RNA–Protein interactions for RNA: ENST00000337604.6

MUC1-201, Transcript of mucin 1, cell surface associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MUC1, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-201ENST00000337604 KBTBD7Q8WVZ9 684 aa17.14■□□□□ 0.33
MUC1-201ENST00000337604 TRIM9Q9C026 710 aa17.14■□□□□ 0.33
MUC1-201ENST00000337604 ZSCAN16Q9H4T2 348 aaPredicted RBP17.14■□□□□ 0.33
MUC1-201ENST00000337604 EBF3Q9H4W6 596 aa17.14■□□□□ 0.33
MUC1-201ENST00000337604 TMEM206Q9H813 350 aa17.14■□□□□ 0.33
MUC1-201ENST00000337604 TDP1Q9NUW8 608 aa17.14■□□□□ 0.33
MUC1-201ENST00000337604 INTS13Q9NVM9 706 aa17.14■□□□□ 0.33
MUC1-201ENST00000337604 KBTBD4Q9NVX7 518 aa17.14■□□□□ 0.33
MUC1-201ENST00000337604 THG1LQ9NWX6 298 aaKnown RBP17.14■□□□□ 0.33
MUC1-201ENST00000337604 ZMYM5Q9UJ78 669 aa17.14■□□□□ 0.33
MUC1-201ENST00000337604 USP18Q9UMW8 372 aa17.14■□□□□ 0.33
MUC1-201ENST00000337604 SPAG17Q6Q759 2223 aa17.13■□□□□ 0.33
MUC1-201ENST00000337604 RBP5P82980 135 aa17.13■□□□□ 0.33
MUC1-201ENST00000337604 MYL7Q01449 175 aa17.13■□□□□ 0.33
MUC1-201ENST00000337604 LMNB2Q03252 620 aa17.13■□□□□ 0.33
MUC1-201ENST00000337604 SPEM2Q0P670 501 aa17.13■□□□□ 0.33
MUC1-201ENST00000337604 CFAP221Q4G0U5 840 aa17.13■□□□□ 0.33
MUC1-201ENST00000337604 TMEM196Q5HYL7 178 aa17.13■□□□□ 0.33
MUC1-201ENST00000337604 FSTL4Q6MZW2 842 aa17.13■□□□□ 0.33
MUC1-201ENST00000337604 MON1AQ86VX9 555 aa17.13■□□□□ 0.33
MUC1-201ENST00000337604 CCDC65Q8IXS2 484 aa17.13■□□□□ 0.33
MUC1-201ENST00000337604 SPATA18Q8TC71 538 aa17.13■□□□□ 0.33
MUC1-201ENST00000337604 MRPS31Q92665 395 aaKnown RBP17.13■□□□□ 0.33
MUC1-201ENST00000337604 TRMT2BQ96GJ1 504 aaKnown RBP17.13■□□□□ 0.33
MUC1-201ENST00000337604 MYRFLQ96LU7 910 aa17.13■□□□□ 0.33
MUC1-201ENST00000337604 SLC22A12Q96S37 553 aa17.13■□□□□ 0.33
MUC1-201ENST00000337604 TNMDQ9H2S6 317 aa17.13■□□□□ 0.33
MUC1-201ENST00000337604 KIF9Q9HAQ2 790 aa17.13■□□□□ 0.33
MUC1-201ENST00000337604 K7ELQ4 463 aaPredicted RBP17.12■□□□□ 0.33
MUC1-201ENST00000337604 ATP2C2O75185 946 aa17.12■□□□□ 0.33
MUC1-201ENST00000337604 HOXA6P31267 233 aa17.12■□□□□ 0.33
MUC1-201ENST00000337604 ATXN1P54253 815 aaKnown RBP17.12■□□□□ 0.33
MUC1-201ENST00000337604 RPL10AP62906 217 aaKnown RBP17.12■□□□□ 0.33
MUC1-201ENST00000337604 USP4Q13107 963 aa17.12■□□□□ 0.33
MUC1-201ENST00000337604 RUNX3Q13761 415 aa17.12■□□□□ 0.33
MUC1-201ENST00000337604 SIM2Q14190 667 aaPredicted RBP17.12■□□□□ 0.33
MUC1-201ENST00000337604 ZNF268Q14587 947 aaPredicted RBP17.12■□□□□ 0.33
MUC1-201ENST00000337604 STK38Q15208 465 aa17.12■□□□□ 0.33
MUC1-201ENST00000337604 FAM171BQ6P995 826 aa17.12■□□□□ 0.33
MUC1-201ENST00000337604 LONP2Q86WA8 852 aa17.12■□□□□ 0.33
MUC1-201ENST00000337604 SYNPOQ8N3V7 929 aa17.12■□□□□ 0.33
MUC1-201ENST00000337604 ANKRD36BP1Q96IX9 119 aa17.12■□□□□ 0.33
MUC1-201ENST00000337604 FBRSL1Q9HCM7 1045 aaKnown RBP17.12■□□□□ 0.33
MUC1-201ENST00000337604 HSPBP1Q9NZL4 362 aa17.12■□□□□ 0.33
MUC1-201ENST00000337604 RAB23Q9ULC3 237 aa17.12■□□□□ 0.33
MUC1-201ENST00000337604 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.12■□□□□ 0.33
MUC1-201ENST00000337604 HELZP42694 1942 aaKnown RBP17.11■□□□□ 0.33
MUC1-201ENST00000337604 EML5Q05BV3 1969 aa17.11■□□□□ 0.33
MUC1-201ENST00000337604 RALGAPA1Q6GYQ0 2036 aa17.11■□□□□ 0.33
MUC1-201ENST00000337604 SOBPA7XYQ1 873 aa17.11■□□□□ 0.33
MUC1-201ENST00000337604 KIAA0391O15091 583 aaKnown RBP17.11■□□□□ 0.33
MUC1-201ENST00000337604 SPTLC2O15270 562 aa17.11■□□□□ 0.33
MUC1-201ENST00000337604 RETP07949 1114 aa17.11■□□□□ 0.33
MUC1-201ENST00000337604 LMO2P25791 158 aa17.11■□□□□ 0.33
MUC1-201ENST00000337604 PCSK1P29120 753 aa17.11■□□□□ 0.33
MUC1-201ENST00000337604 LHX1P48742 406 aa17.11■□□□□ 0.33
MUC1-201ENST00000337604 PSMC1P62191 440 aaKnown RBP17.11■□□□□ 0.33
MUC1-201ENST00000337604 ZNF77Q15935 545 aa17.11■□□□□ 0.33
MUC1-201ENST00000337604 SHC4Q6S5L8 630 aa17.11■□□□□ 0.33
MUC1-201ENST00000337604 EPM2AIP1Q7L775 607 aaPredicted RBP17.11■□□□□ 0.33
MUC1-201ENST00000337604 SPATA2LQ8IUW3 424 aaPredicted RBP17.11■□□□□ 0.33
MUC1-201ENST00000337604 MYLPFQ96A32 169 aa17.11■□□□□ 0.33
MUC1-201ENST00000337604 FUBP3Q96I24 572 aaKnown RBP eCLIP17.11■□□□□ 0.33
MUC1-201ENST00000337604 HPDLQ96IR7 371 aa17.11■□□□□ 0.33
MUC1-201ENST00000337604 SYT15Q9BQS2 421 aa17.11■□□□□ 0.33
MUC1-201ENST00000337604 CRTAC1Q9NQ79 661 aa17.11■□□□□ 0.33
MUC1-201ENST00000337604 TFIP11Q9UBB9 837 aaKnown RBP17.11■□□□□ 0.33
MUC1-201ENST00000337604 UXTQ9UBK9 157 aaPredicted RBP17.11■□□□□ 0.33
MUC1-201ENST00000337604 NME7Q9Y5B8 376 aa17.11■□□□□ 0.33
MUC1-201ENST00000337604 KIAA1549LQ6ZVL6 1849 aa17.11■□□□□ 0.33
MUC1-201ENST00000337604 MYO16Q9Y6X6 1858 aa17.11■□□□□ 0.33
MUC1-201ENST00000337604 ZNF233A6NK53 670 aa17.1■□□□□ 0.33
MUC1-201ENST00000337604 PRR5-ARHGAP8B1AHC4 643 aa17.1■□□□□ 0.33
MUC1-201ENST00000337604 TRDMT1O14717 391 aaKnown RBP17.1■□□□□ 0.33
MUC1-201ENST00000337604 EIF3DO15371 548 aaKnown RBP eCLIP17.1■□□□□ 0.33
MUC1-201ENST00000337604 TGFB1I1O43294 461 aa17.1■□□□□ 0.33
MUC1-201ENST00000337604 PPP6R2O75170 966 aa17.1■□□□□ 0.33
MUC1-201ENST00000337604 EGFP01133 1207 aa17.1■□□□□ 0.33
MUC1-201ENST00000337604 MAGEA11P43364 429 aa17.1■□□□□ 0.33
MUC1-201ENST00000337604 ARHGAP8P85298 464 aa17.1■□□□□ 0.33
MUC1-201ENST00000337604 FAM160A1Q05DH4 1040 aa17.1■□□□□ 0.33
MUC1-201ENST00000337604 EHHADHQ08426 723 aa17.1■□□□□ 0.33
MUC1-201ENST00000337604 MTF1Q14872 753 aa17.1■□□□□ 0.33
MUC1-201ENST00000337604 WDR5BQ86VZ2 330 aa17.1■□□□□ 0.33
MUC1-201ENST00000337604 SCN4BQ8IWT1 228 aa17.1■□□□□ 0.33
MUC1-201ENST00000337604 DHX58Q96C10 678 aa17.1■□□□□ 0.33
MUC1-201ENST00000337604 CYP2S1Q96SQ9 504 aa17.1■□□□□ 0.33
MUC1-201ENST00000337604 BACH2Q9BYV9 841 aa17.1■□□□□ 0.33
MUC1-201ENST00000337604 GZF1Q9H116 711 aaPredicted RBP17.1■□□□□ 0.33
MUC1-201ENST00000337604 TRPC7Q9HCX4 862 aa17.1■□□□□ 0.33
MUC1-201ENST00000337604 AGPAT3Q9NRZ7 376 aa17.1■□□□□ 0.33
MUC1-201ENST00000337604 POLR3BQ9NW08 1133 aaPredicted RBP17.1■□□□□ 0.33
MUC1-201ENST00000337604 GCNT4Q9P109 453 aa17.1■□□□□ 0.33
MUC1-201ENST00000337604 CDV3Q9UKY7 258 aaKnown RBP17.1■□□□□ 0.33
MUC1-201ENST00000337604 CNOT1A5YKK6 2376 aaKnown RBP17.09■□□□□ 0.33
MUC1-201ENST00000337604 C2orf78A6NCI8 922 aa17.09■□□□□ 0.33
MUC1-201ENST00000337604 TNNC2P02585 160 aa17.09■□□□□ 0.33
MUC1-201ENST00000337604 CASP1P29466 404 aa17.09■□□□□ 0.33
MUC1-201ENST00000337604 CNR2P34972 360 aa17.09■□□□□ 0.33
MUC1-201ENST00000337604 PXNP49023 591 aaPredicted RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms