RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 NBPF20Q3BBV1 942 aa11.73□□□□□ -0.53
POLR1B-202ENST00000333990 GJC2Q5T442 439 aaPredicted RBP11.73□□□□□ -0.53
POLR1B-202ENST00000333990 MIB1Q86YT6 1006 aa11.73□□□□□ -0.53
POLR1B-202ENST00000333990 KIAA0319LQ8IZA0 1049 aa11.73□□□□□ -0.53
POLR1B-202ENST00000333990 SPDYE1Q8NFV5 336 aaPredicted RBP11.73□□□□□ -0.53
POLR1B-202ENST00000333990 ZNF558Q96NG5 402 aa11.73□□□□□ -0.53
POLR1B-202ENST00000333990 VCXQ9H320 206 aa11.73□□□□□ -0.53
POLR1B-202ENST00000333990 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.73□□□□□ -0.53
POLR1B-202ENST00000333990 ZFATQ9P243 1243 aa11.73□□□□□ -0.53
POLR1B-202ENST00000333990 VAV3Q9UKW4 847 aa11.73□□□□□ -0.53
POLR1B-202ENST00000333990 ATMINO43313 823 aaPredicted RBP11.73□□□□□ -0.53
POLR1B-202ENST00000333990 RTN3O95197 1032 aaPredicted RBP11.73□□□□□ -0.53
POLR1B-202ENST00000333990 SPARCL1Q14515 664 aa11.73□□□□□ -0.53
POLR1B-202ENST00000333990 ZNF268Q14587 947 aaPredicted RBP11.73□□□□□ -0.53
POLR1B-202ENST00000333990 MMEL1Q495T6 779 aa11.73□□□□□ -0.53
POLR1B-202ENST00000333990 ANO5Q75V66 913 aa11.73□□□□□ -0.53
POLR1B-202ENST00000333990 TPCN2Q8NHX9 752 aa11.73□□□□□ -0.53
POLR1B-202ENST00000333990 CDT1Q9H211 546 aa11.73□□□□□ -0.53
POLR1B-202ENST00000333990 RNPEPQ9H4A4 650 aa11.73□□□□□ -0.53
POLR1B-202ENST00000333990 ZCCHC17Q9NP64 241 aaKnown RBP11.73□□□□□ -0.53
POLR1B-202ENST00000333990 PDGFCQ9NRA1 345 aa11.73□□□□□ -0.53
POLR1B-202ENST00000333990 RASA4BC9J798 803 aa11.72□□□□□ -0.53
POLR1B-202ENST00000333990 RASA4O43374 803 aa11.72□□□□□ -0.53
POLR1B-202ENST00000333990 SNX2O60749 519 aa11.72□□□□□ -0.53
POLR1B-202ENST00000333990 SPAG6O75602 509 aa11.72□□□□□ -0.53
POLR1B-202ENST00000333990 PNMA6AP0CW24 399 aaPredicted RBP11.72□□□□□ -0.53
POLR1B-202ENST00000333990 NR1D1P20393 614 aa11.72□□□□□ -0.53
POLR1B-202ENST00000333990 RPL9P32969 192 aaKnown RBP11.72□□□□□ -0.53
POLR1B-202ENST00000333990 CLCN6P51797 869 aa11.72□□□□□ -0.53
POLR1B-202ENST00000333990 UNC45BQ8IWX7 931 aa11.72□□□□□ -0.53
POLR1B-202ENST00000333990 DCUN1D1Q96GG9 259 aa11.72□□□□□ -0.53
POLR1B-202ENST00000333990 PPCSQ9HAB8 311 aa11.72□□□□□ -0.53
POLR1B-202ENST00000333990 TSPAN16Q9UKR8 245 aa11.72□□□□□ -0.53
POLR1B-202ENST00000333990 PLAAQ9Y263 795 aa11.72□□□□□ -0.53
POLR1B-202ENST00000333990 GIT1Q9Y2X7 761 aa11.72□□□□□ -0.53
POLR1B-202ENST00000333990 SLC30A1Q9Y6M5 507 aa11.72□□□□□ -0.53
POLR1B-202ENST00000333990 ANKRD63C9JTQ0 380 aa11.72□□□□□ -0.53
POLR1B-202ENST00000333990 XYLBO75191 536 aa11.72□□□□□ -0.53
POLR1B-202ENST00000333990 SEC31AO94979 1220 aaKnown RBP11.72□□□□□ -0.53
POLR1B-202ENST00000333990 TKTL1P51854 596 aa11.72□□□□□ -0.53
POLR1B-202ENST00000333990 PMS1P54277 932 aaKnown RBP11.72□□□□□ -0.53
POLR1B-202ENST00000333990 MAP3K7CLP57077 242 aa11.72□□□□□ -0.53
POLR1B-202ENST00000333990 CREMQ03060 361 aa11.72□□□□□ -0.53
POLR1B-202ENST00000333990 ADCY1Q08828 1119 aa11.72□□□□□ -0.53
POLR1B-202ENST00000333990 ARHGEF7Q14155 803 aa11.72□□□□□ -0.53
POLR1B-202ENST00000333990 STAT4Q14765 748 aa11.72□□□□□ -0.53
POLR1B-202ENST00000333990 RBBP5Q15291 538 aaKnown RBP11.72□□□□□ -0.53
POLR1B-202ENST00000333990 NAPEPLDQ6IQ20 393 aa11.72□□□□□ -0.53
POLR1B-202ENST00000333990 SLFN11Q7Z7L1 901 aa11.72□□□□□ -0.53
POLR1B-202ENST00000333990 DCLK2Q8N568 766 aa11.72□□□□□ -0.53
POLR1B-202ENST00000333990 TATDN2Q93075 761 aa11.72□□□□□ -0.53
POLR1B-202ENST00000333990 SENP8Q96LD8 212 aa11.72□□□□□ -0.53
POLR1B-202ENST00000333990 CYTH2Q99418 400 aa11.72□□□□□ -0.53
POLR1B-202ENST00000333990 SENP1Q9P0U3 644 aa11.72□□□□□ -0.53
POLR1B-202ENST00000333990 H0Y626 953 aa11.72□□□□□ -0.53
POLR1B-202ENST00000333990 MAP3K7O43318 606 aa11.72□□□□□ -0.53
POLR1B-202ENST00000333990 ATP9BO43861 1147 aa11.72□□□□□ -0.53
POLR1B-202ENST00000333990 HSPA8P11142 646 aaKnown RBP11.72□□□□□ -0.53
POLR1B-202ENST00000333990 ELNP15502 786 aa11.72□□□□□ -0.53
POLR1B-202ENST00000333990 KLRC2P26717 231 aa11.72□□□□□ -0.53
POLR1B-202ENST00000333990 PPM1AP35813 382 aa11.72□□□□□ -0.53
POLR1B-202ENST00000333990 IFNL1Q8IU54 200 aa11.72□□□□□ -0.53
POLR1B-202ENST00000333990 CLEC4DQ8WXI8 215 aa11.72□□□□□ -0.53
POLR1B-202ENST00000333990 BRI3BPQ8WY22 251 aa11.72□□□□□ -0.53
POLR1B-202ENST00000333990 TBCBQ99426 244 aa11.72□□□□□ -0.53
POLR1B-202ENST00000333990 ACO2Q99798 780 aaKnown RBP11.72□□□□□ -0.53
POLR1B-202ENST00000333990 IRX2Q9BZI1 471 aaPredicted RBP11.72□□□□□ -0.53
POLR1B-202ENST00000333990 FAM129AQ9BZQ8 928 aa11.72□□□□□ -0.53
POLR1B-202ENST00000333990 LRRIQ3A6PVS8 624 aaPredicted RBP11.72□□□□□ -0.53
POLR1B-202ENST00000333990 ANXA9O76027 345 aa11.72□□□□□ -0.53
POLR1B-202ENST00000333990 KCNA2P16389 499 aa11.72□□□□□ -0.53
POLR1B-202ENST00000333990 SESN2P58004 480 aaPredicted RBP11.72□□□□□ -0.53
POLR1B-202ENST00000333990 WDR75Q8IWA0 830 aaKnown RBP11.72□□□□□ -0.53
POLR1B-202ENST00000333990 CCDC197Q8NCU1 140 aa11.72□□□□□ -0.53
POLR1B-202ENST00000333990 CALML6Q8TD86 181 aa11.72□□□□□ -0.53
POLR1B-202ENST00000333990 MTMR8Q96EF0 704 aa11.72□□□□□ -0.53
POLR1B-202ENST00000333990 ZSWIM1Q9BR11 485 aa11.72□□□□□ -0.53
POLR1B-202ENST00000333990 VPS11Q9H270 941 aa11.72□□□□□ -0.53
POLR1B-202ENST00000333990 ST3GAL5Q9UNP4 418 aa11.72□□□□□ -0.53
POLR1B-202ENST00000333990 SF3B1O75533 1304 aaKnown RBP eCLIP11.71□□□□□ -0.539e-6■■■■■ 68.9
POLR1B-202ENST00000333990 PROSCO94903 275 aa11.71□□□□□ -0.53
POLR1B-202ENST00000333990 RRM1P23921 792 aa11.71□□□□□ -0.53
POLR1B-202ENST00000333990 DNAJB2P25686 324 aa11.71□□□□□ -0.53
POLR1B-202ENST00000333990 NCKAP1LP55160 1127 aa11.71□□□□□ -0.53
POLR1B-202ENST00000333990 IRX4P78413 519 aa11.71□□□□□ -0.53
POLR1B-202ENST00000333990 MAPK8IP2Q13387 824 aaPredicted RBP11.71□□□□□ -0.53
POLR1B-202ENST00000333990 BMT2Q1RMZ1 405 aa11.71□□□□□ -0.53
POLR1B-202ENST00000333990 CLEC16AQ2KHT3 1053 aa11.71□□□□□ -0.53
POLR1B-202ENST00000333990 NOMO2Q5JPE7 1267 aa11.71□□□□□ -0.53
POLR1B-202ENST00000333990 TIGD7Q6NT04 549 aaPredicted RBP11.71□□□□□ -0.53
POLR1B-202ENST00000333990 TRIM67Q6ZTA4 783 aa11.71□□□□□ -0.53
POLR1B-202ENST00000333990 TAS2R42Q7RTR8 314 aa11.71□□□□□ -0.53
POLR1B-202ENST00000333990 ZNF467Q7Z7K2 595 aaPredicted RBP11.71□□□□□ -0.53
POLR1B-202ENST00000333990 RIN2Q8WYP3 895 aaPredicted RBP11.71□□□□□ -0.53
POLR1B-202ENST00000333990 AGAP3Q96P47 875 aa11.71□□□□□ -0.53
POLR1B-202ENST00000333990 RBPJLQ9UBG7 517 aa11.71□□□□□ -0.53
POLR1B-202ENST00000333990 RGPD5Q99666 1765 aa11.71□□□□□ -0.53
POLR1B-202ENST00000333990 MOXD2PA6NHM9 499 aa11.71□□□□□ -0.53
POLR1B-202ENST00000333990 LRRC10BA6NIK2 292 aa11.71□□□□□ -0.53
POLR1B-202ENST00000333990 CFAP99D6REC4 459 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms