RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 MGAT5Q09328 741 aa17.34■□□□□ 0.37
CDC42EP4-201ENST00000335793 C7orf43Q8WVR3 580 aa17.34■□□□□ 0.37
CDC42EP4-201ENST00000335793 SLITRK1Q96PX8 696 aa17.34■□□□□ 0.37
CDC42EP4-201ENST00000335793 MTMR12Q9C0I1 747 aa17.34■□□□□ 0.37
CDC42EP4-201ENST00000335793 KIAA1683Q9H0B3 1180 aa17.34■□□□□ 0.37
CDC42EP4-201ENST00000335793 UBN1Q9NPG3 1134 aa17.34■□□□□ 0.37
CDC42EP4-201ENST00000335793 GJA3Q9Y6H8 435 aa17.34■□□□□ 0.37
CDC42EP4-201ENST00000335793 ZNF541Q9H0D2 1346 aa17.34■□□□□ 0.37
CDC42EP4-201ENST00000335793 SIPA1L1O43166 1804 aa17.34■□□□□ 0.37
CDC42EP4-201ENST00000335793 CST8O60676 142 aa17.34■□□□□ 0.37
CDC42EP4-201ENST00000335793 CAPN15O75808 1086 aa17.34■□□□□ 0.37
CDC42EP4-201ENST00000335793 LDHAP00338 332 aaKnown RBP17.34■□□□□ 0.37
CDC42EP4-201ENST00000335793 RAD23BP54727 409 aa17.34■□□□□ 0.37
CDC42EP4-201ENST00000335793 CXCL9Q07325 125 aa17.34■□□□□ 0.37
CDC42EP4-201ENST00000335793 NR1H3Q13133 447 aa17.34■□□□□ 0.37
CDC42EP4-201ENST00000335793 TFDP1Q14186 410 aa17.34■□□□□ 0.37
CDC42EP4-201ENST00000335793 SCARA3Q6AZY7 606 aa17.34■□□□□ 0.37
CDC42EP4-201ENST00000335793 RTKN2Q8IZC4 609 aa17.34■□□□□ 0.37
CDC42EP4-201ENST00000335793 PHC3Q8NDX5 983 aa17.34■□□□□ 0.37
CDC42EP4-201ENST00000335793 ASAP3Q8TDY4 903 aa17.34■□□□□ 0.37
CDC42EP4-201ENST00000335793 GPRASP2Q96D09 838 aa17.34■□□□□ 0.37
CDC42EP4-201ENST00000335793 MYOZ2Q9NPC6 264 aa17.34■□□□□ 0.37
CDC42EP4-201ENST00000335793 WDR35Q9P2L0 1181 aa17.34■□□□□ 0.37
CDC42EP4-201ENST00000335793 NKX1-2Q9UD57 310 aaPredicted RBP17.34■□□□□ 0.37
CDC42EP4-201ENST00000335793 UNC5CO95185 931 aa17.33■□□□□ 0.37
CDC42EP4-201ENST00000335793 ZBTB7AO95365 584 aa17.33■□□□□ 0.37
CDC42EP4-201ENST00000335793 PHBP35232 272 aa17.33■□□□□ 0.37
CDC42EP4-201ENST00000335793 MYL6P60660 151 aa17.33■□□□□ 0.37
CDC42EP4-201ENST00000335793 SLC1A5Q15758 541 aa17.33■□□□□ 0.37
CDC42EP4-201ENST00000335793 EAPPQ56P03 285 aaPredicted RBP17.33■□□□□ 0.37
CDC42EP4-201ENST00000335793 PLEKHA7Q6IQ23 1121 aa17.33■□□□□ 0.37
CDC42EP4-201ENST00000335793 UCMAQ8WVF2 138 aa17.33■□□□□ 0.37
CDC42EP4-201ENST00000335793 HSPH1Q92598 858 aa17.33■□□□□ 0.37
CDC42EP4-201ENST00000335793 ARHGAP28Q9P2N2 729 aa17.33■□□□□ 0.37
CDC42EP4-201ENST00000335793 ZNRF3Q9ULT6 936 aa17.33■□□□□ 0.37
CDC42EP4-201ENST00000335793 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.33■□□□□ 0.36
CDC42EP4-201ENST00000335793 OAS1P00973 400 aaKnown RBP17.33■□□□□ 0.36
CDC42EP4-201ENST00000335793 CALB1P05937 261 aa17.33■□□□□ 0.36
CDC42EP4-201ENST00000335793 TMEM191BP0C7N4 346 aa17.33■□□□□ 0.36
CDC42EP4-201ENST00000335793 C1QBPQ07021 282 aaKnown RBP17.33■□□□□ 0.36
CDC42EP4-201ENST00000335793 RIPK1Q13546 671 aa17.33■□□□□ 0.36
CDC42EP4-201ENST00000335793 R3HDM1Q15032 1099 aaKnown RBP17.33■□□□□ 0.36
CDC42EP4-201ENST00000335793 CGB2Q6NT52 195 aa17.33■□□□□ 0.36
CDC42EP4-201ENST00000335793 RFX6Q8HWS3 928 aa17.33■□□□□ 0.36
CDC42EP4-201ENST00000335793 CTAGE3PQ8IX95 158 aa17.33■□□□□ 0.36
CDC42EP4-201ENST00000335793 ACTL9Q8TC94 416 aa17.33■□□□□ 0.36
CDC42EP4-201ENST00000335793 TROVE2P10155 538 aaKnown RBP eCLIP17.32■□□□□ 0.36
CDC42EP4-201ENST00000335793 ETS2P15036 469 aa17.32■□□□□ 0.36
CDC42EP4-201ENST00000335793 TNFSF9P41273 254 aa17.32■□□□□ 0.36
CDC42EP4-201ENST00000335793 MPP3Q13368 585 aa17.32■□□□□ 0.36
CDC42EP4-201ENST00000335793 EFTUD2Q15029 972 aaKnown RBP eCLIP17.32■□□□□ 0.369e-6■■□□□ 13.8
CDC42EP4-201ENST00000335793 CCDC6Q16204 474 aa17.32■□□□□ 0.36
CDC42EP4-201ENST00000335793 TFDP3Q5H9I0 405 aa17.32■□□□□ 0.36
CDC42EP4-201ENST00000335793 RIBC1Q8N443 379 aaPredicted RBP17.32■□□□□ 0.36
CDC42EP4-201ENST00000335793 EMC1Q8N766 993 aa17.32■□□□□ 0.36
CDC42EP4-201ENST00000335793 SNRNP27Q8WVK2 155 aaKnown RBP17.32■□□□□ 0.36
CDC42EP4-201ENST00000335793 MAML1Q92585 1016 aa17.32■□□□□ 0.36
CDC42EP4-201ENST00000335793 LGALS13Q9UHV8 139 aa17.32■□□□□ 0.36
CDC42EP4-201ENST00000335793 DCTN3O75935 186 aa17.32■□□□□ 0.36
CDC42EP4-201ENST00000335793 ACO1P21399 889 aaKnown RBP17.32■□□□□ 0.36
CDC42EP4-201ENST00000335793 KLRC2P26717 231 aa17.32■□□□□ 0.36
CDC42EP4-201ENST00000335793 OTUD4Q01804 1114 aaKnown RBP17.32■□□□□ 0.36
CDC42EP4-201ENST00000335793 GAD2Q05329 585 aa17.32■□□□□ 0.36
CDC42EP4-201ENST00000335793 TNFAIP1Q13829 316 aa17.32■□□□□ 0.36
CDC42EP4-201ENST00000335793 MYBPC3Q14896 1274 aa17.32■□□□□ 0.36
CDC42EP4-201ENST00000335793 GALNTL6Q49A17 601 aa17.32■□□□□ 0.36
CDC42EP4-201ENST00000335793 RDM1Q8NG50 284 aa17.32■□□□□ 0.36
CDC42EP4-201ENST00000335793 ABTB1Q969K4 478 aaPredicted RBP17.32■□□□□ 0.36
CDC42EP4-201ENST00000335793 CDHR1Q96JP9 859 aa17.32■□□□□ 0.36
CDC42EP4-201ENST00000335793 PSMC3IPQ9P2W1 217 aaPredicted RBP17.32■□□□□ 0.36
CDC42EP4-201ENST00000335793 ZFP69BQ9UJL9 534 aa17.32■□□□□ 0.36
CDC42EP4-201ENST00000335793 SMG5Q9UPR3 1016 aaKnown RBP17.32■□□□□ 0.36
CDC42EP4-201ENST00000335793 PIK3R2O00459 728 aa17.32■□□□□ 0.36
CDC42EP4-201ENST00000335793 GLRA2P23416 452 aa17.32■□□□□ 0.36
CDC42EP4-201ENST00000335793 PAX3P23760 479 aa17.32■□□□□ 0.36
CDC42EP4-201ENST00000335793 YWHAGP61981 247 aaKnown RBP eCLIP17.32■□□□□ 0.36
CDC42EP4-201ENST00000335793 TMEM63BQ5T3F8 832 aa17.32■□□□□ 0.36
CDC42EP4-201ENST00000335793 RASIP1Q5U651 963 aa17.32■□□□□ 0.36
CDC42EP4-201ENST00000335793 RNF43Q68DV7 783 aa17.32■□□□□ 0.36
CDC42EP4-201ENST00000335793 SAMD7Q7Z3H4 446 aa17.32■□□□□ 0.36
CDC42EP4-201ENST00000335793 KCTD6Q8NC69 237 aa17.32■□□□□ 0.36
CDC42EP4-201ENST00000335793 TTC17Q96AE7 1141 aa17.32■□□□□ 0.36
CDC42EP4-201ENST00000335793 IQCGQ9H095 443 aaKnown RBP17.32■□□□□ 0.36
CDC42EP4-201ENST00000335793 ARHGEF3Q9NR81 526 aa17.32■□□□□ 0.36
CDC42EP4-201ENST00000335793 CFAP69A5D8W1 941 aa17.31■□□□□ 0.36
CDC42EP4-201ENST00000335793 ASMTLO95671 621 aa17.31■□□□□ 0.36
CDC42EP4-201ENST00000335793 EGFRP00533 1210 aa17.31■□□□□ 0.36
CDC42EP4-201ENST00000335793 KCNA2P16389 499 aa17.31■□□□□ 0.36
CDC42EP4-201ENST00000335793 ADRA1DP25100 572 aa17.31■□□□□ 0.36
CDC42EP4-201ENST00000335793 RASSF2P50749 326 aa17.31■□□□□ 0.36
CDC42EP4-201ENST00000335793 VCPP55072 806 aaKnown RBP17.31■□□□□ 0.36
CDC42EP4-201ENST00000335793 ARL4CP56559 192 aa17.31■□□□□ 0.36
CDC42EP4-201ENST00000335793 ZC3H18Q86VM9 953 aaKnown RBP17.31■□□□□ 0.36
CDC42EP4-201ENST00000335793 PHF13Q86YI8 300 aaPredicted RBP17.31■□□□□ 0.36
CDC42EP4-201ENST00000335793 ALLCQ8N6M5 410 aa17.31■□□□□ 0.36
CDC42EP4-201ENST00000335793 VCPIP1Q96JH7 1222 aa17.31■□□□□ 0.36
CDC42EP4-201ENST00000335793 MAK16Q9BXY0 300 aaKnown RBP17.31■□□□□ 0.36
CDC42EP4-201ENST00000335793 DEFB129Q9H1M3 183 aa17.31■□□□□ 0.36
CDC42EP4-201ENST00000335793 CISHQ9NSE2 258 aa17.31■□□□□ 0.36
CDC42EP4-201ENST00000335793 SLX4Q8IY92 1834 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms