENST00000338784 PITPNM3Q9BZ71 974 aa15.83■□□□□ 0.12
TNFSF13-201ENST00000338784 TRABDQ9H4I3 376 aa15.83■□□□□ 0.12
TNFSF13-201ENST00000338784 KLHL14Q9P2G3 628 aa15.83■□□□□ 0.12
TNFSF13-201ENST00000338784 SAE1Q9UBE0 346 aaPredicted RBP15.83■□□□□ 0.12
TNFSF13-201ENST00000338784 TJP2Q9UDY2 1190 aa15.83■□□□□ 0.12
TNFSF13-201ENST00000338784 SLC24A2Q9UI40 661 aa15.83■□□□□ 0.12
TNFSF13-201ENST00000338784 AGAP1Q9UPQ3 857 aa15.83■□□□□ 0.12
TNFSF13-201ENST00000338784 SMG5Q9UPR3 1016 aaKnown RBP15.83■□□□□ 0.12
TNFSF13-201ENST00000338784 TNFSF13BQ9Y275 285 aa15.83■□□□□ 0.12
TNFSF13-201ENST00000338784 FARP1Q9Y4F1 1045 aaPredicted RBP15.83■□□□□ 0.12
TNFSF13-201ENST00000338784 SPAG7O75391 227 aa15.82■□□□□ 0.12
TNFSF13-201ENST00000338784 ASMTLO95671 621 aa15.82■□□□□ 0.12
TNFSF13-201ENST00000338784 SLC25A27O95847 323 aa15.82■□□□□ 0.12
TNFSF13-201ENST00000338784 FOXN2P32314 431 aa15.82■□□□□ 0.12
TNFSF13-201ENST00000338784 CTCFP49711 727 aaPredicted RBP15.82■□□□□ 0.12
TNFSF13-201ENST00000338784 SLC26A2P50443 739 aa15.82■□□□□ 0.12
TNFSF13-201ENST00000338784 RAD23BP54727 409 aa15.82■□□□□ 0.12
TNFSF13-201ENST00000338784 GSCP56915 257 aaPredicted RBP15.82■□□□□ 0.12
TNFSF13-201ENST00000338784 MBTD1Q05BQ5 628 aa15.82■□□□□ 0.12
TNFSF13-201ENST00000338784 BNIP1Q12981 228 aa15.82■□□□□ 0.12
TNFSF13-201ENST00000338784 RASA2Q15283 850 aa15.82■□□□□ 0.12
TNFSF13-201ENST00000338784 CGB2Q6NT52 195 aa15.82■□□□□ 0.12
TNFSF13-201ENST00000338784 TBC1D1Q86TI0 1168 aaPredicted RBP15.82■□□□□ 0.12
TNFSF13-201ENST00000338784 XYLT1Q86Y38 959 aa15.82■□□□□ 0.12
TNFSF13-201ENST00000338784 PPIL6Q8IXY8 311 aa15.82■□□□□ 0.12
TNFSF13-201ENST00000338784 KIAA0319LQ8IZA0 1049 aa15.82■□□□□ 0.12
TNFSF13-201ENST00000338784 FAXDC2Q96IV6 333 aa15.82■□□□□ 0.12
TNFSF13-201ENST00000338784 CPXM1Q96SM3 734 aa15.82■□□□□ 0.12
TNFSF13-201ENST00000338784 PHACTR1Q9C0D0 580 aa15.82■□□□□ 0.12
TNFSF13-201ENST00000338784 CDT1Q9H211 546 aa15.82■□□□□ 0.12
TNFSF13-201ENST00000338784 RXFP1Q9HBX9 757 aa15.82■□□□□ 0.12
TNFSF13-201ENST00000338784 SIX4Q9UIU6 781 aa15.82■□□□□ 0.12
TNFSF13-201ENST00000338784 SBF1O95248 1867 aa15.82■□□□□ 0.12
TNFSF13-201ENST00000338784 GOLGA8MH3BSY2 632 aa15.82■□□□□ 0.12
TNFSF13-201ENST00000338784 CDH8P55286 799 aa15.82■□□□□ 0.12
TNFSF13-201ENST00000338784 MYO1EQ12965 1108 aa15.82■□□□□ 0.12
TNFSF13-201ENST00000338784 ZNF268Q14587 947 aaPredicted RBP15.82■□□□□ 0.12
TNFSF13-201ENST00000338784 PKN2Q16513 984 aaKnown RBP15.82■□□□□ 0.12
TNFSF13-201ENST00000338784 TAZQ16635 292 aa15.82■□□□□ 0.12
TNFSF13-201ENST00000338784 EFCAB12Q6NXP0 572 aa15.82■□□□□ 0.12
TNFSF13-201ENST00000338784 TMEM192Q8IY95 271 aa15.82■□□□□ 0.12
TNFSF13-201ENST00000338784 C1orf127Q8N9H9 656 aa15.82■□□□□ 0.12
TNFSF13-201ENST00000338784 DENND1AQ8TEH3 1009 aa15.82■□□□□ 0.12
TNFSF13-201ENST00000338784 RSAD2Q8WXG1 361 aa15.82■□□□□ 0.12
TNFSF13-201ENST00000338784 R3HDMLQ9H3Y0 253 aa15.82■□□□□ 0.12
TNFSF13-201ENST00000338784 SMARCAD1Q9H4L7 1026 aa15.82■□□□□ 0.12
TNFSF13-201ENST00000338784 ECT2Q9H8V3 914 aa15.82■□□□□ 0.12
TNFSF13-201ENST00000338784 METTL5Q9NRN9 209 aaKnown RBP15.82■□□□□ 0.12
TNFSF13-201ENST00000338784 PSMC3IPQ9P2W1 217 aaPredicted RBP15.82■□□□□ 0.12
TNFSF13-201ENST00000338784 IRF6O14896 467 aa15.81■□□□□ 0.12
TNFSF13-201ENST00000338784 MAGEB2O15479 319 aa15.81■□□□□ 0.12
TNFSF13-201ENST00000338784 HBP1O60381 514 aa15.81■□□□□ 0.12
TNFSF13-201ENST00000338784 CNMDO75829 334 aa15.81■□□□□ 0.12
TNFSF13-201ENST00000338784 TOMM70O94826 608 aa15.81■□□□□ 0.12
TNFSF13-201ENST00000338784 PSMC4P43686 418 aa15.81■□□□□ 0.12
TNFSF13-201ENST00000338784 APLP1P51693 650 aa15.81■□□□□ 0.12
TNFSF13-201ENST00000338784 CLCN3P51790 818 aa15.81■□□□□ 0.12
TNFSF13-201ENST00000338784 GDF10P55107 478 aa15.81■□□□□ 0.12
TNFSF13-201ENST00000338784 ARL4CP56559 192 aa15.81■□□□□ 0.12
TNFSF13-201ENST00000338784 NCALDP61601 193 aa15.81■□□□□ 0.12
TNFSF13-201ENST00000338784 ACVR2BQ13705 512 aa15.81■□□□□ 0.12
TNFSF13-201ENST00000338784 SPARCL1Q14515 664 aa15.81■□□□□ 0.12
TNFSF13-201ENST00000338784 RNF43Q68DV7 783 aa15.81■□□□□ 0.12
TNFSF13-201ENST00000338784 DLK2Q6UY11 383 aa15.81■□□□□ 0.12
TNFSF13-201ENST00000338784 FAM228AQ86W67 206 aa15.81■□□□□ 0.12
TNFSF13-201ENST00000338784 ANKMY2Q8IV38 441 aa15.81■□□□□ 0.12
TNFSF13-201ENST00000338784 FITM2Q8N6M3 262 aa15.81■□□□□ 0.12
TNFSF13-201ENST00000338784 EMC1Q8N766 993 aa15.81■□□□□ 0.12
TNFSF13-201ENST00000338784 KCTD6Q8NC69 237 aa15.81■□□□□ 0.12
TNFSF13-201ENST00000338784 CPT1BQ92523 772 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms