RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 MSS51Q4VC12 460 aa14.76□□□□□ -0.05
ATP2C1-201ENST00000328560 FNBP1LQ5T0N5 605 aa14.76□□□□□ -0.05
ATP2C1-201ENST00000328560 ACO2Q99798 780 aaKnown RBP14.76□□□□□ -0.05
ATP2C1-201ENST00000328560 PLCD4Q9BRC7 762 aa14.76□□□□□ -0.05
ATP2C1-201ENST00000328560 MAK16Q9BXY0 300 aaKnown RBP14.76□□□□□ -0.05
ATP2C1-201ENST00000328560 FOXP3Q9BZS1 431 aa14.76□□□□□ -0.05
ATP2C1-201ENST00000328560 MYLK2Q9H1R3 596 aa14.76□□□□□ -0.05
ATP2C1-201ENST00000328560 R3HDMLQ9H3Y0 253 aa14.76□□□□□ -0.05
ATP2C1-201ENST00000328560 DDX56Q9NY93 547 aaKnown RBP14.76□□□□□ -0.05
ATP2C1-201ENST00000328560 ZNF112Q9UJU3 913 aa14.76□□□□□ -0.05
ATP2C1-201ENST00000328560 DCTN4Q9UJW0 460 aa14.76□□□□□ -0.05
ATP2C1-201ENST00000328560 GRID1Q9ULK0 1009 aa14.76□□□□□ -0.05
ATP2C1-201ENST00000328560 FZD9O00144 591 aa14.75□□□□□ -0.05
ATP2C1-201ENST00000328560 ECM2O94769 699 aaPredicted RBP14.75□□□□□ -0.05
ATP2C1-201ENST00000328560 ATG7O95352 703 aa14.75□□□□□ -0.05
ATP2C1-201ENST00000328560 ASMTLO95671 621 aa14.75□□□□□ -0.05
ATP2C1-201ENST00000328560 ABHD2P08910 425 aa14.75□□□□□ -0.05
ATP2C1-201ENST00000328560 POLR2BP30876 1174 aaKnown RBP14.75□□□□□ -0.05
ATP2C1-201ENST00000328560 CDO1Q16878 200 aa14.75□□□□□ -0.05
ATP2C1-201ENST00000328560 HSDL1Q3SXM5 330 aa14.75□□□□□ -0.05
ATP2C1-201ENST00000328560 ZPBP2Q6X784 338 aa14.75□□□□□ -0.05
ATP2C1-201ENST00000328560 DCPSQ96C86 337 aaKnown RBP14.75□□□□□ -0.05
ATP2C1-201ENST00000328560 ANKRD36BP1Q96IX9 119 aa14.75□□□□□ -0.05
ATP2C1-201ENST00000328560 PCDH9Q9HC56 1237 aa14.75□□□□□ -0.05
ATP2C1-201ENST00000328560 RGS17Q9UGC6 210 aaPredicted RBP14.75□□□□□ -0.05
ATP2C1-201ENST00000328560 HAO1Q9UJM8 370 aa14.75□□□□□ -0.05
ATP2C1-201ENST00000328560 TCRBV7S3A2A0A539 114 aa14.75□□□□□ -0.05
ATP2C1-201ENST00000328560 ALOX15BO15296 676 aa14.75□□□□□ -0.05
ATP2C1-201ENST00000328560 LRCH4O75427 683 aa14.75□□□□□ -0.05
ATP2C1-201ENST00000328560 GRAP2O75791 330 aa14.75□□□□□ -0.05
ATP2C1-201ENST00000328560 LSM8O95777 96 aaKnown RBP14.75□□□□□ -0.05
ATP2C1-201ENST00000328560 CLCN3P51790 818 aa14.75□□□□□ -0.05
ATP2C1-201ENST00000328560 EFNA5P52803 228 aa14.75□□□□□ -0.05
ATP2C1-201ENST00000328560 OVGP1Q12889 678 aa14.75□□□□□ -0.05
ATP2C1-201ENST00000328560 PPP1R2P3Q6NXS1 205 aa14.75□□□□□ -0.05
ATP2C1-201ENST00000328560 KIAA0319LQ8IZA0 1049 aa14.75□□□□□ -0.05
ATP2C1-201ENST00000328560 RIBC1Q8N443 379 aaPredicted RBP14.75□□□□□ -0.05
ATP2C1-201ENST00000328560 UBA3Q8TBC4 463 aa14.75□□□□□ -0.05
ATP2C1-201ENST00000328560 LRRC37BQ96QE4 947 aa14.75□□□□□ -0.05
ATP2C1-201ENST00000328560 BTBD7Q9P203 1132 aa14.75□□□□□ -0.05
ATP2C1-201ENST00000328560 PRKAG3Q9UGI9 489 aa14.75□□□□□ -0.05
ATP2C1-201ENST00000328560 CYTH4Q9UIA0 394 aa14.75□□□□□ -0.05
ATP2C1-201ENST00000328560 CHMP2BQ9UQN3 213 aa14.75□□□□□ -0.05
ATP2C1-201ENST00000328560 MAFO75444 373 aaPredicted RBP14.75□□□□□ -0.05
ATP2C1-201ENST00000328560 RPL22P35268 128 aaKnown RBP14.75□□□□□ -0.05
ATP2C1-201ENST00000328560 MSH2P43246 934 aa14.75□□□□□ -0.05
ATP2C1-201ENST00000328560 ZNF667Q5HYK9 610 aa14.75□□□□□ -0.05
ATP2C1-201ENST00000328560 UNC45BQ8IWX7 931 aa14.75□□□□□ -0.05
ATP2C1-201ENST00000328560 FBXO36Q8NEA4 188 aa14.75□□□□□ -0.05
ATP2C1-201ENST00000328560 CPXM1Q96SM3 734 aa14.75□□□□□ -0.05
ATP2C1-201ENST00000328560 CXorf56Q9H5V9 222 aa14.75□□□□□ -0.05
ATP2C1-201ENST00000328560 EURLQ9NYK6 297 aa14.75□□□□□ -0.05
ATP2C1-201ENST00000328560 PSMC3IPQ9P2W1 217 aaPredicted RBP14.75□□□□□ -0.05
ATP2C1-201ENST00000328560 ARL4CP56559 192 aa14.74□□□□□ -0.05
ATP2C1-201ENST00000328560 GPX6P59796 221 aa14.74□□□□□ -0.05
ATP2C1-201ENST00000328560 NR1H3Q13133 447 aa14.74□□□□□ -0.05
ATP2C1-201ENST00000328560 TARBP2Q15633 366 aaKnown RBP14.74□□□□□ -0.05
ATP2C1-201ENST00000328560 LRRC38Q5VT99 294 aa14.74□□□□□ -0.05
ATP2C1-201ENST00000328560 NPNTQ6UXI9 565 aa14.74□□□□□ -0.05
ATP2C1-201ENST00000328560 LRRN4Q8WUT4 740 aa14.74□□□□□ -0.05
ATP2C1-201ENST00000328560 NPHS2Q9NP85 383 aa14.74□□□□□ -0.05
ATP2C1-201ENST00000328560 DRG1Q9Y295 367 aaKnown RBP14.74□□□□□ -0.05
ATP2C1-201ENST00000328560 ACTL7BQ9Y614 415 aa14.74□□□□□ -0.05
ATP2C1-201ENST00000328560 SOWAHBA6NEL2 793 aa14.74□□□□□ -0.05
ATP2C1-201ENST00000328560 ANP32DO95626 131 aa14.74□□□□□ -0.05
ATP2C1-201ENST00000328560 EIF4BP23588 611 aaKnown RBP14.74□□□□□ -0.05
ATP2C1-201ENST00000328560 ADRA1DP25100 572 aa14.74□□□□□ -0.05
ATP2C1-201ENST00000328560 EIF3EP60228 445 aaKnown RBP14.74□□□□□ -0.05
ATP2C1-201ENST00000328560 MMRN1Q13201 1228 aa14.74□□□□□ -0.05
ATP2C1-201ENST00000328560 R3HDM1Q15032 1099 aaKnown RBP14.74□□□□□ -0.05
ATP2C1-201ENST00000328560 ATF7IP2Q5U623 682 aa14.74□□□□□ -0.05
ATP2C1-201ENST00000328560 RELL1Q8IUW5 271 aa14.74□□□□□ -0.05
ATP2C1-201ENST00000328560 ARFGAP1Q8N6T3 406 aa14.74□□□□□ -0.05
ATP2C1-201ENST00000328560 KCNV2Q8TDN2 545 aa14.74□□□□□ -0.05
ATP2C1-201ENST00000328560 CPT1BQ92523 772 aa14.74□□□□□ -0.05
ATP2C1-201ENST00000328560 GPRC5DQ9NZD1 345 aa14.74□□□□□ -0.05
ATP2C1-201ENST00000328560 HMGXB4Q9UGU5 601 aa14.74□□□□□ -0.05
ATP2C1-201ENST00000328560 XPO7Q9UIA9 1087 aaKnown RBP14.74□□□□□ -0.05
ATP2C1-201ENST00000328560 MCM8Q9UJA3 840 aa14.74□□□□□ -0.05
ATP2C1-201ENST00000328560 SHOC2Q9UQ13 582 aa14.74□□□□□ -0.05
ATP2C1-201ENST00000328560 RNF8O76064 485 aa14.74□□□□□ -0.05
ATP2C1-201ENST00000328560 ITGAVP06756 1048 aa14.74□□□□□ -0.05
ATP2C1-201ENST00000328560 RBP3P10745 1247 aa14.74□□□□□ -0.05
ATP2C1-201ENST00000328560 ASPAP45381 313 aa14.74□□□□□ -0.05
ATP2C1-201ENST00000328560 AP3M2P53677 418 aa14.74□□□□□ -0.05
ATP2C1-201ENST00000328560 CLNS1AP54105 237 aaKnown RBP14.74□□□□□ -0.05
ATP2C1-201ENST00000328560 GEMIN4P57678 1058 aaKnown RBP14.74□□□□□ -0.05
ATP2C1-201ENST00000328560 YWHAEP62258 255 aaKnown RBP14.74□□□□□ -0.05
ATP2C1-201ENST00000328560 SCYL2Q6P3W7 929 aa14.74□□□□□ -0.05
ATP2C1-201ENST00000328560 NSMCE1Q8WV22 266 aa14.74□□□□□ -0.05
ATP2C1-201ENST00000328560 COPS5Q92905 334 aa14.74□□□□□ -0.05
ATP2C1-201ENST00000328560 NKD2Q969F2 451 aaPredicted RBP14.74□□□□□ -0.05
ATP2C1-201ENST00000328560 GRAMD1AQ96CP6 724 aa14.74□□□□□ -0.05
ATP2C1-201ENST00000328560 SMYD3Q9H7B4 428 aa14.74□□□□□ -0.05
ATP2C1-201ENST00000328560 KRT7P08729 469 aa14.73□□□□□ -0.05
ATP2C1-201ENST00000328560 HOXC6P09630 235 aa14.73□□□□□ -0.05
ATP2C1-201ENST00000328560 KDELR1P24390 212 aa14.73□□□□□ -0.05
ATP2C1-201ENST00000328560 ALDH3A1P30838 453 aa14.73□□□□□ -0.05
ATP2C1-201ENST00000328560 ICAM3P32942 547 aa14.73□□□□□ -0.05
ATP2C1-201ENST00000328560 PHBP35232 272 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms