RNA–Protein interactions for RNA: ENST00000329397.5

PTP4A3-201, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A3, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-201ENST00000329397 EEPD1Q7L9B9 569 aa18.25■□□□□ 0.51
PTP4A3-201ENST00000329397 UNC45BQ8IWX7 931 aa18.25■□□□□ 0.51
PTP4A3-201ENST00000329397 LRMDAQ9H2I8 198 aa18.25■□□□□ 0.51
PTP4A3-201ENST00000329397 CYP39A1Q9NYL5 469 aa18.25■□□□□ 0.51
PTP4A3-201ENST00000329397 ZNRF3Q9ULT6 936 aa18.25■□□□□ 0.51
PTP4A3-201ENST00000329397 POLIQ9UNA4 740 aa18.25■□□□□ 0.51
PTP4A3-201ENST00000329397 STYXL1Q9Y6J8 313 aa18.25■□□□□ 0.51
PTP4A3-201ENST00000329397 PEX11AO75192 247 aa18.24■□□□□ 0.51
PTP4A3-201ENST00000329397 MAP3K6O95382 1288 aa18.24■□□□□ 0.51
PTP4A3-201ENST00000329397 MARK3P27448 753 aa18.24■□□□□ 0.51
PTP4A3-201ENST00000329397 ZNF132P52740 706 aa18.24■□□□□ 0.51
PTP4A3-201ENST00000329397 RTP1P59025 263 aa18.24■□□□□ 0.51
PTP4A3-201ENST00000329397 BASP1P80723 227 aaKnown RBP18.24■□□□□ 0.51
PTP4A3-201ENST00000329397 PTPN20Q4JDL3 420 aa18.24■□□□□ 0.51
PTP4A3-201ENST00000329397 RAB6CQ53S08 254 aa18.24■□□□□ 0.51
PTP4A3-201ENST00000329397 RFWD3Q6PCD5 774 aa18.24■□□□□ 0.51
PTP4A3-201ENST00000329397 IGDCC3Q8IVU1 814 aa18.24■□□□□ 0.51
PTP4A3-201ENST00000329397 FAM71DQ8N9W8 422 aa18.24■□□□□ 0.51
PTP4A3-201ENST00000329397 SLC7A3Q8WY07 619 aa18.24■□□□□ 0.51
PTP4A3-201ENST00000329397 RAB6CQ9H0N0 254 aa18.24■□□□□ 0.51
PTP4A3-201ENST00000329397 MAGEB2O15479 319 aa18.24■□□□□ 0.51
PTP4A3-201ENST00000329397 NEBLO76041 1014 aa18.24■□□□□ 0.51
PTP4A3-201ENST00000329397 ASS1P00966 412 aaKnown RBP18.24■□□□□ 0.51
PTP4A3-201ENST00000329397 OATP04181 439 aa18.24■□□□□ 0.51
PTP4A3-201ENST00000329397 SRGAP2CP0DJJ0 459 aa18.24■□□□□ 0.51
PTP4A3-201ENST00000329397 RPL22P35268 128 aaKnown RBP18.24■□□□□ 0.51
PTP4A3-201ENST00000329397 GCLCP48506 637 aaPredicted RBP18.24■□□□□ 0.51
PTP4A3-201ENST00000329397 GEMIN4P57678 1058 aaKnown RBP18.24■□□□□ 0.51
PTP4A3-201ENST00000329397 SESN3P58005 492 aa18.24■□□□□ 0.51
PTP4A3-201ENST00000329397 INHBEP58166 350 aa18.24■□□□□ 0.51
PTP4A3-201ENST00000329397 CCDC15Q0P6D6 951 aa18.24■□□□□ 0.51
PTP4A3-201ENST00000329397 C11orf91Q3C1V1 193 aa18.24■□□□□ 0.51
PTP4A3-201ENST00000329397 DPH6Q7L8W6 267 aa18.24■□□□□ 0.51
PTP4A3-201ENST00000329397 LRRC6Q86X45 466 aa18.24■□□□□ 0.51
PTP4A3-201ENST00000329397 MICAL1Q8TDZ2 1067 aa18.24■□□□□ 0.51
PTP4A3-201ENST00000329397 PCDH9Q9HC56 1237 aa18.24■□□□□ 0.51
PTP4A3-201ENST00000329397 MAP3K20Q9NYL2 800 aaKnown RBP18.24■□□□□ 0.51
PTP4A3-201ENST00000329397 KANSL3Q9P2N6 904 aa18.24■□□□□ 0.51
PTP4A3-201ENST00000329397 GJB1P08034 283 aa18.23■□□□□ 0.51
PTP4A3-201ENST00000329397 ABL2P42684 1182 aa18.23■□□□□ 0.51
PTP4A3-201ENST00000329397 ERFP50548 548 aa18.23■□□□□ 0.51
PTP4A3-201ENST00000329397 CDH8P55286 799 aa18.23■□□□□ 0.51
PTP4A3-201ENST00000329397 CRYMQ14894 314 aa18.23■□□□□ 0.51
PTP4A3-201ENST00000329397 TAF11Q15544 211 aa18.23■□□□□ 0.51
PTP4A3-201ENST00000329397 SEPT7Q16181 437 aaKnown RBP18.23■□□□□ 0.51
PTP4A3-201ENST00000329397 NPNTQ6UXI9 565 aa18.23■□□□□ 0.51
PTP4A3-201ENST00000329397 TDRPQ86YL5 185 aa18.23■□□□□ 0.51
PTP4A3-201ENST00000329397 SLC35B2Q8TB61 432 aa18.23■□□□□ 0.51
PTP4A3-201ENST00000329397 HSPH1Q92598 858 aa18.23■□□□□ 0.51
PTP4A3-201ENST00000329397 RAB3IPQ96QF0 476 aaPredicted RBP18.23■□□□□ 0.51
PTP4A3-201ENST00000329397 FBXO6Q9NRD1 293 aaPredicted RBP18.23■□□□□ 0.51
PTP4A3-201ENST00000329397 ZFP69BQ9UJL9 534 aa18.23■□□□□ 0.51
PTP4A3-201ENST00000329397 SMG5Q9UPR3 1016 aaKnown RBP18.23■□□□□ 0.51
PTP4A3-201ENST00000329397 NFASCO94856 1347 aa18.23■□□□□ 0.51
PTP4A3-201ENST00000329397 ADGRA2Q96PE1 1338 aa18.23■□□□□ 0.51
PTP4A3-201ENST00000329397 C3orf70A6NLC5 250 aaPredicted RBP18.23■□□□□ 0.51
PTP4A3-201ENST00000329397 ATP2A1O14983 1001 aa18.23■□□□□ 0.51
PTP4A3-201ENST00000329397 AVILO75366 819 aa18.23■□□□□ 0.51
PTP4A3-201ENST00000329397 LRCH4O75427 683 aa18.23■□□□□ 0.51
PTP4A3-201ENST00000329397 DPEP1P16444 411 aa18.23■□□□□ 0.51
PTP4A3-201ENST00000329397 SKIV2L2P42285 1042 aaKnown RBP18.23■□□□□ 0.51
PTP4A3-201ENST00000329397 NAMPTP43490 491 aa18.23■□□□□ 0.51
PTP4A3-201ENST00000329397 RAD23BP54727 409 aa18.23■□□□□ 0.51
PTP4A3-201ENST00000329397 NR1H3Q13133 447 aa18.23■□□□□ 0.51
PTP4A3-201ENST00000329397 CCDC142Q17RM4 750 aa18.23■□□□□ 0.51
PTP4A3-201ENST00000329397 TMEM35BQ8NCS4 154 aa18.23■□□□□ 0.51
PTP4A3-201ENST00000329397 NUDCD1Q96RS6 583 aa18.23■□□□□ 0.51
PTP4A3-201ENST00000329397 DHX33Q9H6R0 707 aaKnown RBP18.23■□□□□ 0.51
PTP4A3-201ENST00000329397 SHOC2Q9UQ13 582 aa18.23■□□□□ 0.51
PTP4A3-201ENST00000329397 CNTN6Q9UQ52 1028 aa18.23■□□□□ 0.51
PTP4A3-201ENST00000329397 FARP1Q9Y4F1 1045 aaPredicted RBP18.23■□□□□ 0.51
PTP4A3-201ENST00000329397 CALB1P05937 261 aa18.22■□□□□ 0.51
PTP4A3-201ENST00000329397 ITGAVP06756 1048 aa18.22■□□□□ 0.51
PTP4A3-201ENST00000329397 MTA1Q13330 715 aa18.22■□□□□ 0.51
PTP4A3-201ENST00000329397 EFHC2Q5JST6 749 aa18.22■□□□□ 0.51
PTP4A3-201ENST00000329397 THNSL1Q8IYQ7 743 aa18.22■□□□□ 0.51
PTP4A3-201ENST00000329397 LRRC71Q8N4P6 559 aa18.22■□□□□ 0.51
PTP4A3-201ENST00000329397 REPS2Q8NFH8 660 aa18.22■□□□□ 0.51
PTP4A3-201ENST00000329397 ZBED3Q96IU2 234 aaPredicted RBP18.22■□□□□ 0.51
PTP4A3-201ENST00000329397 ALDH3A1P30838 453 aa18.22■□□□□ 0.51
PTP4A3-201ENST00000329397 BACE1P56817 501 aa18.22■□□□□ 0.51
PTP4A3-201ENST00000329397 MMRN1Q13201 1228 aa18.22■□□□□ 0.51
PTP4A3-201ENST00000329397 PRKG1Q13976 671 aa18.22■□□□□ 0.51
PTP4A3-201ENST00000329397 ZC3H18Q86VM9 953 aaKnown RBP18.22■□□□□ 0.51
PTP4A3-201ENST00000329397 RSAD2Q8WXG1 361 aa18.22■□□□□ 0.51
PTP4A3-201ENST00000329397 NKD2Q969F2 451 aaPredicted RBP18.22■□□□□ 0.51
PTP4A3-201ENST00000329397 MIPEPQ99797 713 aa18.22■□□□□ 0.51
PTP4A3-201ENST00000329397 CALN1Q9BXU9 219 aa18.22■□□□□ 0.51
PTP4A3-201ENST00000329397 DENND2DQ9H6A0 471 aaPredicted RBP18.22■□□□□ 0.51
PTP4A3-201ENST00000329397 CFAP69A5D8W1 941 aa18.21■□□□□ 0.51
PTP4A3-201ENST00000329397 DKC1O60832 514 aaKnown RBP eCLIP18.21■□□□□ 0.51
PTP4A3-201ENST00000329397 STAM2O75886 525 aa18.21■□□□□ 0.51
PTP4A3-201ENST00000329397 FAM155BO75949 473 aa18.21■□□□□ 0.51
PTP4A3-201ENST00000329397 KRT19P08727 400 aa18.21■□□□□ 0.51
PTP4A3-201ENST00000329397 ARL2P36404 184 aa18.21■□□□□ 0.51
PTP4A3-201ENST00000329397 SLC25A11Q02978 314 aaKnown RBP18.21■□□□□ 0.51
PTP4A3-201ENST00000329397 MCL1Q07820 350 aa18.21■□□□□ 0.51
PTP4A3-201ENST00000329397 PPP1R15BQ5SWA1 713 aa18.21■□□□□ 0.51
PTP4A3-201ENST00000329397 SLFN12LQ6IEE8 588 aa18.21■□□□□ 0.51
PTP4A3-201ENST00000329397 DRICH1Q6PGQ1 229 aaPredicted RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms