RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 ARF4P18085 180 aaPredicted RBP19.92■□□□□ 0.78
RFTN1-201ENST00000334133 ADCYAP1R1P41586 468 aa19.92■□□□□ 0.78
RFTN1-201ENST00000334133 VCPP55072 806 aaKnown RBP19.92■□□□□ 0.78
RFTN1-201ENST00000334133 YWHAEP62258 255 aaKnown RBP19.92■□□□□ 0.78
RFTN1-201ENST00000334133 SURF1Q15526 300 aa19.92■□□□□ 0.78
RFTN1-201ENST00000334133 ANKRD22Q5VYY1 191 aa19.92■□□□□ 0.78
RFTN1-201ENST00000334133 MAP1SQ66K74 1059 aaPredicted RBP19.92■□□□□ 0.78
RFTN1-201ENST00000334133 ZCCHC9Q8N567 271 aaKnown RBP19.92■□□□□ 0.78
RFTN1-201ENST00000334133 HAUS2Q9NVX0 235 aa19.92■□□□□ 0.78
RFTN1-201ENST00000334133 ERAP1Q9NZ08 941 aa19.92■□□□□ 0.78
RFTN1-201ENST00000334133 TNFSF13BQ9Y275 285 aa19.92■□□□□ 0.78
RFTN1-201ENST00000334133 RASA4BC9J798 803 aa19.92■□□□□ 0.78
RFTN1-201ENST00000334133 RASA4O43374 803 aa19.92■□□□□ 0.78
RFTN1-201ENST00000334133 MICAL2O94851 1124 aa19.92■□□□□ 0.78
RFTN1-201ENST00000334133 LGALS2P05162 132 aa19.92■□□□□ 0.78
RFTN1-201ENST00000334133 GJA5P36382 358 aa19.92■□□□□ 0.78
RFTN1-201ENST00000334133 SLC25A11Q02978 314 aaKnown RBP19.92■□□□□ 0.78
RFTN1-201ENST00000334133 MMRN1Q13201 1228 aa19.92■□□□□ 0.78
RFTN1-201ENST00000334133 CCT6BQ92526 530 aa19.92■□□□□ 0.78
RFTN1-201ENST00000334133 TPX2Q9ULW0 747 aaKnown RBP19.92■□□□□ 0.78
RFTN1-201ENST00000334133 CXCL11O14625 94 aa19.91■□□□□ 0.78
RFTN1-201ENST00000334133 RGS7P49802 495 aa19.91■□□□□ 0.78
RFTN1-201ENST00000334133 PTPN11Q06124 597 aaPredicted RBP19.91■□□□□ 0.78
RFTN1-201ENST00000334133 SLC20A2Q08357 652 aa19.91■□□□□ 0.78
RFTN1-201ENST00000334133 PDIA2Q13087 525 aaKnown RBP19.91■□□□□ 0.78
RFTN1-201ENST00000334133 OASLQ15646 514 aaKnown RBP19.91■□□□□ 0.78
RFTN1-201ENST00000334133 SLC10A6Q3KNW5 377 aa19.91■□□□□ 0.78
RFTN1-201ENST00000334133 XYLT1Q86Y38 959 aa19.91■□□□□ 0.78
RFTN1-201ENST00000334133 NLRP7Q8WX94 980 aa19.91■□□□□ 0.78
RFTN1-201ENST00000334133 ZNF518BQ9C0D4 1074 aa19.91■□□□□ 0.78
RFTN1-201ENST00000334133 ABCF3Q9NUQ8 709 aa19.91■□□□□ 0.78
RFTN1-201ENST00000334133 ATXN2Q99700 1313 aaKnown RBP19.91■□□□□ 0.78
RFTN1-201ENST00000334133 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.91■□□□□ 0.78
RFTN1-201ENST00000334133 C3orf70A6NLC5 250 aaPredicted RBP19.91■□□□□ 0.78
RFTN1-201ENST00000334133 SCTRP47872 440 aa19.91■□□□□ 0.78
RFTN1-201ENST00000334133 C4orf33Q8N1A6 199 aa19.91■□□□□ 0.78
RFTN1-201ENST00000334133 PDZD7Q9H5P4 517 aa19.91■□□□□ 0.78
RFTN1-201ENST00000334133 SIGLEC16A6NMB1 481 aa19.9■□□□□ 0.78
RFTN1-201ENST00000334133 GAS2O43903 313 aaKnown RBP19.9■□□□□ 0.78
RFTN1-201ENST00000334133 ARHGAP1Q07960 439 aa19.9■□□□□ 0.78
RFTN1-201ENST00000334133 FAM102AQ5T9C2 384 aaPredicted RBP19.9■□□□□ 0.78
RFTN1-201ENST00000334133 NPNTQ6UXI9 565 aa19.9■□□□□ 0.78
RFTN1-201ENST00000334133 PIGWQ7Z7B1 504 aa19.9■□□□□ 0.78
RFTN1-201ENST00000334133 KCTD6Q8NC69 237 aa19.9■□□□□ 0.78
RFTN1-201ENST00000334133 BBOF1Q8ND07 529 aa19.9■□□□□ 0.78
RFTN1-201ENST00000334133 A0A0G2JMZ2 1700 aa19.9■□□□□ 0.78
RFTN1-201ENST00000334133 ANK1P16157 1881 aa19.9■□□□□ 0.78
RFTN1-201ENST00000334133 ASAP2O43150 1006 aa19.9■□□□□ 0.78
RFTN1-201ENST00000334133 MIPP30301 263 aa19.9■□□□□ 0.78
RFTN1-201ENST00000334133 CDH5P33151 784 aaPredicted RBP19.9■□□□□ 0.78
RFTN1-201ENST00000334133 EFTUD2Q15029 972 aaKnown RBP eCLIP19.9■□□□□ 0.78
RFTN1-201ENST00000334133 C15orf59Q2T9L4 293 aaPredicted RBP19.9■□□□□ 0.78
RFTN1-201ENST00000334133 FAM47EQ6ZV65 393 aa19.9■□□□□ 0.78
RFTN1-201ENST00000334133 RFX6Q8HWS3 928 aa19.9■□□□□ 0.78
RFTN1-201ENST00000334133 HPDLQ96IR7 371 aa19.9■□□□□ 0.78
RFTN1-201ENST00000334133 GGA2Q9UJY4 613 aa19.9■□□□□ 0.78
RFTN1-201ENST00000334133 TCRBV7S3A2A0A539 114 aa19.89■□□□□ 0.78
RFTN1-201ENST00000334133 CCT8L1PA6NM43 557 aa19.89■□□□□ 0.78
RFTN1-201ENST00000334133 CDH16O75309 829 aa19.89■□□□□ 0.78
RFTN1-201ENST00000334133 OSBPP22059 807 aa19.89■□□□□ 0.78
RFTN1-201ENST00000334133 GCAP28676 217 aa19.89■□□□□ 0.78
RFTN1-201ENST00000334133 STX2P32856 288 aa19.89■□□□□ 0.78
RFTN1-201ENST00000334133 PHKA2P46019 1235 aa19.89■□□□□ 0.78
RFTN1-201ENST00000334133 AMHR2Q16671 573 aa19.89■□□□□ 0.78
RFTN1-201ENST00000334133 LPIN3Q9BQK8 851 aa19.89■□□□□ 0.78
RFTN1-201ENST00000334133 MAF1Q9H063 256 aa19.89■□□□□ 0.78
RFTN1-201ENST00000334133 LRRC37A2A6NM11 1700 aa19.89■□□□□ 0.78
RFTN1-201ENST00000334133 KDELR1P24390 212 aa19.89■□□□□ 0.77
RFTN1-201ENST00000334133 LMNB2Q03252 620 aa19.89■□□□□ 0.77
RFTN1-201ENST00000334133 PKN2Q16513 984 aaKnown RBP19.89■□□□□ 0.77
RFTN1-201ENST00000334133 MSS51Q4VC12 460 aa19.89■□□□□ 0.77
RFTN1-201ENST00000334133 LRRC38Q5VT99 294 aa19.89■□□□□ 0.77
RFTN1-201ENST00000334133 PPP1R2P3Q6NXS1 205 aa19.89■□□□□ 0.77
RFTN1-201ENST00000334133 ARMC9Q7Z3E5 817 aa19.89■□□□□ 0.77
RFTN1-201ENST00000334133 ZC3H18Q86VM9 953 aaKnown RBP19.89■□□□□ 0.77
RFTN1-201ENST00000334133 UNC45BQ8IWX7 931 aa19.89■□□□□ 0.77
RFTN1-201ENST00000334133 CNPY4Q8N129 248 aa19.89■□□□□ 0.77
RFTN1-201ENST00000334133 ANKS4BQ8N8V4 417 aa19.89■□□□□ 0.77
RFTN1-201ENST00000334133 FAM71DQ8N9W8 422 aa19.89■□□□□ 0.77
RFTN1-201ENST00000334133 TMEM176AQ96HP8 235 aa19.89■□□□□ 0.77
RFTN1-201ENST00000334133 CCDC77Q9BR77 488 aa19.89■□□□□ 0.77
RFTN1-201ENST00000334133 BCO2Q9BYV7 579 aa19.89■□□□□ 0.77
RFTN1-201ENST00000334133 SLC40A1Q9NP59 571 aa19.89■□□□□ 0.77
RFTN1-201ENST00000334133 STRIP2Q9ULQ0 834 aa19.89■□□□□ 0.77
RFTN1-201ENST00000334133 SSTR1P30872 391 aa19.89■□□□□ 0.77
RFTN1-201ENST00000334133 CTCFP49711 727 aaPredicted RBP19.89■□□□□ 0.77
RFTN1-201ENST00000334133 NDST1P52848 882 aa19.89■□□□□ 0.77
RFTN1-201ENST00000334133 ATP11AP98196 1134 aa19.89■□□□□ 0.77
RFTN1-201ENST00000334133 RNASEH2BQ5TBB1 312 aaKnown RBP19.89■□□□□ 0.77
RFTN1-201ENST00000334133 ILDR2Q71H61 639 aa19.89■□□□□ 0.77
RFTN1-201ENST00000334133 SPOCK2Q92563 424 aa19.89■□□□□ 0.77
RFTN1-201ENST00000334133 MED7O43513 233 aa19.88■□□□□ 0.77
RFTN1-201ENST00000334133 CILPO75339 1184 aa19.88■□□□□ 0.77
RFTN1-201ENST00000334133 KRT15P19012 456 aa19.88■□□□□ 0.77
RFTN1-201ENST00000334133 CYP3A5P20815 502 aa19.88■□□□□ 0.77
RFTN1-201ENST00000334133 ADPGKQ9BRR6 497 aa19.88■□□□□ 0.77
RFTN1-201ENST00000334133 PRMT7Q9NVM4 692 aaPredicted RBP19.88■□□□□ 0.77
RFTN1-201ENST00000334133 DDX56Q9NY93 547 aaKnown RBP19.88■□□□□ 0.77
RFTN1-201ENST00000334133 HES2Q9Y543 173 aa19.88■□□□□ 0.77
RFTN1-201ENST00000334133 IBSPP21815 317 aaPredicted RBP19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms