RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 WDR83Q9BRX9 315 aaKnown RBP24.79■■□□□ 1.56
TSKU-201ENST00000333090 TAS2R1Q9NYW7 299 aa24.79■■□□□ 1.56
TSKU-201ENST00000333090 C2CD2Q9Y426 696 aa24.79■■□□□ 1.56
TSKU-201ENST00000333090 ASB3Q9Y575 518 aa24.79■■□□□ 1.56
TSKU-201ENST00000333090 EXTL3O43909 919 aa24.78■■□□□ 1.56
TSKU-201ENST00000333090 LPXNO60711 386 aa24.78■■□□□ 1.56
TSKU-201ENST00000333090 ESRRAP11474 423 aaPredicted RBP24.78■■□□□ 1.56
TSKU-201ENST00000333090 RXRBP28702 533 aa24.78■■□□□ 1.56
TSKU-201ENST00000333090 CAP2P40123 477 aa24.78■■□□□ 1.56
TSKU-201ENST00000333090 OGDHQ02218 1023 aa24.78■■□□□ 1.56
TSKU-201ENST00000333090 BBS9Q3SYG4 887 aa24.78■■□□□ 1.56
TSKU-201ENST00000333090 CCDC62Q6P9F0 684 aa24.78■■□□□ 1.56
TSKU-201ENST00000333090 TAS1R3Q7RTX0 852 aa24.78■■□□□ 1.56
TSKU-201ENST00000333090 PPIL6Q8IXY8 311 aa24.78■■□□□ 1.56
TSKU-201ENST00000333090 SAMD3Q8N6K7 520 aa24.78■■□□□ 1.56
TSKU-201ENST00000333090 SYTL5Q8TDW5 730 aaPredicted RBP24.78■■□□□ 1.56
TSKU-201ENST00000333090 SDAD1Q9NVU7 687 aaKnown RBP eCLIP24.78■■□□□ 1.56
TSKU-201ENST00000333090 SCOCQ9UIL1 159 aa24.78■■□□□ 1.56
TSKU-201ENST00000333090 PLA2G6O60733 806 aa24.78■■□□□ 1.56
TSKU-201ENST00000333090 MMP8P22894 467 aa24.78■■□□□ 1.56
TSKU-201ENST00000333090 CDKN2BP42772 138 aa24.78■■□□□ 1.56
TSKU-201ENST00000333090 CDK16Q00536 496 aa24.78■■□□□ 1.56
TSKU-201ENST00000333090 OCRLQ01968 901 aa24.78■■□□□ 1.56
TSKU-201ENST00000333090 RBBP5Q15291 538 aaKnown RBP24.78■■□□□ 1.56
TSKU-201ENST00000333090 DCAKDQ8WVC6 231 aa24.78■■□□□ 1.56
TSKU-201ENST00000333090 TTC17Q96AE7 1141 aa24.78■■□□□ 1.56
TSKU-201ENST00000333090 SKA1Q96BD8 255 aa24.78■■□□□ 1.56
TSKU-201ENST00000333090 SYNCQ9H7C4 482 aa24.78■■□□□ 1.56
TSKU-201ENST00000333090 KCNK13Q9HB14 408 aa24.78■■□□□ 1.56
TSKU-201ENST00000333090 GINM1Q9NU53 330 aa24.78■■□□□ 1.56
TSKU-201ENST00000333090 TMOD2Q9NZR1 351 aa24.78■■□□□ 1.56
TSKU-201ENST00000333090 PSMD6Q15008 389 aa24.77■■□□□ 1.56
TSKU-201ENST00000333090 DNAJC24Q6P3W2 148 aa24.77■■□□□ 1.56
TSKU-201ENST00000333090 RFX8Q6ZV50 586 aa24.77■■□□□ 1.56
TSKU-201ENST00000333090 ALKBH8Q96BT7 664 aaKnown RBP24.77■■□□□ 1.56
TSKU-201ENST00000333090 SNUPNO95149 360 aaKnown RBP24.77■■□□□ 1.56
TSKU-201ENST00000333090 MT-ND3P03897 115 aa24.77■■□□□ 1.56
TSKU-201ENST00000333090 SFNP31947 248 aa24.77■■□□□ 1.56
TSKU-201ENST00000333090 PCGF5Q86SE9 256 aa24.77■■□□□ 1.56
TSKU-201ENST00000333090 APLFQ8IW19 511 aaPredicted RBP24.77■■□□□ 1.56
TSKU-201ENST00000333090 PDCD7Q8N8D1 485 aaKnown RBP24.77■■□□□ 1.56
TSKU-201ENST00000333090 ZNF606Q8WXB4 792 aa24.77■■□□□ 1.56
TSKU-201ENST00000333090 FAM111AQ96PZ2 611 aa24.77■■□□□ 1.56
TSKU-201ENST00000333090 DHRS4Q9BTZ2 278 aa24.77■■□□□ 1.56
TSKU-201ENST00000333090 TMEM39BQ9GZU3 492 aa24.77■■□□□ 1.56
TSKU-201ENST00000333090 ARMCX1Q9P291 453 aa24.77■■□□□ 1.56
TSKU-201ENST00000333090 FETUBQ9UGM5 382 aa24.77■■□□□ 1.56
TSKU-201ENST00000333090 AGTPBP1Q9UPW5 1226 aa24.77■■□□□ 1.56
TSKU-201ENST00000333090 MTO1Q9Y2Z2 717 aaKnown RBP24.77■■□□□ 1.56
TSKU-201ENST00000333090 SNCAIPQ9Y6H5 919 aa24.77■■□□□ 1.56
TSKU-201ENST00000333090 MYH9P35579 1960 aaKnown RBP24.77■■□□□ 1.56
TSKU-201ENST00000333090 NDC80O14777 642 aa24.77■■□□□ 1.56
TSKU-201ENST00000333090 AP1G2O75843 785 aa24.77■■□□□ 1.56
TSKU-201ENST00000333090 PTGER2P43116 358 aa24.77■■□□□ 1.56
TSKU-201ENST00000333090 KRT76Q01546 638 aa24.77■■□□□ 1.56
TSKU-201ENST00000333090 LRRC38Q5VT99 294 aa24.77■■□□□ 1.56
TSKU-201ENST00000333090 MCF2L2Q86YR7 1114 aa24.77■■□□□ 1.56
TSKU-201ENST00000333090 SLC35B2Q8TB61 432 aa24.77■■□□□ 1.56
TSKU-201ENST00000333090 ACTL9Q8TC94 416 aa24.77■■□□□ 1.56
TSKU-201ENST00000333090 GABBR1Q9UBS5 961 aa24.77■■□□□ 1.56
TSKU-201ENST00000333090 NUB1Q9Y5A7 615 aa24.77■■□□□ 1.56
TSKU-201ENST00000333090 BGNP21810 368 aa24.76■■□□□ 1.55
TSKU-201ENST00000333090 CPA2P48052 419 aa24.76■■□□□ 1.55
TSKU-201ENST00000333090 OTUD4Q01804 1114 aaKnown RBP24.76■■□□□ 1.55
TSKU-201ENST00000333090 PGM5Q15124 567 aa24.76■■□□□ 1.55
TSKU-201ENST00000333090 ZC3H12AQ5D1E8 599 aaKnown RBP24.76■■□□□ 1.55
TSKU-201ENST00000333090 OR52E8Q6IFG1 317 aa24.76■■□□□ 1.55
TSKU-201ENST00000333090 PPFIBP2Q8ND30 876 aa24.76■■□□□ 1.55
TSKU-201ENST00000333090 C17orf75Q9HAS0 396 aa24.76■■□□□ 1.55
TSKU-201ENST00000333090 TCRBV7S3A2A0A539 114 aa24.76■■□□□ 1.55
TSKU-201ENST00000333090 CLDN10P78369 228 aa24.76■■□□□ 1.55
TSKU-201ENST00000333090 THOC5Q13769 683 aaKnown RBP24.76■■□□□ 1.55
TSKU-201ENST00000333090 SMTNL2Q2TAL5 461 aa24.76■■□□□ 1.55
TSKU-201ENST00000333090 PHC3Q8NDX5 983 aa24.76■■□□□ 1.55
TSKU-201ENST00000333090 RAVER2Q9HCJ3 691 aaKnown RBP24.76■■□□□ 1.55
TSKU-201ENST00000333090 ZNRF3Q9ULT6 936 aa24.76■■□□□ 1.55
TSKU-201ENST00000333090 PCNTO95613 3336 aa24.75■■□□□ 1.55
TSKU-201ENST00000333090 ZNF862O60290 1169 aa24.75■■□□□ 1.55
TSKU-201ENST00000333090 DLDP09622 509 aaKnown RBP24.75■■□□□ 1.55
TSKU-201ENST00000333090 MYL2P10916 166 aa24.75■■□□□ 1.55
TSKU-201ENST00000333090 RPS6P62753 249 aaKnown RBP24.75■■□□□ 1.55
TSKU-201ENST00000333090 NAT8LQ8N9F0 302 aa24.75■■□□□ 1.55
TSKU-201ENST00000333090 STX18Q9P2W9 335 aaKnown RBP24.75■■□□□ 1.55
TSKU-201ENST00000333090 AGO2Q9UKV8 859 aaKnown RBP24.75■■□□□ 1.55
TSKU-201ENST00000333090 DNAJC6O75061 913 aa24.75■■□□□ 1.55
TSKU-201ENST00000333090 KCNA3P22001 575 aa24.75■■□□□ 1.55
TSKU-201ENST00000333090 SP4Q02446 784 aa24.75■■□□□ 1.55
TSKU-201ENST00000333090 ZRSR2Q15696 482 aaKnown RBP24.75■■□□□ 1.55
TSKU-201ENST00000333090 CHMP2BQ9UQN3 213 aa24.75■■□□□ 1.55
TSKU-201ENST00000333090 CWF19L1Q69YN2 538 aaKnown RBP24.74■■□□□ 1.55
TSKU-201ENST00000333090 RSAD2Q8WXG1 361 aa24.74■■□□□ 1.55
TSKU-201ENST00000333090 PCDHA10Q9Y5I2 948 aa24.74■■□□□ 1.55
TSKU-201ENST00000333090 WASF2Q9Y6W5 498 aa24.74■■□□□ 1.55
TSKU-201ENST00000333090 FCHO1O14526 889 aa24.74■■□□□ 1.55
TSKU-201ENST00000333090 TMEM63AO94886 807 aa24.74■■□□□ 1.55
TSKU-201ENST00000333090 PGM1P36871 562 aa24.74■■□□□ 1.55
TSKU-201ENST00000333090 ERFP50548 548 aa24.74■■□□□ 1.55
TSKU-201ENST00000333090 ENPEPQ07075 957 aa24.74■■□□□ 1.55
TSKU-201ENST00000333090 PRKD1Q15139 912 aaPredicted RBP24.74■■□□□ 1.55
TSKU-201ENST00000333090 PDIK1LQ8N165 341 aa24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms