RNA–Protein interactions for RNA: ENST00000330494.11

CHD3-201, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHD3, Length 7,328 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-201ENST00000330494 ANKS1AQ92625 1134 aa10.61□□□□□ -0.71
CHD3-201ENST00000330494 SLITRK1Q96PX8 696 aa10.61□□□□□ -0.71
CHD3-201ENST00000330494 OSBPL1AQ9BXW6 950 aa10.61□□□□□ -0.71
CHD3-201ENST00000330494 AGLP35573 1532 aa10.6□□□□□ -0.71
CHD3-201ENST00000330494 ZNF263O14978 683 aa10.6□□□□□ -0.71
CHD3-201ENST00000330494 AKAP3O75969 853 aa10.6□□□□□ -0.71
CHD3-201ENST00000330494 CYP11B1P15538 503 aa10.6□□□□□ -0.71
CHD3-201ENST00000330494 BTKQ06187 659 aa10.6□□□□□ -0.71
CHD3-201ENST00000330494 CARNMT1Q8N4J0 409 aa10.6□□□□□ -0.71
CHD3-201ENST00000330494 ZNF669Q96BR6 464 aaPredicted RBP10.6□□□□□ -0.71
CHD3-201ENST00000330494 CEP41Q9BYV8 373 aa10.6□□□□□ -0.71
CHD3-201ENST00000330494 DOLKQ9UPQ8 538 aa10.6□□□□□ -0.71
CHD3-201ENST00000330494 MYO1DO94832 1006 aa10.6□□□□□ -0.71
CHD3-201ENST00000330494 CHRM3P20309 590 aa10.6□□□□□ -0.71
CHD3-201ENST00000330494 EVX2Q03828 476 aa10.6□□□□□ -0.71
CHD3-201ENST00000330494 CDH18Q13634 790 aa10.6□□□□□ -0.71
CHD3-201ENST00000330494 LVRNQ6Q4G3 990 aa10.6□□□□□ -0.71
CHD3-201ENST00000330494 USP38Q8NB14 1042 aa10.6□□□□□ -0.71
CHD3-201ENST00000330494 SLC39A10Q9ULF5 831 aa10.6□□□□□ -0.71
CHD3-201ENST00000330494 HNRNPCL2B2RXH8 293 aa10.6□□□□□ -0.71
CHD3-201ENST00000330494 GPR182O15218 404 aa10.6□□□□□ -0.71
CHD3-201ENST00000330494 HNRNPCL1O60812 293 aaKnown RBP10.6□□□□□ -0.71
CHD3-201ENST00000330494 CALCAP01258 141 aa10.6□□□□□ -0.71
CHD3-201ENST00000330494 ACAT1P24752 427 aaKnown RBP10.6□□□□□ -0.71
CHD3-201ENST00000330494 SLC29A2Q14542 456 aa10.6□□□□□ -0.71
CHD3-201ENST00000330494 NTRK3Q16288 839 aa10.6□□□□□ -0.71
CHD3-201ENST00000330494 PRAMEF19Q5SWL8 479 aa10.6□□□□□ -0.71
CHD3-201ENST00000330494 SHCBP1Q8NEM2 672 aa10.6□□□□□ -0.71
CHD3-201ENST00000330494 YME1L1Q96TA2 773 aa10.6□□□□□ -0.71
CHD3-201ENST00000330494 UBP1Q9NZI7 540 aa10.6□□□□□ -0.71
CHD3-201ENST00000330494 PBLDP30039 288 aaPredicted RBP10.6□□□□□ -0.71
CHD3-201ENST00000330494 Q4G0T1 1027 aa10.6□□□□□ -0.71
CHD3-201ENST00000330494 IFNEQ86WN2 208 aa10.6□□□□□ -0.71
CHD3-201ENST00000330494 PARP9Q8IXQ6 854 aa10.6□□□□□ -0.71
CHD3-201ENST00000330494 FBXO32Q969P5 355 aa10.6□□□□□ -0.71
CHD3-201ENST00000330494 RPRD1AQ96P16 312 aaPredicted RBP10.6□□□□□ -0.71
CHD3-201ENST00000330494 PSMC3IPQ9P2W1 217 aaPredicted RBP10.6□□□□□ -0.71
CHD3-201ENST00000330494 WARS2Q9UGM6 360 aaKnown RBP10.6□□□□□ -0.71
CHD3-201ENST00000330494 LZTS1Q9Y250 596 aa10.6□□□□□ -0.71
CHD3-201ENST00000330494 NCF1BA6NI72 391 aaPredicted RBP10.6□□□□□ -0.71
CHD3-201ENST00000330494 NCF1CA8MVU1 366 aaPredicted RBP10.6□□□□□ -0.71
CHD3-201ENST00000330494 MYL2P10916 166 aa10.6□□□□□ -0.71
CHD3-201ENST00000330494 NCF1P14598 390 aaPredicted RBP10.6□□□□□ -0.71
CHD3-201ENST00000330494 DDR1Q08345 913 aa10.6□□□□□ -0.71
CHD3-201ENST00000330494 STX3Q13277 289 aa10.6□□□□□ -0.71
CHD3-201ENST00000330494 PDK1Q15118 436 aa10.6□□□□□ -0.71
CHD3-201ENST00000330494 LAYNQ6UX15 382 aa10.6□□□□□ -0.71
CHD3-201ENST00000330494 SYDE1Q6ZW31 735 aaPredicted RBP10.6□□□□□ -0.71
CHD3-201ENST00000330494 CINPQ9BW66 212 aaPredicted RBP10.6□□□□□ -0.71
CHD3-201ENST00000330494 RSAD1Q9HA92 442 aa10.6□□□□□ -0.71
CHD3-201ENST00000330494 ARHGAP10A1A4S6 786 aa10.6□□□□□ -0.71
CHD3-201ENST00000330494 MDH1P40925 334 aaKnown RBP10.6□□□□□ -0.71
CHD3-201ENST00000330494 IRX1P78414 480 aaPredicted RBP10.6□□□□□ -0.71
CHD3-201ENST00000330494 TBCCQ15814 346 aa10.6□□□□□ -0.71
CHD3-201ENST00000330494 SPATA21Q7Z572 469 aa10.6□□□□□ -0.71
CHD3-201ENST00000330494 PIH1D1Q9NWS0 290 aaKnown RBP10.6□□□□□ -0.71
CHD3-201ENST00000330494 SENP1Q9P0U3 644 aa10.6□□□□□ -0.71
CHD3-201ENST00000330494 INSRRP14616 1297 aa10.59□□□□□ -0.71
CHD3-201ENST00000330494 ADORA2AP29274 412 aa10.59□□□□□ -0.71
CHD3-201ENST00000330494 CASP7P55210 303 aa10.59□□□□□ -0.71
CHD3-201ENST00000330494 ZNF720Q7Z2F6 126 aa10.59□□□□□ -0.71
CHD3-201ENST00000330494 ZSWIM2Q8NEG5 633 aa10.59□□□□□ -0.71
CHD3-201ENST00000330494 MKNK1Q9BUB5 465 aa10.59□□□□□ -0.71
CHD3-201ENST00000330494 UNKQ9C0B0 810 aaKnown RBP10.59□□□□□ -0.71
CHD3-201ENST00000330494 CAPN10Q9HC96 672 aa10.59□□□□□ -0.71
CHD3-201ENST00000330494 PAK5Q9P286 719 aa10.59□□□□□ -0.71
CHD3-201ENST00000330494 SATB2Q9UPW6 733 aa10.59□□□□□ -0.71
CHD3-201ENST00000330494 SPDYE5A6NIY4 337 aa10.59□□□□□ -0.71
CHD3-201ENST00000330494 VWA5AO00534 786 aa10.59□□□□□ -0.71
CHD3-201ENST00000330494 EFEMP1Q12805 493 aa10.59□□□□□ -0.71
CHD3-201ENST00000330494 SPDYE7PQ495Y7 208 aa10.59□□□□□ -0.71
CHD3-201ENST00000330494 C6orf10Q5SRN2 563 aa10.59□□□□□ -0.71
CHD3-201ENST00000330494 NUDT18Q6ZVK8 323 aa10.59□□□□□ -0.71
CHD3-201ENST00000330494 EDEM1Q92611 657 aa10.59□□□□□ -0.71
CHD3-201ENST00000330494 TMEM169Q96HH4 297 aa10.59□□□□□ -0.71
CHD3-201ENST00000330494 ZBTB45Q96K62 511 aaPredicted RBP10.59□□□□□ -0.71
CHD3-201ENST00000330494 CEP19Q96LK0 163 aa10.59□□□□□ -0.71
CHD3-201ENST00000330494 RIOX1Q9H6W3 641 aa10.59□□□□□ -0.71
CHD3-201ENST00000330494 RUBCNLQ9H714 662 aa10.59□□□□□ -0.71
CHD3-201ENST00000330494 CAPN6Q9Y6Q1 641 aa10.59□□□□□ -0.71
CHD3-201ENST00000330494 SLC26A4O43511 780 aa10.59□□□□□ -0.71
CHD3-201ENST00000330494 MCF2P10911 925 aa10.59□□□□□ -0.71
CHD3-201ENST00000330494 CDH8P55286 799 aa10.59□□□□□ -0.71
CHD3-201ENST00000330494 CCDC157Q569K6 752 aa10.59□□□□□ -0.71
CHD3-201ENST00000330494 ZNF484Q5JVG2 852 aa10.59□□□□□ -0.71
CHD3-201ENST00000330494 TTI2Q6NXR4 508 aa10.59□□□□□ -0.71
CHD3-201ENST00000330494 XRRA1Q6P2D8 792 aa10.59□□□□□ -0.71
CHD3-201ENST00000330494 FAM131BQ86XD5 332 aa10.59□□□□□ -0.71
CHD3-201ENST00000330494 KIAA0895Q8NCT3 520 aa10.59□□□□□ -0.71
CHD3-201ENST00000330494 ERGIC2Q96RQ1 377 aa10.59□□□□□ -0.71
CHD3-201ENST00000330494 P2RX7Q99572 595 aaKnown RBP10.59□□□□□ -0.71
CHD3-201ENST00000330494 MROH8Q9H579 483 aa10.59□□□□□ -0.71
CHD3-201ENST00000330494 UBQLN1Q9UMX0 589 aaKnown RBP10.59□□□□□ -0.71
CHD3-201ENST00000330494 H3BRB1 525 aa10.59□□□□□ -0.71
CHD3-201ENST00000330494 AIM2O14862 343 aa10.59□□□□□ -0.71
CHD3-201ENST00000330494 KRT4P19013 534 aa10.59□□□□□ -0.71
CHD3-201ENST00000330494 RAD23BP54727 409 aa10.59□□□□□ -0.71
CHD3-201ENST00000330494 AP2B1P63010 937 aa10.59□□□□□ -0.71
CHD3-201ENST00000330494 BEX3Q00994 111 aa10.59□□□□□ -0.71
CHD3-201ENST00000330494 C11orf74Q86VG3 221 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms