RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 EMC1Q8N766 993 aa15.67■□□□□ 0.1
C9orf47-201ENST00000334490 SLC20A1Q8WUM9 679 aa15.67■□□□□ 0.1
C9orf47-201ENST00000334490 TARSL2A2RTX5 802 aaKnown RBP15.67■□□□□ 0.1
C9orf47-201ENST00000334490 MAPK13O15264 365 aa15.67■□□□□ 0.1
C9orf47-201ENST00000334490 RECQL4O94761 1208 aa15.67■□□□□ 0.1
C9orf47-201ENST00000334490 KITP10721 976 aa15.67■□□□□ 0.1
C9orf47-201ENST00000334490 GTF2H3Q13889 308 aa15.67■□□□□ 0.1
C9orf47-201ENST00000334490 ELMO3Q96BJ8 720 aa15.67■□□□□ 0.1
C9orf47-201ENST00000334490 MRPL9Q9BYD2 267 aaKnown RBP15.67■□□□□ 0.1
C9orf47-201ENST00000334490 GPR63Q9BZJ6 419 aa15.67■□□□□ 0.1
C9orf47-201ENST00000334490 CARD9Q9H257 536 aa15.67■□□□□ 0.1
C9orf47-201ENST00000334490 HSPA8P11142 646 aaKnown RBP15.67■□□□□ 0.1
C9orf47-201ENST00000334490 SZRD1Q7Z422 152 aa15.67■□□□□ 0.1
C9orf47-201ENST00000334490 NFASCO94856 1347 aa15.67■□□□□ 0.1
C9orf47-201ENST00000334490 PIK3C2AO00443 1686 aa15.67■□□□□ 0.1
C9orf47-201ENST00000334490 TTLL13PA6NNM8 815 aa15.66■□□□□ 0.1
C9orf47-201ENST00000334490 BTBD19C9JJ37 291 aa15.66■□□□□ 0.1
C9orf47-201ENST00000334490 ZNF197O14709 1029 aa15.66■□□□□ 0.1
C9orf47-201ENST00000334490 USP2O75604 605 aaPredicted RBP15.66■□□□□ 0.1
C9orf47-201ENST00000334490 AMHP03971 560 aa15.66■□□□□ 0.1
C9orf47-201ENST00000334490 UGP2Q16851 508 aa15.66■□□□□ 0.1
C9orf47-201ENST00000334490 ACAD11Q709F0 780 aa15.66■□□□□ 0.1
C9orf47-201ENST00000334490 SLC35C1Q96A29 364 aa15.66■□□□□ 0.1
C9orf47-201ENST00000334490 PGLYRP2Q96PD5 576 aa15.66■□□□□ 0.1
C9orf47-201ENST00000334490 TUBB6Q9BUF5 446 aa15.66■□□□□ 0.1
C9orf47-201ENST00000334490 CHMP2BQ9UQN3 213 aa15.66■□□□□ 0.1
C9orf47-201ENST00000334490 PCDHB5Q9Y5E4 795 aa15.66■□□□□ 0.1
C9orf47-201ENST00000334490 CYP3A7-CYP3A51PA0A087WV96 503 aa15.66■□□□□ 0.1
C9orf47-201ENST00000334490 ANKRD63C9JTQ0 380 aa15.66■□□□□ 0.1
C9orf47-201ENST00000334490 PMPCBO75439 489 aa15.66■□□□□ 0.1
C9orf47-201ENST00000334490 SMIM10L2AP0DMW4 78 aa15.66■□□□□ 0.1
C9orf47-201ENST00000334490 SMIM10L2BP0DMW5 78 aa15.66■□□□□ 0.1
C9orf47-201ENST00000334490 CYP3A7P24462 503 aa15.66■□□□□ 0.1
C9orf47-201ENST00000334490 HADHAP40939 763 aa15.66■□□□□ 0.1
C9orf47-201ENST00000334490 LAMB3Q13751 1172 aa15.66■□□□□ 0.1
C9orf47-201ENST00000334490 FAM110CQ1W6H9 321 aa15.66■□□□□ 0.1
C9orf47-201ENST00000334490 RNF217Q8TC41 542 aa15.66■□□□□ 0.1
C9orf47-201ENST00000334490 GPATCH2LQ9NWQ4 482 aa15.66■□□□□ 0.1
C9orf47-201ENST00000334490 ASTN2O75129 1339 aaPredicted RBP15.66■□□□□ 0.1
C9orf47-201ENST00000334490 SPAG7O75391 227 aa15.66■□□□□ 0.1
C9orf47-201ENST00000334490 TADA3O75528 432 aa15.66■□□□□ 0.1
C9orf47-201ENST00000334490 GFAPP14136 432 aa15.66■□□□□ 0.1
C9orf47-201ENST00000334490 SLFN11Q7Z7L1 901 aa15.66■□□□□ 0.1
C9orf47-201ENST00000334490 SLC13A5Q86YT5 568 aaPredicted RBP15.66■□□□□ 0.1
C9orf47-201ENST00000334490 PPP1R2P1Q96PQ5 205 aa15.66■□□□□ 0.1
C9orf47-201ENST00000334490 ZSWIM1Q9BR11 485 aa15.66■□□□□ 0.1
C9orf47-201ENST00000334490 LATS2Q9NRM7 1088 aa15.66■□□□□ 0.1
C9orf47-201ENST00000334490 DPP7Q9UHL4 492 aa15.66■□□□□ 0.1
C9orf47-201ENST00000334490 CDY2AQ9Y6F7 541 aa15.66■□□□□ 0.1
C9orf47-201ENST00000334490 CNTNAP2Q9UHC6 1331 aa15.66■□□□□ 0.1
C9orf47-201ENST00000334490 SPATA31C2B4DYI2 1134 aa15.66■□□□□ 0.1
C9orf47-201ENST00000334490 TISP43B9A030 160 aa15.66■□□□□ 0.1
C9orf47-201ENST00000334490 GOLGA8RI6L899 631 aa15.66■□□□□ 0.1
C9orf47-201ENST00000334490 SMIM24O75264 130 aa15.66■□□□□ 0.1
C9orf47-201ENST00000334490 LSM8O95777 96 aaKnown RBP15.66■□□□□ 0.1
C9orf47-201ENST00000334490 SETSIPP0DME0 302 aa15.66■□□□□ 0.1
C9orf47-201ENST00000334490 GYS2P54840 703 aa15.66■□□□□ 0.1
C9orf47-201ENST00000334490 CDH8P55286 799 aa15.66■□□□□ 0.1
C9orf47-201ENST00000334490 IKBKEQ14164 716 aa15.66■□□□□ 0.1
C9orf47-201ENST00000334490 ZNF606Q8WXB4 792 aa15.66■□□□□ 0.1
C9orf47-201ENST00000334490 RMDN2Q96LZ7 410 aa15.66■□□□□ 0.1
C9orf47-201ENST00000334490 CNPY3Q9BT09 278 aa15.66■□□□□ 0.1
C9orf47-201ENST00000334490 PACSIN1Q9BY11 444 aa15.66■□□□□ 0.1
C9orf47-201ENST00000334490 RNF19AQ9NV58 838 aa15.66■□□□□ 0.1
C9orf47-201ENST00000334490 TSPAN16Q9UKR8 245 aa15.66■□□□□ 0.1
C9orf47-201ENST00000334490 TLR2O60603 784 aa15.65■□□□□ 0.1
C9orf47-201ENST00000334490 FGRP09769 529 aa15.65■□□□□ 0.1
C9orf47-201ENST00000334490 MYL4P12829 197 aa15.65■□□□□ 0.1
C9orf47-201ENST00000334490 GLRA2P23416 452 aa15.65■□□□□ 0.1
C9orf47-201ENST00000334490 PTGER2P43116 358 aa15.65■□□□□ 0.1
C9orf47-201ENST00000334490 KCNA1Q09470 495 aa15.65■□□□□ 0.1
C9orf47-201ENST00000334490 KIAA0319LQ8IZA0 1049 aa15.65■□□□□ 0.1
C9orf47-201ENST00000334490 USP38Q8NB14 1042 aa15.65■□□□□ 0.1
C9orf47-201ENST00000334490 COG1Q8WTW3 980 aa15.65■□□□□ 0.1
C9orf47-201ENST00000334490 RXFP2Q8WXD0 754 aa15.65■□□□□ 0.1
C9orf47-201ENST00000334490 CINPQ9BW66 212 aaPredicted RBP15.65■□□□□ 0.1
C9orf47-201ENST00000334490 PDGFDQ9GZP0 370 aaPredicted RBP15.65■□□□□ 0.1
C9orf47-201ENST00000334490 VCX3AQ9NNX9 186 aa15.65■□□□□ 0.1
C9orf47-201ENST00000334490 ARHGEF38Q9NXL2 777 aa15.65■□□□□ 0.1
C9orf47-201ENST00000334490 BCL9LQ86UU0 1499 aa15.65■□□□□ 0.1
C9orf47-201ENST00000334490 PLA2G6O60733 806 aa15.65■□□□□ 0.1
C9orf47-201ENST00000334490 PPP2R2AP63151 447 aa15.65■□□□□ 0.1
C9orf47-201ENST00000334490 CENPCQ03188 943 aa15.65■□□□□ 0.1
C9orf47-201ENST00000334490 LRRC14Q15048 493 aa15.65■□□□□ 0.1
C9orf47-201ENST00000334490 RABGAP1LQ5R372 815 aa15.65■□□□□ 0.1
C9orf47-201ENST00000334490 ZNF571Q7Z3V5 609 aaPredicted RBP15.65■□□□□ 0.1
C9orf47-201ENST00000334490 ABRAQ8N0Z2 381 aa15.65■□□□□ 0.1
C9orf47-201ENST00000334490 TFB1MQ8WVM0 346 aaKnown RBP15.65■□□□□ 0.1
C9orf47-201ENST00000334490 CELF4Q9BZC1 486 aaKnown RBP15.65■□□□□ 0.1
C9orf47-201ENST00000334490 TXLNGQ9NUQ3 528 aa15.65■□□□□ 0.1
C9orf47-201ENST00000334490 SLC13A4Q9UKG4 626 aa15.65■□□□□ 0.1
C9orf47-201ENST00000334490 ZNF263O14978 683 aa15.65■□□□□ 0.1
C9orf47-201ENST00000334490 SARSP49591 514 aaKnown RBP15.65■□□□□ 0.1
C9orf47-201ENST00000334490 LBRQ14739 615 aaKnown RBP15.65■□□□□ 0.1
C9orf47-201ENST00000334490 NAPEPLDQ6IQ20 393 aa15.65■□□□□ 0.1
C9orf47-201ENST00000334490 DDI1Q8WTU0 396 aa15.65■□□□□ 0.1
C9orf47-201ENST00000334490 PHLPP1O60346 1717 aa15.65■□□□□ 0.1
C9orf47-201ENST00000334490 ASS1P00966 412 aaKnown RBP15.65■□□□□ 0.1
C9orf47-201ENST00000334490 HIST1H2AGP0C0S8 130 aaPredicted RBP15.65■□□□□ 0.1
C9orf47-201ENST00000334490 HIST1H2ADP20671 130 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms