RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 TKTP29401 623 aaKnown RBP19.89■□□□□ 0.77
EXOSC3-201ENST00000327304 RABGGTBP53611 331 aa19.89■□□□□ 0.77
EXOSC3-201ENST00000327304 GPC5P78333 572 aa19.89■□□□□ 0.77
EXOSC3-201ENST00000327304 ITIH3Q06033 890 aa19.89■□□□□ 0.77
EXOSC3-201ENST00000327304 FUT10Q6P4F1 479 aa19.89■□□□□ 0.77
EXOSC3-201ENST00000327304 ACOT1Q86TX2 421 aa19.89■□□□□ 0.77
EXOSC3-201ENST00000327304 UNC93AQ86WB7 457 aa19.89■□□□□ 0.77
EXOSC3-201ENST00000327304 TFAP2BQ92481 460 aa19.89■□□□□ 0.77
EXOSC3-201ENST00000327304 IGSF21Q96ID5 467 aa19.89■□□□□ 0.77
EXOSC3-201ENST00000327304 UBE2OQ9C0C9 1292 aaKnown RBP19.89■□□□□ 0.77
EXOSC3-201ENST00000327304 STXBP5LQ9Y2K9 1186 aa19.89■□□□□ 0.77
EXOSC3-201ENST00000327304 TNRC18O15417 2968 aaPredicted RBP19.89■□□□□ 0.77
EXOSC3-201ENST00000327304 SF3B1O75533 1304 aaKnown RBP eCLIP19.89■□□□□ 0.77
EXOSC3-201ENST00000327304 ZNF185O15231 689 aa19.88■□□□□ 0.77
EXOSC3-201ENST00000327304 TRAPPC3O43617 180 aa19.88■□□□□ 0.77
EXOSC3-201ENST00000327304 NCK2O43639 380 aa19.88■□□□□ 0.77
EXOSC3-201ENST00000327304 PAEPP09466 180 aa19.88■□□□□ 0.77
EXOSC3-201ENST00000327304 FAM163BP0C2L3 166 aa19.88■□□□□ 0.77
EXOSC3-201ENST00000327304 H2AFXP16104 143 aaPredicted RBP19.88■□□□□ 0.77
EXOSC3-201ENST00000327304 ACAT1P24752 427 aaKnown RBP19.88■□□□□ 0.77
EXOSC3-201ENST00000327304 BRD2P25440 801 aaKnown RBP19.88■□□□□ 0.77
EXOSC3-201ENST00000327304 FAM171A1Q5VUB5 890 aa19.88■□□□□ 0.77
EXOSC3-201ENST00000327304 SLC39A11Q8N1S5 342 aa19.88■□□□□ 0.77
EXOSC3-201ENST00000327304 UBE2Q2Q8WVN8 375 aa19.88■□□□□ 0.77
EXOSC3-201ENST00000327304 CAPZA3Q96KX2 299 aa19.88■□□□□ 0.77
EXOSC3-201ENST00000327304 B3GALT6Q96L58 329 aa19.88■□□□□ 0.77
EXOSC3-201ENST00000327304 LPIN3Q9BQK8 851 aa19.88■□□□□ 0.77
EXOSC3-201ENST00000327304 RTP3Q9BQQ7 232 aa19.88■□□□□ 0.77
EXOSC3-201ENST00000327304 VN1R3Q9BXE9 311 aa19.88■□□□□ 0.77
EXOSC3-201ENST00000327304 DDX43Q9NXZ2 648 aaKnown RBP19.88■□□□□ 0.77
EXOSC3-201ENST00000327304 DSEQ9UL01 958 aa19.88■□□□□ 0.77
EXOSC3-201ENST00000327304 VWA8A3KMH1 1905 aa19.88■□□□□ 0.77
EXOSC3-201ENST00000327304 THAP12O43422 761 aa19.88■□□□□ 0.77
EXOSC3-201ENST00000327304 CD19P15391 556 aa19.88■□□□□ 0.77
EXOSC3-201ENST00000327304 TYMPP19971 482 aa19.88■□□□□ 0.77
EXOSC3-201ENST00000327304 ACAD10Q6JQN1 1059 aa19.88■□□□□ 0.77
EXOSC3-201ENST00000327304 METTL23Q86XA0 190 aa19.88■□□□□ 0.77
EXOSC3-201ENST00000327304 COG1Q8WTW3 980 aa19.88■□□□□ 0.77
EXOSC3-201ENST00000327304 ARHGEF26Q96DR7 871 aa19.88■□□□□ 0.77
EXOSC3-201ENST00000327304 EFEMP2O95967 443 aa19.87■□□□□ 0.77
EXOSC3-201ENST00000327304 CFHP08603 1231 aa19.87■□□□□ 0.77
EXOSC3-201ENST00000327304 SSTR3P32745 418 aaPredicted RBP19.87■□□□□ 0.77
EXOSC3-201ENST00000327304 LHX1P48742 406 aa19.87■□□□□ 0.77
EXOSC3-201ENST00000327304 RPS6KA1Q15418 735 aa19.87■□□□□ 0.77
EXOSC3-201ENST00000327304 CCDC142Q17RM4 750 aa19.87■□□□□ 0.77
EXOSC3-201ENST00000327304 CLEC16AQ2KHT3 1053 aa19.87■□□□□ 0.77
EXOSC3-201ENST00000327304 KIAA0319Q5VV43 1072 aa19.87■□□□□ 0.77
EXOSC3-201ENST00000327304 OVOS1Q6IE37 1185 aa19.87■□□□□ 0.77
EXOSC3-201ENST00000327304 TAS1R1Q7RTX1 841 aa19.87■□□□□ 0.77
EXOSC3-201ENST00000327304 C12orf29Q8N999 325 aa19.87■□□□□ 0.77
EXOSC3-201ENST00000327304 HEXIM2Q96MH2 286 aaKnown RBP19.87■□□□□ 0.77
EXOSC3-201ENST00000327304 ABCB6Q9NP58 842 aa19.87■□□□□ 0.77
EXOSC3-201ENST00000327304 ARGLU1Q9NWB6 273 aaPredicted RBP19.87■□□□□ 0.77
EXOSC3-201ENST00000327304 RANBP2P49792 3224 aaKnown RBP19.87■□□□□ 0.77
EXOSC3-201ENST00000327304 ARHGEF37A1IGU5 675 aa19.86■□□□□ 0.77
EXOSC3-201ENST00000327304 ATP2C2O75185 946 aa19.86■□□□□ 0.77
EXOSC3-201ENST00000327304 MTA2O94776 668 aa19.86■□□□□ 0.77
EXOSC3-201ENST00000327304 MYOGP15173 224 aa19.86■□□□□ 0.77
EXOSC3-201ENST00000327304 FGFR3P22607 806 aa19.86■□□□□ 0.77
EXOSC3-201ENST00000327304 PAFAH1B1P43034 410 aa19.86■□□□□ 0.77
EXOSC3-201ENST00000327304 PSMC1P62191 440 aaKnown RBP19.86■□□□□ 0.77
EXOSC3-201ENST00000327304 PPP1R2P3Q6NXS1 205 aa19.86■□□□□ 0.77
EXOSC3-201ENST00000327304 TRIM72Q6ZMU5 477 aa19.86■□□□□ 0.77
EXOSC3-201ENST00000327304 MSANTD4Q8NCY6 345 aa19.86■□□□□ 0.77
EXOSC3-201ENST00000327304 SPATA18Q8TC71 538 aa19.86■□□□□ 0.77
EXOSC3-201ENST00000327304 ZNF606Q8WXB4 792 aa19.86■□□□□ 0.77
EXOSC3-201ENST00000327304 CLP1Q92989 425 aaKnown RBP19.86■□□□□ 0.77
EXOSC3-201ENST00000327304 OSGEPQ9NPF4 335 aa19.86■□□□□ 0.77
EXOSC3-201ENST00000327304 SPG21Q9NZD8 308 aa19.86■□□□□ 0.77
EXOSC3-201ENST00000327304 PDE2AO00408 941 aaPredicted RBP19.86■□□□□ 0.77
EXOSC3-201ENST00000327304 SYN3O14994 580 aa19.86■□□□□ 0.77
EXOSC3-201ENST00000327304 TUBBP07437 444 aa19.86■□□□□ 0.77
EXOSC3-201ENST00000327304 UNGP13051 313 aaPredicted RBP19.86■□□□□ 0.77
EXOSC3-201ENST00000327304 ELAVL2Q12926 359 aaKnown RBP19.86■□□□□ 0.77
EXOSC3-201ENST00000327304 FBXO38Q6PIJ6 1188 aa19.86■□□□□ 0.77
EXOSC3-201ENST00000327304 PEX26Q7Z412 305 aa19.86■□□□□ 0.77
EXOSC3-201ENST00000327304 DAAM2Q86T65 1068 aa19.86■□□□□ 0.77
EXOSC3-201ENST00000327304 CEP57Q86XR8 500 aa19.86■□□□□ 0.77
EXOSC3-201ENST00000327304 CRYBG2Q8N1P7 616 aa19.86■□□□□ 0.77
EXOSC3-201ENST00000327304 GTF3C4Q9UKN8 822 aa19.86■□□□□ 0.77
EXOSC3-201ENST00000327304 FAM170AA1A519 330 aa19.85■□□□□ 0.77
EXOSC3-201ENST00000327304 BUB1BO60566 1050 aaPredicted RBP19.85■□□□□ 0.77
EXOSC3-201ENST00000327304 ARHGEF15O94989 841 aa19.85■□□□□ 0.77
EXOSC3-201ENST00000327304 CYP1A2P05177 515 aa19.85■□□□□ 0.77
EXOSC3-201ENST00000327304 VDRP11473 427 aa19.85■□□□□ 0.77
EXOSC3-201ENST00000327304 YWHAHQ04917 246 aaPredicted RBP19.85■□□□□ 0.77
EXOSC3-201ENST00000327304 CFAP221Q4G0U5 840 aa19.85■□□□□ 0.77
EXOSC3-201ENST00000327304 RTP2Q5QGT7 225 aa19.85■□□□□ 0.77
EXOSC3-201ENST00000327304 VARS2Q5ST30 1063 aaKnown RBP19.85■□□□□ 0.77
EXOSC3-201ENST00000327304 CCDC181Q5TID7 509 aa19.85■□□□□ 0.77
EXOSC3-201ENST00000327304 NT5DC3Q86UY8 548 aa19.85■□□□□ 0.77
EXOSC3-201ENST00000327304 RNF168Q8IYW5 571 aaPredicted RBP19.85■□□□□ 0.77
EXOSC3-201ENST00000327304 B3GALNT2Q8NCR0 500 aa19.85■□□□□ 0.77
EXOSC3-201ENST00000327304 OR10T2Q8NGX3 314 aa19.85■□□□□ 0.77
EXOSC3-201ENST00000327304 PBKQ96KB5 322 aa19.85■□□□□ 0.77
EXOSC3-201ENST00000327304 SYT15Q9BQS2 421 aa19.85■□□□□ 0.77
EXOSC3-201ENST00000327304 AAASQ9NRG9 546 aa19.85■□□□□ 0.77
EXOSC3-201ENST00000327304 FAM49BQ9NUQ9 324 aa19.85■□□□□ 0.77
EXOSC3-201ENST00000327304 CYP1A1P04798 512 aaPredicted RBP19.84■□□□□ 0.77
EXOSC3-201ENST00000327304 CXCR5P32302 372 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms