RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 TOM1L1O75674 476 aa20.89■□□□□ 0.94
SOX2-201ENST00000325404 ANP32DO95626 131 aa20.89■□□□□ 0.94
SOX2-201ENST00000325404 KRT7P08729 469 aa20.89■□□□□ 0.94
SOX2-201ENST00000325404 CCNG1P51959 295 aa20.89■□□□□ 0.94
SOX2-201ENST00000325404 ATP11AP98196 1134 aa20.89■□□□□ 0.94
SOX2-201ENST00000325404 PPIL2Q13356 520 aa20.89■□□□□ 0.94
SOX2-201ENST00000325404 ZBED8Q8IZ13 594 aa20.89■□□□□ 0.94
SOX2-201ENST00000325404 LRRC8CQ8TDW0 803 aa20.89■□□□□ 0.94
SOX2-201ENST00000325404 DHRS4Q9BTZ2 278 aa20.89■□□□□ 0.94
SOX2-201ENST00000325404 LHX5Q9H2C1 402 aa20.89■□□□□ 0.94
SOX2-201ENST00000325404 CISHQ9NSE2 258 aa20.89■□□□□ 0.94
SOX2-201ENST00000325404 DOCK5Q9H7D0 1870 aa20.89■□□□□ 0.93
SOX2-201ENST00000325404 LRRD1A4D1F6 860 aa20.89■□□□□ 0.93
SOX2-201ENST00000325404 E7ESA3 106 aa20.89■□□□□ 0.93
SOX2-201ENST00000325404 SPAG7O75391 227 aa20.89■□□□□ 0.93
SOX2-201ENST00000325404 CST3P01034 146 aaPredicted RBP20.89■□□□□ 0.93
SOX2-201ENST00000325404 EDN1P05305 212 aa20.89■□□□□ 0.93
SOX2-201ENST00000325404 ETS1P14921 441 aa20.89■□□□□ 0.93
SOX2-201ENST00000325404 POLR2BP30876 1174 aaKnown RBP20.89■□□□□ 0.93
SOX2-201ENST00000325404 SSTR3P32745 418 aaPredicted RBP20.89■□□□□ 0.93
SOX2-201ENST00000325404 YWHAEP62258 255 aaKnown RBP20.89■□□□□ 0.93
SOX2-201ENST00000325404 PDIA2Q13087 525 aaKnown RBP20.89■□□□□ 0.93
SOX2-201ENST00000325404 CAPSQ13938 189 aa20.89■□□□□ 0.93
SOX2-201ENST00000325404 FASTKD3Q14CZ7 662 aaKnown RBP20.89■□□□□ 0.93
SOX2-201ENST00000325404 HIF1AQ16665 826 aa20.89■□□□□ 0.93
SOX2-201ENST00000325404 DUOXA2Q1HG44 320 aa20.89■□□□□ 0.93
SOX2-201ENST00000325404 BBS12Q6ZW61 710 aa20.89■□□□□ 0.93
SOX2-201ENST00000325404 THNSL1Q8IYQ7 743 aa20.89■□□□□ 0.93
SOX2-201ENST00000325404 WDTC1Q8N5D0 677 aa20.89■□□□□ 0.93
SOX2-201ENST00000325404 STAMBPL1Q96FJ0 436 aa20.89■□□□□ 0.93
SOX2-201ENST00000325404 LOC285556D6RIA3 1793 aa20.89■□□□□ 0.93
SOX2-201ENST00000325404 ARL4CP56559 192 aa20.88■□□□□ 0.93
SOX2-201ENST00000325404 GPAT2Q6NUI2 795 aa20.88■□□□□ 0.93
SOX2-201ENST00000325404 MAB21L3Q8N8X9 362 aa20.88■□□□□ 0.93
SOX2-201ENST00000325404 ATP11CQ8NB49 1132 aa20.88■□□□□ 0.93
SOX2-201ENST00000325404 ALKBH8Q96BT7 664 aaKnown RBP20.88■□□□□ 0.93
SOX2-201ENST00000325404 FAXDC2Q96IV6 333 aa20.88■□□□□ 0.93
SOX2-201ENST00000325404 LRRC37BQ96QE4 947 aa20.88■□□□□ 0.93
SOX2-201ENST00000325404 PAIP2Q9BPZ3 127 aaKnown RBP20.88■□□□□ 0.93
SOX2-201ENST00000325404 MRPL4Q9BYD3 311 aaKnown RBP20.88■□□□□ 0.93
SOX2-201ENST00000325404 SPATC1LQ9H0A9 340 aa20.88■□□□□ 0.93
SOX2-201ENST00000325404 SIGLEC16A6NMB1 481 aa20.88■□□□□ 0.93
SOX2-201ENST00000325404 SGK1O00141 431 aa20.88■□□□□ 0.93
SOX2-201ENST00000325404 MAFO75444 373 aaPredicted RBP20.88■□□□□ 0.93
SOX2-201ENST00000325404 DNAJC3Q13217 504 aa20.88■□□□□ 0.93
SOX2-201ENST00000325404 FAM47EQ6ZV65 393 aa20.88■□□□□ 0.93
SOX2-201ENST00000325404 KIF2BQ8N4N8 673 aa20.88■□□□□ 0.93
SOX2-201ENST00000325404 MYLK2Q9H1R3 596 aa20.88■□□□□ 0.93
SOX2-201ENST00000325404 CYLDQ9NQC7 956 aa20.88■□□□□ 0.93
SOX2-201ENST00000325404 RABGEF1Q9UJ41 708 aa20.88■□□□□ 0.93
SOX2-201ENST00000325404 AGTPBP1Q9UPW5 1226 aa20.88■□□□□ 0.93
SOX2-201ENST00000325404 PEX10O60683 326 aa20.87■□□□□ 0.93
SOX2-201ENST00000325404 CA4P22748 312 aa20.87■□□□□ 0.93
SOX2-201ENST00000325404 BRD2P25440 801 aaKnown RBP20.87■□□□□ 0.93
SOX2-201ENST00000325404 RPA3P35244 121 aaPredicted RBP20.87■□□□□ 0.93
SOX2-201ENST00000325404 CBLBQ13191 982 aa20.87■□□□□ 0.93
SOX2-201ENST00000325404 KLHL38Q2WGJ6 581 aa20.87■□□□□ 0.93
SOX2-201ENST00000325404 HHATQ5VTY9 493 aa20.87■□□□□ 0.93
SOX2-201ENST00000325404 ADGRD1Q6QNK2 874 aa20.87■□□□□ 0.93
SOX2-201ENST00000325404 ZNF526Q8TF50 670 aaPredicted RBP20.87■□□□□ 0.93
SOX2-201ENST00000325404 ASCC2Q9H1I8 757 aaPredicted RBP20.87■□□□□ 0.93
SOX2-201ENST00000325404 ETNK1Q9HBU6 452 aa20.87■□□□□ 0.93
SOX2-201ENST00000325404 RPL26L1Q9UNX3 145 aaKnown RBP20.87■□□□□ 0.93
SOX2-201ENST00000325404 CHKBQ9Y259 395 aa20.87■□□□□ 0.93
SOX2-201ENST00000325404 A0A0G2JMZ2 1700 aa20.87■□□□□ 0.93
SOX2-201ENST00000325404 OGTO15294 1046 aa20.87■□□□□ 0.93
SOX2-201ENST00000325404 MSCO60682 206 aa20.87■□□□□ 0.93
SOX2-201ENST00000325404 GPX6P59796 221 aa20.87■□□□□ 0.93
SOX2-201ENST00000325404 MYL6P60660 151 aa20.87■□□□□ 0.93
SOX2-201ENST00000325404 SLC25A11Q02978 314 aaKnown RBP20.87■□□□□ 0.93
SOX2-201ENST00000325404 ADCY1Q08828 1119 aa20.87■□□□□ 0.93
SOX2-201ENST00000325404 CRYMQ14894 314 aa20.87■□□□□ 0.93
SOX2-201ENST00000325404 HADHQ16836 314 aaKnown RBP20.87■□□□□ 0.93
SOX2-201ENST00000325404 ACCSLQ4AC99 568 aa20.87■□□□□ 0.93
SOX2-201ENST00000325404 TXNRD3NBQ6F5E7 133 aa20.87■□□□□ 0.93
SOX2-201ENST00000325404 NAT8LQ8N9F0 302 aa20.87■□□□□ 0.93
SOX2-201ENST00000325404 OPTNQ96CV9 577 aa20.87■□□□□ 0.93
SOX2-201ENST00000325404 TMEM121Q9BTD3 319 aa20.87■□□□□ 0.93
SOX2-201ENST00000325404 BATF3Q9NR55 127 aa20.87■□□□□ 0.93
SOX2-201ENST00000325404 TRAFD1O14545 582 aaPredicted RBP20.86■□□□□ 0.93
SOX2-201ENST00000325404 HNRNPCL1O60812 293 aaKnown RBP20.86■□□□□ 0.93
SOX2-201ENST00000325404 GBP2P32456 591 aaPredicted RBP20.86■□□□□ 0.93
SOX2-201ENST00000325404 RASSF2P50749 326 aa20.86■□□□□ 0.93
SOX2-201ENST00000325404 PLCB3Q01970 1234 aa20.86■□□□□ 0.93
SOX2-201ENST00000325404 CDCA2Q69YH5 1023 aaPredicted RBP20.86■□□□□ 0.93
SOX2-201ENST00000325404 C10orf82Q8WW14 230 aa20.86■□□□□ 0.93
SOX2-201ENST00000325404 ACSS3Q9H6R3 686 aa20.86■□□□□ 0.93
SOX2-201ENST00000325404 WDR35Q9P2L0 1181 aa20.86■□□□□ 0.93
SOX2-201ENST00000325404 TM9SF1O15321 606 aa20.86■□□□□ 0.93
SOX2-201ENST00000325404 CLUHO75153 1309 aa20.86■□□□□ 0.93
SOX2-201ENST00000325404 WEE2P0C1S8 567 aa20.86■□□□□ 0.93
SOX2-201ENST00000325404 CNTN2Q02246 1040 aa20.86■□□□□ 0.93
SOX2-201ENST00000325404 SLC45A4Q5BKX6 768 aa20.86■□□□□ 0.93
SOX2-201ENST00000325404 FAM160B1Q5W0V3 765 aa20.86■□□□□ 0.93
SOX2-201ENST00000325404 NCAPG2Q86XI2 1143 aa20.86■□□□□ 0.93
SOX2-201ENST00000325404 VSIG1Q86XK7 387 aa20.86■□□□□ 0.93
SOX2-201ENST00000325404 NSMCE1Q8WV22 266 aa20.86■□□□□ 0.93
SOX2-201ENST00000325404 CPSF3Q9UKF6 684 aaKnown RBP20.86■□□□□ 0.93
SOX2-201ENST00000325404 GRID1Q9ULK0 1009 aa20.86■□□□□ 0.93
SOX2-201ENST00000325404 L3MBTL1Q9Y468 752 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms